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The map label for this gene is yfjD [C]

Identifier: 148267352

GI number: 148267352

Start: 965594

End: 966634

Strand: Direct

Name: yfjD [C]

Synonym: SaurJH9_0918

Alternate gene names: 148267352

Gene position: 965594-966634 (Clockwise)

Preceding gene: 148267350

Following gene: 148267353

Centisome position: 33.22

GC content: 32.76

Gene sequence:

>1041_bases
GTGATCATTGCCATAATTATATTGATATTTATTTCGTTTTTCTTTTCAGGAAGCGAGACGGCATTAACGGCTGCCAATAA
AACAAAATTTAAAACTGAAGCTGACAAAGGTGATAAAAAAGCAAAAGGCATTGTAAAGTTACTTGAAAAACCAAGTGAGT
TTATTACAACGATTCTAATTGGGAATAATGTCGCGAATATTTTATTACCAACACTTGTTACAATTATGGCTTTACGTTGG
GGGATTAGCGTTGGTATTGCATCAGCTGTTTTAACAGTTGTTATCATTTTGATTTCCGAAGTGATTCCCAAGTCTGTCGC
TGCAACATTTCCAGATAAAATAACAAGGCTTGTATATCCAATTATTAATATTTGTGTCATTGTGTTTCGCCCTATCACAT
TACTTTTAAATAAGTTGACGGACAGTATTAATCGAAGTTTATCTAAGGGTCAACCTCAAGAACATCAATTTTCAAAAGAA
GAATTTAAAACAATGTTAGCAATTGCTGGACATGAAGGTGCTTTAAATGAAATTGAGACGAGTAGGTTGGAAGGTGTCAT
TAATTTTGAAAATTTAAAAGTAAAAGATGTAGATACAACACCTAGAATTAATGTGACGGCATTTGCTTCAAATGCGACAT
ACGAAGAAGTTTATGAAACGGTTATGAATAAGCCATACACTAGATATCCAGTGTACGAGGGAGATATTGATAACATTATT
GGGGTGTTTCATTCTAAATATCTGTTGGCTTGGAGTAATAAAAAAGAAGATCAAATTACAAACTATTCAGCTAAGCCATT
ATTTGTGAATGAACACAATAAAGCTGAATGGGTATTACGTAAGATGACTATTTCTAGAAAACATTTAGCAATTGTGTTGG
ACGAATTTGGTGGTACCGAAGCGATAGTGTCACATGAAGACTTAATTGAAGAATTATTAGGTATGGAAATTGAAGATGAG
ATGGATAAAAAGGAAAAAGAAAAACTTTCTCAACAGCAAATTCAATTTCAACAACGGAAAAATCGCAACGTATCTATATA
A

Upstream 100 bases:

>100_bases
CTATTATATATAATGAATTTTAACTGGTTTATTAAACGAGAACGTCGGGAATTAAGTAACTACAATAAAAATAAGATATG
ACAATAAGGAGACTACACGC

Downstream 100 bases:

>100_bases
GGAGCGAACAGCTATGTGGAATAAGAATCGACTTACTCAAATGTTAAGTATTGAATATCCAATTATACAAGCAGGTATGG
CAGGAAGTACGACACCGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 346; Mature: 346

Protein sequence:

>346_residues
MIIAIIILIFISFFFSGSETALTAANKTKFKTEADKGDKKAKGIVKLLEKPSEFITTILIGNNVANILLPTLVTIMALRW
GISVGIASAVLTVVIILISEVIPKSVAATFPDKITRLVYPIINICVIVFRPITLLLNKLTDSINRSLSKGQPQEHQFSKE
EFKTMLAIAGHEGALNEIETSRLEGVINFENLKVKDVDTTPRINVTAFASNATYEEVYETVMNKPYTRYPVYEGDIDNII
GVFHSKYLLAWSNKKEDQITNYSAKPLFVNEHNKAEWVLRKMTISRKHLAIVLDEFGGTEAIVSHEDLIEELLGMEIEDE
MDKKEKEKLSQQQIQFQQRKNRNVSI

Sequences:

>Translated_346_residues
MIIAIIILIFISFFFSGSETALTAANKTKFKTEADKGDKKAKGIVKLLEKPSEFITTILIGNNVANILLPTLVTIMALRW
GISVGIASAVLTVVIILISEVIPKSVAATFPDKITRLVYPIINICVIVFRPITLLLNKLTDSINRSLSKGQPQEHQFSKE
EFKTMLAIAGHEGALNEIETSRLEGVINFENLKVKDVDTTPRINVTAFASNATYEEVYETVMNKPYTRYPVYEGDIDNII
GVFHSKYLLAWSNKKEDQITNYSAKPLFVNEHNKAEWVLRKMTISRKHLAIVLDEFGGTEAIVSHEDLIEELLGMEIEDE
MDKKEKEKLSQQQIQFQQRKNRNVSI
>Mature_346_residues
MIIAIIILIFISFFFSGSETALTAANKTKFKTEADKGDKKAKGIVKLLEKPSEFITTILIGNNVANILLPTLVTIMALRW
GISVGIASAVLTVVIILISEVIPKSVAATFPDKITRLVYPIINICVIVFRPITLLLNKLTDSINRSLSKGQPQEHQFSKE
EFKTMLAIAGHEGALNEIETSRLEGVINFENLKVKDVDTTPRINVTAFASNATYEEVYETVMNKPYTRYPVYEGDIDNII
GVFHSKYLLAWSNKKEDQITNYSAKPLFVNEHNKAEWVLRKMTISRKHLAIVLDEFGGTEAIVSHEDLIEELLGMEIEDE
MDKKEKEKLSQQQIQFQQRKNRNVSI

Specific function: Unknown

COG id: COG4536

COG function: function code P; Putative Mg2+ and Co2+ transporter CorB

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=351, Percent_Identity=27.3504273504274, Blast_Score=117, Evalue=2e-26,
Organism=Homo sapiens, GI40068053, Length=353, Percent_Identity=24.6458923512748, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI40068055, Length=353, Percent_Identity=24.6458923512748, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI94681046, Length=343, Percent_Identity=23.3236151603499, Blast_Score=67, Evalue=2e-11,
Organism=Escherichia coli, GI145693175, Length=316, Percent_Identity=30.0632911392405, Blast_Score=139, Evalue=3e-34,
Organism=Escherichia coli, GI1790664, Length=332, Percent_Identity=24.6987951807229, Blast_Score=97, Evalue=2e-21,
Organism=Escherichia coli, GI1786879, Length=170, Percent_Identity=27.0588235294118, Blast_Score=82, Evalue=6e-17,
Organism=Escherichia coli, GI87082033, Length=182, Percent_Identity=29.1208791208791, Blast_Score=62, Evalue=6e-11,
Organism=Saccharomyces cerevisiae, GI6324512, Length=330, Percent_Identity=23.030303030303, Blast_Score=75, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016169
- InterPro:   IPR000644
- InterPro:   IPR002550
- InterPro:   IPR005170 [H]

Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 39018; Mature: 39018

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIAIIILIFISFFFSGSETALTAANKTKFKTEADKGDKKAKGIVKLLEKPSEFITTILI
CHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHC
GNNVANILLPTLVTIMALRWGISVGIASAVLTVVIILISEVIPKSVAATFPDKITRLVYP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
IINICVIVFRPITLLLNKLTDSINRSLSKGQPQEHQFSKEEFKTMLAIAGHEGALNEIET
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHCCCCCCHHHHHH
SRLEGVINFENLKVKDVDTTPRINVTAFASNATYEEVYETVMNKPYTRYPVYEGDIDNII
HHHCCEEEECCEEEEECCCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCHHHHH
GVFHSKYLLAWSNKKEDQITNYSAKPLFVNEHNKAEWVLRKMTISRKHLAIVLDEFGGTE
HHHHHHEEEEECCCCCHHHCCCCCCCEEEECCCHHHHHHHHHHHCHHHHEEEEECCCCCH
AIVSHEDLIEELLGMEIEDEMDKKEKEKLSQQQIQFQQRKNRNVSI
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MIIAIIILIFISFFFSGSETALTAANKTKFKTEADKGDKKAKGIVKLLEKPSEFITTILI
CHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHC
GNNVANILLPTLVTIMALRWGISVGIASAVLTVVIILISEVIPKSVAATFPDKITRLVYP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
IINICVIVFRPITLLLNKLTDSINRSLSKGQPQEHQFSKEEFKTMLAIAGHEGALNEIET
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHCCCCCCHHHHHH
SRLEGVINFENLKVKDVDTTPRINVTAFASNATYEEVYETVMNKPYTRYPVYEGDIDNII
HHHCCEEEECCEEEEECCCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCHHHHH
GVFHSKYLLAWSNKKEDQITNYSAKPLFVNEHNKAEWVLRKMTISRKHLAIVLDEFGGTE
HHHHHHEEEEECCCCCHHHCCCCCCCEEEECCCHHHHHHHHHHHCHHHHEEEEECCCCCH
AIVSHEDLIEELLGMEIEDEMDKKEKEKLSQQQIQFQQRKNRNVSI
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]