Definition | Acidiphilium cryptum JF-5 plasmid pACRY01, complete sequence. |
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Accession | NC_009467 |
Length | 203,589 |
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The map label for this gene is 148243736
Identifier: 148243736
GI number: 148243736
Start: 123296
End: 123841
Strand: Direct
Name: 148243736
Synonym: Acry_3213
Alternate gene names: NA
Gene position: 123296-123841 (Clockwise)
Preceding gene: 148243734
Following gene: 148243738
Centisome position: 60.56
GC content: 64.65
Gene sequence:
>546_bases GTGGAGTGCATCGGCAAGGGCAAGGCCAGGACGCGATTCGAATTCGGCGTGAAGGTCTCCATCGCCACCACCAACGCCGC CGCACCCGGCGGTCAGTTCGTTCTCGGCATGCAGAGCCAGCCGGGAAATCCCTATGACGGCCACACCCTGGCCGGCCAGA TCGAGCAGGTCGAGCGGATCACCGGCGTTGCCGTCGCCCGCGCCTATGTCGACCGCGGCTATCGCGGCCACGGCGTCGAA GCCGAGGGCAGAAGGATCTTCATCTCCCGCCAGAAACGCGGCATCACCCCCACCATCCGCCGCGAGTTGCGCCGACGCAC AGCCATCGAACCCGTCATCGGCCACATGAAGACCGATGGCCATCTGGGGCGAAACTTCCTGCTCGGCTTCGACGGTGATG CCATCAACGCCATCCTTGCCGGCGCCGGCCACAACCTCCGGCTGCTCCGCAGATGGCTGATCAGGCTTCTTTGCGCCATC TTCACATGGCTCTCGGCCGCAAGACCCTCTCCAGACCTTCGCCTACCGAACTACCACATCGCTTAA
Upstream 100 bases:
>100_bases TGCCACTCACACACGAAATTCAGGACACTGCCATCGCCTGCTTCGCCAGAAGCGCTCCGACCGCGGTGCCGACAAGCTCT ATTCCCTGCACGCGCCTGAG
Downstream 100 bases:
>100_bases TTCACAGACGACTAGGATAGAATCCACCGGAGACATGGCACATGCTTGCGGAGTCAATGATGGTGATTGTGGCGCGGTCG CTGACTGTGATCATGCGATG
Product: transposase, IS4 family protein
Products: NA
Alternate protein names: Transposase; ISXoo4 Transposase; ISPg7 Transposase; ISXoo5 Transposase; Transposase Protein; ISRSO9-Transposase Protein; Transposase IS4 Family; Transposase Of Disrupted Insertion Sequence; Transposase IS5 Family; IS5 Family Transposase
Number of amino acids: Translated: 181; Mature: 181
Protein sequence:
>181_residues MECIGKGKARTRFEFGVKVSIATTNAAAPGGQFVLGMQSQPGNPYDGHTLAGQIEQVERITGVAVARAYVDRGYRGHGVE AEGRRIFISRQKRGITPTIRRELRRRTAIEPVIGHMKTDGHLGRNFLLGFDGDAINAILAGAGHNLRLLRRWLIRLLCAI FTWLSAARPSPDLRLPNYHIA
Sequences:
>Translated_181_residues MECIGKGKARTRFEFGVKVSIATTNAAAPGGQFVLGMQSQPGNPYDGHTLAGQIEQVERITGVAVARAYVDRGYRGHGVE AEGRRIFISRQKRGITPTIRRELRRRTAIEPVIGHMKTDGHLGRNFLLGFDGDAINAILAGAGHNLRLLRRWLIRLLCAI FTWLSAARPSPDLRLPNYHIA >Mature_181_residues MECIGKGKARTRFEFGVKVSIATTNAAAPGGQFVLGMQSQPGNPYDGHTLAGQIEQVERITGVAVARAYVDRGYRGHGVE AEGRRIFISRQKRGITPTIRRELRRRTAIEPVIGHMKTDGHLGRNFLLGFDGDAINAILAGAGHNLRLLRRWLIRLLCAI FTWLSAARPSPDLRLPNYHIA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19979; Mature: 19979
Theoretical pI: Translated: 11.50; Mature: 11.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MECIGKGKARTRFEFGVKVSIATTNAAAPGGQFVLGMQSQPGNPYDGHTLAGQIEQVERI CCCCCCCCCCEEEEECEEEEEEECCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHH TGVAVARAYVDRGYRGHGVEAEGRRIFISRQKRGITPTIRRELRRRTAIEPVIGHMKTDG HHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC HLGRNFLLGFDGDAINAILAGAGHNLRLLRRWLIRLLCAIFTWLSAARPSPDLRLPNYHI CCCCEEEEEECCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC A C >Mature Secondary Structure MECIGKGKARTRFEFGVKVSIATTNAAAPGGQFVLGMQSQPGNPYDGHTLAGQIEQVERI CCCCCCCCCCEEEEECEEEEEEECCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHH TGVAVARAYVDRGYRGHGVEAEGRRIFISRQKRGITPTIRRELRRRTAIEPVIGHMKTDG HHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC HLGRNFLLGFDGDAINAILAGAGHNLRLLRRWLIRLLCAIFTWLSAARPSPDLRLPNYHI CCCCEEEEEECCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC A C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA