Definition | Acidiphilium cryptum JF-5 plasmid pACRY01, complete sequence. |
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Accession | NC_009467 |
Length | 203,589 |
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The map label for this gene is 148243648
Identifier: 148243648
GI number: 148243648
Start: 15617
End: 16633
Strand: Reverse
Name: 148243648
Synonym: Acry_3118
Alternate gene names: NA
Gene position: 16633-15617 (Counterclockwise)
Preceding gene: 148243651
Following gene: 148243647
Centisome position: 8.17
GC content: 62.44
Gene sequence:
>1017_bases ATGACGATTGATGTTCTGGGGATTGATCTGGCGAAGAACGTGTTTCAGCTGCACGGGGTCGACCGGAAGGGGCATCCTGT CTTCAGGCGCCGGGTCATGCGTGACCAGTTGTTGTCGGTGCTGGCCGGTATTGAGCCCTGCACGATCGCGATCGAGGCGT GTACCGGTGCCTTCTGCTGGGCGAGGAAGTTTGAAGCGCTCGGGCACAAGGTGAAGATCGTCAGCCCGCAATACGTGAAG CCGTTCGTCCGTCGGCAGAAGAACGACAACAATGATGCGGAGGCGATCTGCACGGCGGTTCGCCAACCGCATATTCCGCT GGTGCCGAAGAAGACAGTCGAGCAGCAGGATGTCCAGGCCCTGCATCGGGCGCGCCAGCGCATGGTGAACCACCGCACTG CTGTGGTCAGCCAGATCCGCGGACTCCTGCTTGATCGCGGCATCGCCTTCGGCAAGTCCATCACCCGCGCGCGGCGAATG ATTCCGGAGATATTGGCCAATCCGGACAATGAACTGACGGCGATGGCCCGGGAGGCAATCGGCGAGCTCTGGGACCTGTT TTGCGACCTCGACCGACGTATTGCCATTTTCGACGCGAAGATCGCAGCCGTGTTCAAGAGCAGCGCAGTTTGCCAGCGTA TCGCCCGCATCAAGGGCGTCGGCCCCAAGACCGCCACCGCGATCGTCGCCGCCGTCGGTGATGGCGCTGAATTCAAGAAC GGCCGTCATATGGCCGCTTGGCTCGGGTTGGTCCCGCGCCAGCATTCGAGCGGCGATCGGCAGATCATGATGGGCATCTC CAAGCGTGGGAGCCAGCACTTGCGCAGCCTGCTCGTTCACGGCGCACGCGCGGTGGTTCGAACTGCCGGGACAAGGAATG ATCCCATGAACCAATGGGTCACCCAGCTTCAGGAGCGGCGGGGCTTCAACCGGGCAACGGTTGCGGTCGCCAATAAGAAT GCACGGATCATCTGGGCCGTGCTGCGAACGGGCGAACCGTACCGCCCGGCCGCCTGA
Upstream 100 bases:
>100_bases ATCTTCAGGCCGCCATACTCCTTGCGCCACCTAATGGGATGGACGGCTCTCCCTCCCCACCGGCAGGCTGTGCCGTTGTT GAACCTGGAGGAGAGCGACC
Downstream 100 bases:
>100_bases AGGTTGGACTACAGTTTGCGGGTAGACGGAGAAATGGGCTGCACTGATCGAACCGGCGCGTGACGAACCTGACTATTATC GAGGCTTCCGAAGCCTACCA
Product: transposase IS116/IS110/IS902 family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 338; Mature: 337
Protein sequence:
>338_residues MTIDVLGIDLAKNVFQLHGVDRKGHPVFRRRVMRDQLLSVLAGIEPCTIAIEACTGAFCWARKFEALGHKVKIVSPQYVK PFVRRQKNDNNDAEAICTAVRQPHIPLVPKKTVEQQDVQALHRARQRMVNHRTAVVSQIRGLLLDRGIAFGKSITRARRM IPEILANPDNELTAMAREAIGELWDLFCDLDRRIAIFDAKIAAVFKSSAVCQRIARIKGVGPKTATAIVAAVGDGAEFKN GRHMAAWLGLVPRQHSSGDRQIMMGISKRGSQHLRSLLVHGARAVVRTAGTRNDPMNQWVTQLQERRGFNRATVAVANKN ARIIWAVLRTGEPYRPAA
Sequences:
>Translated_338_residues MTIDVLGIDLAKNVFQLHGVDRKGHPVFRRRVMRDQLLSVLAGIEPCTIAIEACTGAFCWARKFEALGHKVKIVSPQYVK PFVRRQKNDNNDAEAICTAVRQPHIPLVPKKTVEQQDVQALHRARQRMVNHRTAVVSQIRGLLLDRGIAFGKSITRARRM IPEILANPDNELTAMAREAIGELWDLFCDLDRRIAIFDAKIAAVFKSSAVCQRIARIKGVGPKTATAIVAAVGDGAEFKN GRHMAAWLGLVPRQHSSGDRQIMMGISKRGSQHLRSLLVHGARAVVRTAGTRNDPMNQWVTQLQERRGFNRATVAVANKN ARIIWAVLRTGEPYRPAA >Mature_337_residues TIDVLGIDLAKNVFQLHGVDRKGHPVFRRRVMRDQLLSVLAGIEPCTIAIEACTGAFCWARKFEALGHKVKIVSPQYVKP FVRRQKNDNNDAEAICTAVRQPHIPLVPKKTVEQQDVQALHRARQRMVNHRTAVVSQIRGLLLDRGIAFGKSITRARRMI PEILANPDNELTAMAREAIGELWDLFCDLDRRIAIFDAKIAAVFKSSAVCQRIARIKGVGPKTATAIVAAVGDGAEFKNG RHMAAWLGLVPRQHSSGDRQIMMGISKRGSQHLRSLLVHGARAVVRTAGTRNDPMNQWVTQLQERRGFNRATVAVANKNA RIIWAVLRTGEPYRPAA
Specific function: Required for the transposition of the insertion element (Potential) [H]
COG id: COG3547
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase IS1111A/IS1328/IS1533 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003346 - InterPro: IPR002525 [H]
Pfam domain/function: PF02371 Transposase_20; PF01548 Transposase_9 [H]
EC number: NA
Molecular weight: Translated: 37613; Mature: 37482
Theoretical pI: Translated: 11.46; Mature: 11.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIDVLGIDLAKNVFQLHGVDRKGHPVFRRRVMRDQLLSVLAGIEPCTIAIEACTGAFCW CEEEEEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHEEHHHHHHHHHH ARKFEALGHKVKIVSPQYVKPFVRRQKNDNNDAEAICTAVRQPHIPLVPKKTVEQQDVQA HHHHHHCCCEEEECCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHH LHRARQRMVNHRTAVVSQIRGLLLDRGIAFGKSITRARRMIPEILANPDNELTAMAREAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH GELWDLFCDLDRRIAIFDAKIAAVFKSSAVCQRIARIKGVGPKTATAIVAAVGDGAEFKN HHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHCC GRHMAAWLGLVPRQHSSGDRQIMMGISKRGSQHLRSLLVHGARAVVRTAGTRNDPMNQWV CCHHHHHHHCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH TQLQERRGFNRATVAVANKNARIIWAVLRTGEPYRPAA HHHHHHCCCCCEEEEEECCCCEEEEEEEECCCCCCCCC >Mature Secondary Structure TIDVLGIDLAKNVFQLHGVDRKGHPVFRRRVMRDQLLSVLAGIEPCTIAIEACTGAFCW EEEEEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHEEHHHHHHHHHH ARKFEALGHKVKIVSPQYVKPFVRRQKNDNNDAEAICTAVRQPHIPLVPKKTVEQQDVQA HHHHHHCCCEEEECCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHH LHRARQRMVNHRTAVVSQIRGLLLDRGIAFGKSITRARRMIPEILANPDNELTAMAREAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH GELWDLFCDLDRRIAIFDAKIAAVFKSSAVCQRIARIKGVGPKTATAIVAAVGDGAEFKN HHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHCC GRHMAAWLGLVPRQHSSGDRQIMMGISKRGSQHLRSLLVHGARAVVRTAGTRNDPMNQWV CCHHHHHHHCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH TQLQERRGFNRATVAVANKNARIIWAVLRTGEPYRPAA HHHHHHCCCCCEEEEEECCCCEEEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1324903; 12704232 [H]