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The map label for this gene is ywoC [H]

Identifier: 148266612

GI number: 148266612

Start: 206060

End: 206617

Strand: Reverse

Name: ywoC [H]

Synonym: SaurJH9_0172

Alternate gene names: 148266612

Gene position: 206617-206060 (Counterclockwise)

Preceding gene: 148266613

Following gene: 148266611

Centisome position: 7.11

GC content: 35.3

Gene sequence:

>558_bases
ATGATTAATTTTAATAAAACCGCTTTAGTGTTAATCGACCTGCAAGAAGGTATACTTAAGATGGATTATGCGCCACATAC
AGCTGAAAATGTCGTTCAAAACGCTAATAAATTAATAGATGTTTTTAGAAAAAACAATGGCTTTATCGCTTTTGTTCGCG
TGAATTTCTATGATGGTAAAGATGTATTGCAACCAAATGCAATGATCTCATTACCACCAAAAGAAGGCGACGACTACAGT
CGTTTCCATCATTTATTAGACAAGAGAGATGACGATTTTGTCATAGACAAACGACATTTTAGTGCATTTGTAGGAACAGA
TTTGGACTTACAATTGCGACGTCGAGGAATTGATACGATTGTTCTTGGTGGTGTCGCAACGCATATTGGCGTAGATACGA
CAGCGCGAGATGCCTATCAATTAAACTACAATCAGTTTTTTGTTACAGATATGATGAGTGCACAAAACGAAACGCTACAT
CAATTTCCAATAGATAATGTATTCCCATTAATGGGACAAACAATAACTACAAACGACTTTCTAAATATATTGAACTAA

Upstream 100 bases:

>100_bases
TATCGCTAAAGCTTTTTCACAACAAAATAAATAATTTCATCGTATACAGGGTATAAGTTTAAGCGAATACTTTATTAAAC
GAAAAGGACTCTGATATAAG

Downstream 100 bases:

>100_bases
ACATACACTTACCCCCTTCGATCATGTTGAAGGGGGTATCTTTATTTTACAAAGTATTAATACGTCGGGTTGTCTAACCT
CCTATCTATAAACTTAGCCT

Product: isochorismatase hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MINFNKTALVLIDLQEGILKMDYAPHTAENVVQNANKLIDVFRKNNGFIAFVRVNFYDGKDVLQPNAMISLPPKEGDDYS
RFHHLLDKRDDDFVIDKRHFSAFVGTDLDLQLRRRGIDTIVLGGVATHIGVDTTARDAYQLNYNQFFVTDMMSAQNETLH
QFPIDNVFPLMGQTITTNDFLNILN

Sequences:

>Translated_185_residues
MINFNKTALVLIDLQEGILKMDYAPHTAENVVQNANKLIDVFRKNNGFIAFVRVNFYDGKDVLQPNAMISLPPKEGDDYS
RFHHLLDKRDDDFVIDKRHFSAFVGTDLDLQLRRRGIDTIVLGGVATHIGVDTTARDAYQLNYNQFFVTDMMSAQNETLH
QFPIDNVFPLMGQTITTNDFLNILN
>Mature_185_residues
MINFNKTALVLIDLQEGILKMDYAPHTAENVVQNANKLIDVFRKNNGFIAFVRVNFYDGKDVLQPNAMISLPPKEGDDYS
RFHHLLDKRDDDFVIDKRHFSAFVGTDLDLQLRRRGIDTIVLGGVATHIGVDTTARDAYQLNYNQFFVTDMMSAQNETLH
QFPIDNVFPLMGQTITTNDFLNILN

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the isochorismatase family [H]

Homologues:

Organism=Escherichia coli, GI87081992, Length=189, Percent_Identity=40.7407407407407, Blast_Score=139, Evalue=1e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016291
- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: NA

Molecular weight: Translated: 21125; Mature: 21125

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINFNKTALVLIDLQEGILKMDYAPHTAENVVQNANKLIDVFRKNNGFIAFVRVNFYDGK
CCCCCCEEEEEEECCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCC
DVLQPNAMISLPPKEGDDYSRFHHLLDKRDDDFVIDKRHFSAFVGTDLDLQLRRRGIDTI
CCCCCCCEEEECCCCCCHHHHHHHHHCCCCCCEEEEHHHHHHHHCCCCCHHHHHCCCCEE
VLGGVATHIGVDTTARDAYQLNYNQFFVTDMMSAQNETLHQFPIDNVFPLMGQTITTNDF
EECCCHHHCCCCCCCCCEEEECCCEEEEEHHHHCCCCCHHHCCCCCHHHHCCCEECCHHH
LNILN
HHHCC
>Mature Secondary Structure
MINFNKTALVLIDLQEGILKMDYAPHTAENVVQNANKLIDVFRKNNGFIAFVRVNFYDGK
CCCCCCEEEEEEECCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCC
DVLQPNAMISLPPKEGDDYSRFHHLLDKRDDDFVIDKRHFSAFVGTDLDLQLRRRGIDTI
CCCCCCCEEEECCCCCCHHHHHHHHHCCCCCCEEEEHHHHHHHHCCCCCHHHHHCCCCEE
VLGGVATHIGVDTTARDAYQLNYNQFFVTDMMSAQNETLHQFPIDNVFPLMGQTITTNDF
EECCCHHHCCCCCCCCCEEEECCCEEEEEHHHHCCCCCHHHCCCCCHHHHCCCEECCHHH
LNILN
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]