Definition Acidiphilium cryptum JF-5 plasmid pACRY01, complete sequence.
Accession NC_009467
Length 203,589

Click here to switch to the map view.

The map label for this gene is 148243648

Identifier: 148243648

GI number: 148243648

Start: 15617

End: 16633

Strand: Reverse

Name: 148243648

Synonym: Acry_3118

Alternate gene names: NA

Gene position: 16633-15617 (Counterclockwise)

Preceding gene: 148243651

Following gene: 148243647

Centisome position: 8.17

GC content: 62.44

Gene sequence:

>1017_bases
ATGACGATTGATGTTCTGGGGATTGATCTGGCGAAGAACGTGTTTCAGCTGCACGGGGTCGACCGGAAGGGGCATCCTGT
CTTCAGGCGCCGGGTCATGCGTGACCAGTTGTTGTCGGTGCTGGCCGGTATTGAGCCCTGCACGATCGCGATCGAGGCGT
GTACCGGTGCCTTCTGCTGGGCGAGGAAGTTTGAAGCGCTCGGGCACAAGGTGAAGATCGTCAGCCCGCAATACGTGAAG
CCGTTCGTCCGTCGGCAGAAGAACGACAACAATGATGCGGAGGCGATCTGCACGGCGGTTCGCCAACCGCATATTCCGCT
GGTGCCGAAGAAGACAGTCGAGCAGCAGGATGTCCAGGCCCTGCATCGGGCGCGCCAGCGCATGGTGAACCACCGCACTG
CTGTGGTCAGCCAGATCCGCGGACTCCTGCTTGATCGCGGCATCGCCTTCGGCAAGTCCATCACCCGCGCGCGGCGAATG
ATTCCGGAGATATTGGCCAATCCGGACAATGAACTGACGGCGATGGCCCGGGAGGCAATCGGCGAGCTCTGGGACCTGTT
TTGCGACCTCGACCGACGTATTGCCATTTTCGACGCGAAGATCGCAGCCGTGTTCAAGAGCAGCGCAGTTTGCCAGCGTA
TCGCCCGCATCAAGGGCGTCGGCCCCAAGACCGCCACCGCGATCGTCGCCGCCGTCGGTGATGGCGCTGAATTCAAGAAC
GGCCGTCATATGGCCGCTTGGCTCGGGTTGGTCCCGCGCCAGCATTCGAGCGGCGATCGGCAGATCATGATGGGCATCTC
CAAGCGTGGGAGCCAGCACTTGCGCAGCCTGCTCGTTCACGGCGCACGCGCGGTGGTTCGAACTGCCGGGACAAGGAATG
ATCCCATGAACCAATGGGTCACCCAGCTTCAGGAGCGGCGGGGCTTCAACCGGGCAACGGTTGCGGTCGCCAATAAGAAT
GCACGGATCATCTGGGCCGTGCTGCGAACGGGCGAACCGTACCGCCCGGCCGCCTGA

Upstream 100 bases:

>100_bases
ATCTTCAGGCCGCCATACTCCTTGCGCCACCTAATGGGATGGACGGCTCTCCCTCCCCACCGGCAGGCTGTGCCGTTGTT
GAACCTGGAGGAGAGCGACC

Downstream 100 bases:

>100_bases
AGGTTGGACTACAGTTTGCGGGTAGACGGAGAAATGGGCTGCACTGATCGAACCGGCGCGTGACGAACCTGACTATTATC
GAGGCTTCCGAAGCCTACCA

Product: transposase IS116/IS110/IS902 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 338; Mature: 337

Protein sequence:

>338_residues
MTIDVLGIDLAKNVFQLHGVDRKGHPVFRRRVMRDQLLSVLAGIEPCTIAIEACTGAFCWARKFEALGHKVKIVSPQYVK
PFVRRQKNDNNDAEAICTAVRQPHIPLVPKKTVEQQDVQALHRARQRMVNHRTAVVSQIRGLLLDRGIAFGKSITRARRM
IPEILANPDNELTAMAREAIGELWDLFCDLDRRIAIFDAKIAAVFKSSAVCQRIARIKGVGPKTATAIVAAVGDGAEFKN
GRHMAAWLGLVPRQHSSGDRQIMMGISKRGSQHLRSLLVHGARAVVRTAGTRNDPMNQWVTQLQERRGFNRATVAVANKN
ARIIWAVLRTGEPYRPAA

Sequences:

>Translated_338_residues
MTIDVLGIDLAKNVFQLHGVDRKGHPVFRRRVMRDQLLSVLAGIEPCTIAIEACTGAFCWARKFEALGHKVKIVSPQYVK
PFVRRQKNDNNDAEAICTAVRQPHIPLVPKKTVEQQDVQALHRARQRMVNHRTAVVSQIRGLLLDRGIAFGKSITRARRM
IPEILANPDNELTAMAREAIGELWDLFCDLDRRIAIFDAKIAAVFKSSAVCQRIARIKGVGPKTATAIVAAVGDGAEFKN
GRHMAAWLGLVPRQHSSGDRQIMMGISKRGSQHLRSLLVHGARAVVRTAGTRNDPMNQWVTQLQERRGFNRATVAVANKN
ARIIWAVLRTGEPYRPAA
>Mature_337_residues
TIDVLGIDLAKNVFQLHGVDRKGHPVFRRRVMRDQLLSVLAGIEPCTIAIEACTGAFCWARKFEALGHKVKIVSPQYVKP
FVRRQKNDNNDAEAICTAVRQPHIPLVPKKTVEQQDVQALHRARQRMVNHRTAVVSQIRGLLLDRGIAFGKSITRARRMI
PEILANPDNELTAMAREAIGELWDLFCDLDRRIAIFDAKIAAVFKSSAVCQRIARIKGVGPKTATAIVAAVGDGAEFKNG
RHMAAWLGLVPRQHSSGDRQIMMGISKRGSQHLRSLLVHGARAVVRTAGTRNDPMNQWVTQLQERRGFNRATVAVANKNA
RIIWAVLRTGEPYRPAA

Specific function: Required for the transposition of the insertion element (Potential) [H]

COG id: COG3547

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase IS1111A/IS1328/IS1533 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003346
- InterPro:   IPR002525 [H]

Pfam domain/function: PF02371 Transposase_20; PF01548 Transposase_9 [H]

EC number: NA

Molecular weight: Translated: 37613; Mature: 37482

Theoretical pI: Translated: 11.46; Mature: 11.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIDVLGIDLAKNVFQLHGVDRKGHPVFRRRVMRDQLLSVLAGIEPCTIAIEACTGAFCW
CEEEEEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHEEHHHHHHHHHH
ARKFEALGHKVKIVSPQYVKPFVRRQKNDNNDAEAICTAVRQPHIPLVPKKTVEQQDVQA
HHHHHHCCCEEEECCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
LHRARQRMVNHRTAVVSQIRGLLLDRGIAFGKSITRARRMIPEILANPDNELTAMAREAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
GELWDLFCDLDRRIAIFDAKIAAVFKSSAVCQRIARIKGVGPKTATAIVAAVGDGAEFKN
HHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHCC
GRHMAAWLGLVPRQHSSGDRQIMMGISKRGSQHLRSLLVHGARAVVRTAGTRNDPMNQWV
CCHHHHHHHCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
TQLQERRGFNRATVAVANKNARIIWAVLRTGEPYRPAA
HHHHHHCCCCCEEEEEECCCCEEEEEEEECCCCCCCCC
>Mature Secondary Structure 
TIDVLGIDLAKNVFQLHGVDRKGHPVFRRRVMRDQLLSVLAGIEPCTIAIEACTGAFCW
EEEEEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHEEHHHHHHHHHH
ARKFEALGHKVKIVSPQYVKPFVRRQKNDNNDAEAICTAVRQPHIPLVPKKTVEQQDVQA
HHHHHHCCCEEEECCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
LHRARQRMVNHRTAVVSQIRGLLLDRGIAFGKSITRARRMIPEILANPDNELTAMAREAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
GELWDLFCDLDRRIAIFDAKIAAVFKSSAVCQRIARIKGVGPKTATAIVAAVGDGAEFKN
HHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHCC
GRHMAAWLGLVPRQHSSGDRQIMMGISKRGSQHLRSLLVHGARAVVRTAGTRNDPMNQWV
CCHHHHHHHCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
TQLQERRGFNRATVAVANKNARIIWAVLRTGEPYRPAA
HHHHHHCCCCCEEEEEECCCCEEEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1324903; 12704232 [H]