Definition Acidiphilium cryptum JF-5 plasmid pACRY01, complete sequence.
Accession NC_009467
Length 203,589

Click here to switch to the map view.

The map label for this gene is 148243654

Identifier: 148243654

GI number: 148243654

Start: 22631

End: 23713

Strand: Reverse

Name: 148243654

Synonym: Acry_3125

Alternate gene names: NA

Gene position: 23713-22631 (Counterclockwise)

Preceding gene: 148243655

Following gene: 148243652

Centisome position: 11.65

GC content: 66.76

Gene sequence:

>1083_bases
TTGACGGACGCTATCCATTTCCAGCACACGCTGCCGCTTGATCGATCCTCGATGACGCGCTGGCGCAAGCGGATCGGGTC
CGAGCGGATGGAGGCCCTGCTCGCCGAGACGCTGGCGGCCGCCGAGCGGGGTGGCGCCGTGGCGGAGAAGCACTACGAGC
GGGTCACCATCGATACCACGGTCCAGCCGAAGGCAGTGACGCATCCGACCGACAGCAAGCTGCTGCACCGCGGCATCGAG
GCACTCGCTCGCATGGCGCGCAAGCACGGTATCACGCTACGCCAGTCGTATCGCCGGGTTGCGCGCTACGCCAGGCAGGA
GGCGGCCCGCCTGCATCATGGTGGCAAACGCCGCGAGGCCGAGGCTCGCGTGCGCAAGCTGCGGACCTGGCTGGGCCGGC
TGGCGCGTGACATCACCCGCAAGATCGCAGGCAACGCTGAAGCGAAGGCCACGTTCGCCGAAACGCTGGGCCTGATCAAT
CGCCTGCTTCGCCAGAAGCGCTCCGATCGCGGTGCCGACAAGCTCTATTCCCTGCACGCGCCTGAGGTGGAGTGCATCGG
CAAGGGCAAGGCCAGGACGCGCTTCGAATTCGGCGTGAAGGTCTCCATCGCCACCACCAACGCCGCTGCACCCGGCGGTC
AGTTCGTTCTCGGCATGCAGAGCCAGCCGGGAAATCCCTATGACGGCCACACCCTGGCCGGCCAGATCGAGCAGGTCGAG
CGGATCACCGGCGTTGCCGTCGCCCGCGCCTATGTCGACCGCGGCTATCGCGGCTACGGCGTCGAAGCCGAGGGCAGAAA
GATCTTCATATCCCGCCAGAAACGCGGCATCACCCCCACCATCCGCCGCGAGTTGCGCCGACGCGCCGCCATCGAACCCG
TCATCGGCCACATGAAGACCGACAGCCATCTGGGGCGGAACTTCCTGCTCGGCGTCGACGGTGATGCCATCAACGCCATC
CTCGCCGGCGTCGGACACAACCTCCGGCTGCTCCGCAGATGGTTGATCAGGCTTCTTTGTGCCCTCCTCGCATGGCTCTC
TGCCGCAAACCGCTCACCAAGCCTCGGCTTCGCCCACCGCTAG

Upstream 100 bases:

>100_bases
TCGAACTCATGGCACCCGCCATCGATGCCGATACACCACGAATTTCCACCGTCGCCGCGTGACCATTGGCCGCTTCAGCT
ACACCAGAATTTCCACCACA

Downstream 100 bases:

>100_bases
ATCACATAGTTCACAGGCGACTTGGTACGAAGCCCAGCTTGCGCCGATCCGCGGACCAGATATGCACGCCGTCTGCCACA
CTCGTCCACACCCAGCCGCG

Product: transposase, IS4 family protein

Products: NA

Alternate protein names: ORFA [H]

Number of amino acids: Translated: 360; Mature: 359

Protein sequence:

>360_residues
MTDAIHFQHTLPLDRSSMTRWRKRIGSERMEALLAETLAAAERGGAVAEKHYERVTIDTTVQPKAVTHPTDSKLLHRGIE
ALARMARKHGITLRQSYRRVARYARQEAARLHHGGKRREAEARVRKLRTWLGRLARDITRKIAGNAEAKATFAETLGLIN
RLLRQKRSDRGADKLYSLHAPEVECIGKGKARTRFEFGVKVSIATTNAAAPGGQFVLGMQSQPGNPYDGHTLAGQIEQVE
RITGVAVARAYVDRGYRGYGVEAEGRKIFISRQKRGITPTIRRELRRRAAIEPVIGHMKTDSHLGRNFLLGVDGDAINAI
LAGVGHNLRLLRRWLIRLLCALLAWLSAANRSPSLGFAHR

Sequences:

>Translated_360_residues
MTDAIHFQHTLPLDRSSMTRWRKRIGSERMEALLAETLAAAERGGAVAEKHYERVTIDTTVQPKAVTHPTDSKLLHRGIE
ALARMARKHGITLRQSYRRVARYARQEAARLHHGGKRREAEARVRKLRTWLGRLARDITRKIAGNAEAKATFAETLGLIN
RLLRQKRSDRGADKLYSLHAPEVECIGKGKARTRFEFGVKVSIATTNAAAPGGQFVLGMQSQPGNPYDGHTLAGQIEQVE
RITGVAVARAYVDRGYRGYGVEAEGRKIFISRQKRGITPTIRRELRRRAAIEPVIGHMKTDSHLGRNFLLGVDGDAINAI
LAGVGHNLRLLRRWLIRLLCALLAWLSAANRSPSLGFAHR
>Mature_359_residues
TDAIHFQHTLPLDRSSMTRWRKRIGSERMEALLAETLAAAERGGAVAEKHYERVTIDTTVQPKAVTHPTDSKLLHRGIEA
LARMARKHGITLRQSYRRVARYARQEAARLHHGGKRREAEARVRKLRTWLGRLARDITRKIAGNAEAKATFAETLGLINR
LLRQKRSDRGADKLYSLHAPEVECIGKGKARTRFEFGVKVSIATTNAAAPGGQFVLGMQSQPGNPYDGHTLAGQIEQVER
ITGVAVARAYVDRGYRGYGVEAEGRKIFISRQKRGITPTIRRELRRRAAIEPVIGHMKTDSHLGRNFLLGVDGDAINAIL
AGVGHNLRLLRRWLIRLLCALLAWLSAANRSPSLGFAHR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008490 [H]

Pfam domain/function: PF05598 DUF772 [H]

EC number: NA

Molecular weight: Translated: 40208; Mature: 40077

Theoretical pI: Translated: 11.72; Mature: 11.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDAIHFQHTLPLDRSSMTRWRKRIGSERMEALLAETLAAAERGGAVAEKHYERVTIDTT
CCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCEEEEECC
VQPKAVTHPTDSKLLHRGIEALARMARKHGITLRQSYRRVARYARQEAARLHHGGKRREA
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
EARVRKLRTWLGRLARDITRKIAGNAEAKATFAETLGLINRLLRQKRSDRGADKLYSLHA
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCC
PEVECIGKGKARTRFEFGVKVSIATTNAAAPGGQFVLGMQSQPGNPYDGHTLAGQIEQVE
CCHHCCCCCCCCEEEEECEEEEEEECCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHH
RITGVAVARAYVDRGYRGYGVEAEGRKIFISRQKRGITPTIRRELRRRAAIEPVIGHMKT
HHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCC
DSHLGRNFLLGVDGDAINAILAGVGHNLRLLRRWLIRLLCALLAWLSAANRSPSLGFAHR
CHHCCCCEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
TDAIHFQHTLPLDRSSMTRWRKRIGSERMEALLAETLAAAERGGAVAEKHYERVTIDTT
CCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCEEEEECC
VQPKAVTHPTDSKLLHRGIEALARMARKHGITLRQSYRRVARYARQEAARLHHGGKRREA
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
EARVRKLRTWLGRLARDITRKIAGNAEAKATFAETLGLINRLLRQKRSDRGADKLYSLHA
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCC
PEVECIGKGKARTRFEFGVKVSIATTNAAAPGGQFVLGMQSQPGNPYDGHTLAGQIEQVE
CCHHCCCCCCCCEEEEECEEEEEEECCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHH
RITGVAVARAYVDRGYRGYGVEAEGRKIFISRQKRGITPTIRRELRRRAAIEPVIGHMKT
HHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCC
DSHLGRNFLLGVDGDAINAILAGVGHNLRLLRRWLIRLLCALLAWLSAANRSPSLGFAHR
CHHCCCCEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8429568 [H]