Definition | Acidiphilium cryptum JF-5 plasmid pACRY01, complete sequence. |
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Accession | NC_009467 |
Length | 203,589 |
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The map label for this gene is 148243647
Identifier: 148243647
GI number: 148243647
Start: 14156
End: 15196
Strand: Reverse
Name: 148243647
Synonym: Acry_3116
Alternate gene names: NA
Gene position: 15196-14156 (Counterclockwise)
Preceding gene: 148243648
Following gene: 148243644
Centisome position: 7.46
GC content: 61.67
Gene sequence:
>1041_bases ATGGATATCATGATTCTCGGCATCGATCTTGGGAAGAACTCTTGCAGCGTGGTGGGCATGGACGCCGCCGGCCGGGTTGT TTTGAGGCGGAGACTTCGGCGGGGAACGTTGGAAAGTTTCGTTGGCGAGCTTGGGTCGTGCATTGTGGCAATGGAAGCAT GTTGCGGCGCTCATCACCTCGGGCGGATTTTCGCCGCGCGGGGCCACGAGGTGCGGCTGATGTCGCCGGAATATGTCCGT CCGTACGTGAAGGCGCAGAAGAACGATGATCTCGACGCGGAGGCGATCGCAGAGGCTGCGACGCGGCCAACGATGCGTTT CGTGCCTGTGAAGAGCCAGGACCAATCTGATCTCCAGGCTTTGCACCGAGCCCGGGAGCGCCTCGTCTCGGAACGGACGG CGCTGATCAATCACTTGCGGGCGTTGCTGCTGGAGCGAGGGATCGTCGTTCCGCAAGGCCGGAGGAAACTGGAAGCCGAG CTTGAGACATTGGCCGAAGATGGCGGTTTTGCCGCGTTGAGCCCGCGCATCCGGACGTTGATCGAAGATCTTCGGGCGGA ATGGCGTTCACTCGACCAGAGGATCACCGGCTTCGACGCCGAGTTCGTTCAGTTGGCTCGTGACGACGTGGCTGTGCGAC GTTTGACCAAAATCCCAGGAATTGGAACGATAAACGCTACGGCGCTGGCTGCGGCGGTCGGCGAGGCGCATGCATTCAAA CGTGGGCGGGACATGGCGGCGTGGCTGGGGCTCGTTCCACGGCAAATGACAACGGGTGGAAAACCGCGCCTGCTCGGCAT CAGCAAACGCGGCAATCGTTATTTGCGGAAGAACTTGATCCATGGCGCACGAGCGGCGCTGCCTTATCTTGTCGAACGTG ATACGCCGTTGGGCCGCTGGGCGCGGGGATTGCTCGATCGAGCGCATAAGAACGTGGTCGTAGTCGCGCTGGCCGCGAAG CTGGCTCGGATCGCATGGGCCGTTTTGGCGCACGGTTGCGATTACGACGCCCAATTCGAAGCGGCGGCTGCGGCCGCATG A
Upstream 100 bases:
>100_bases ACTTGCCGATGATCTCTTCCGGCTTGTGATTATGGGATGGCCCGCCCCTCTCGTGGCGATCGGGTAGTATCGCCGCTGGT TTGGAGAGAGGAGCAGACCG
Downstream 100 bases:
>100_bases CGGAATCGCCCGAACAGCGCTCACAGTTGGGCGCGAAAGGGCAGTCGATGTCTGCGTGAGGTGAAAGGAAGATGGCCTGA CAGTCGAACGGCGGCTTGAA
Product: transposase IS116/IS110/IS902 family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 346; Mature: 346
Protein sequence:
>346_residues MDIMILGIDLGKNSCSVVGMDAAGRVVLRRRLRRGTLESFVGELGSCIVAMEACCGAHHLGRIFAARGHEVRLMSPEYVR PYVKAQKNDDLDAEAIAEAATRPTMRFVPVKSQDQSDLQALHRARERLVSERTALINHLRALLLERGIVVPQGRRKLEAE LETLAEDGGFAALSPRIRTLIEDLRAEWRSLDQRITGFDAEFVQLARDDVAVRRLTKIPGIGTINATALAAAVGEAHAFK RGRDMAAWLGLVPRQMTTGGKPRLLGISKRGNRYLRKNLIHGARAALPYLVERDTPLGRWARGLLDRAHKNVVVVALAAK LARIAWAVLAHGCDYDAQFEAAAAAA
Sequences:
>Translated_346_residues MDIMILGIDLGKNSCSVVGMDAAGRVVLRRRLRRGTLESFVGELGSCIVAMEACCGAHHLGRIFAARGHEVRLMSPEYVR PYVKAQKNDDLDAEAIAEAATRPTMRFVPVKSQDQSDLQALHRARERLVSERTALINHLRALLLERGIVVPQGRRKLEAE LETLAEDGGFAALSPRIRTLIEDLRAEWRSLDQRITGFDAEFVQLARDDVAVRRLTKIPGIGTINATALAAAVGEAHAFK RGRDMAAWLGLVPRQMTTGGKPRLLGISKRGNRYLRKNLIHGARAALPYLVERDTPLGRWARGLLDRAHKNVVVVALAAK LARIAWAVLAHGCDYDAQFEAAAAAA >Mature_346_residues MDIMILGIDLGKNSCSVVGMDAAGRVVLRRRLRRGTLESFVGELGSCIVAMEACCGAHHLGRIFAARGHEVRLMSPEYVR PYVKAQKNDDLDAEAIAEAATRPTMRFVPVKSQDQSDLQALHRARERLVSERTALINHLRALLLERGIVVPQGRRKLEAE LETLAEDGGFAALSPRIRTLIEDLRAEWRSLDQRITGFDAEFVQLARDDVAVRRLTKIPGIGTINATALAAAVGEAHAFK RGRDMAAWLGLVPRQMTTGGKPRLLGISKRGNRYLRKNLIHGARAALPYLVERDTPLGRWARGLLDRAHKNVVVVALAAK LARIAWAVLAHGCDYDAQFEAAAAAA
Specific function: Required for the transposition of the insertion element (Potential) [H]
COG id: COG3547
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase IS1111A/IS1328/IS1533 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003346 - InterPro: IPR002525 [H]
Pfam domain/function: PF02371 Transposase_20; PF01548 Transposase_9 [H]
EC number: NA
Molecular weight: Translated: 37966; Mature: 37966
Theoretical pI: Translated: 10.51; Mature: 10.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIMILGIDLGKNSCSVVGMDAAGRVVLRRRLRRGTLESFVGELGSCIVAMEACCGAHHL CCEEEEEEECCCCCCEEEECCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCHHHH GRIFAARGHEVRLMSPEYVRPYVKAQKNDDLDAEAIAEAATRPTMRFVPVKSQDQSDLQA HHHHHCCCCEEEECCHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEEEECCCCCHHHHHH LHRARERLVSERTALINHLRALLLERGIVVPQGRRKLEAELETLAEDGGFAALSPRIRTL HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEECCHHHHHH IEDLRAEWRSLDQRITGFDAEFVQLARDDVAVRRLTKIPGIGTINATALAAAVGEAHAFK HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH RGRDMAAWLGLVPRQMTTGGKPRLLGISKRGNRYLRKNLIHGARAALPYLVERDTPLGRW CCCHHHHHHHCCCHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHH ARGLLDRAHKNVVVVALAAKLARIAWAVLAHGCDYDAQFEAAAAAA HHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCC >Mature Secondary Structure MDIMILGIDLGKNSCSVVGMDAAGRVVLRRRLRRGTLESFVGELGSCIVAMEACCGAHHL CCEEEEEEECCCCCCEEEECCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCHHHH GRIFAARGHEVRLMSPEYVRPYVKAQKNDDLDAEAIAEAATRPTMRFVPVKSQDQSDLQA HHHHHCCCCEEEECCHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEEEECCCCCHHHHHH LHRARERLVSERTALINHLRALLLERGIVVPQGRRKLEAELETLAEDGGFAALSPRIRTL HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEECCHHHHHH IEDLRAEWRSLDQRITGFDAEFVQLARDDVAVRRLTKIPGIGTINATALAAAVGEAHAFK HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH RGRDMAAWLGLVPRQMTTGGKPRLLGISKRGNRYLRKNLIHGARAALPYLVERDTPLGRW CCCHHHHHHHCCCHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHH ARGLLDRAHKNVVVVALAAKLARIAWAVLAHGCDYDAQFEAAAAAA HHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7607411 [H]