Definition | Acidiphilium cryptum JF-5 plasmid pACRY01, complete sequence. |
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Accession | NC_009467 |
Length | 203,589 |
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The map label for this gene is 148243645
Identifier: 148243645
GI number: 148243645
Start: 12788
End: 13297
Strand: Direct
Name: 148243645
Synonym: Acry_3114
Alternate gene names: NA
Gene position: 12788-13297 (Clockwise)
Preceding gene: 148243642
Following gene: 148243646
Centisome position: 6.28
GC content: 65.1
Gene sequence:
>510_bases ATGACGGTAGCGATAACGCGTTTGGACTTGTCGGCTATGGCGCTGCGCGAGCGGGCGGCTCGTGCGACGGATGCGAAAGT TTCGAGGCGGCTGCTGGCGATTGCTCTTGTTCTCGAAGGCTGGTCTCGGCGCGATGCGGCCGAGGCTTGTGCCATGGACC GGCAGACGCTGCGCGACTGGGTGCACCGTTACAATGGATTGGGGCCTGAAGGACTGAGCGCCGCGCCGCGCCGCAACGGC CCGCCACCCCGATTGTCGGCTTCGCAGCAGGCACAGATCGCGGCATGGGTCAGGCAGGGTCCGGACCTGGAGCGTGACGG CGTGGTGCGGTGGCGCTGTGTCGACCTGCAGCGGCGGATCAAGTCCGAGTTTGCGGTCACCCTGCACGAGACGTCGATCA GCCGACTGTTGCGGCGGCTCAAGTTCACGCGGGTCCAGCCACGTCCGTATCATCCGAAGAGGGACGCTGCGGCACAGGAC ATTTTTAAAAAGACTTCGCCGGCCTGGTAG
Upstream 100 bases:
>100_bases ACCTGACAATGCTCTCGCACTCATTACTATCCCAAAGCATTGAACAGCCCTGCGGCTTGGGCGGGTATGATTCGCTGAGC TTCCCCGAAGGAGGTTTGCG
Downstream 100 bases:
>100_bases CGGCGGCGATCCCGGCCAGGGCGGCCCGTAAGCCGATCGAGGTGTAGTTCGCCGATGAGGCCCGTGTCGGTCAGAAGGGA ACCCTGAGCTATGTCTGGGC
Product: transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 169; Mature: 168
Protein sequence:
>169_residues MTVAITRLDLSAMALRERAARATDAKVSRRLLAIALVLEGWSRRDAAEACAMDRQTLRDWVHRYNGLGPEGLSAAPRRNG PPPRLSASQQAQIAAWVRQGPDLERDGVVRWRCVDLQRRIKSEFAVTLHETSISRLLRRLKFTRVQPRPYHPKRDAAAQD IFKKTSPAW
Sequences:
>Translated_169_residues MTVAITRLDLSAMALRERAARATDAKVSRRLLAIALVLEGWSRRDAAEACAMDRQTLRDWVHRYNGLGPEGLSAAPRRNG PPPRLSASQQAQIAAWVRQGPDLERDGVVRWRCVDLQRRIKSEFAVTLHETSISRLLRRLKFTRVQPRPYHPKRDAAAQD IFKKTSPAW >Mature_168_residues TVAITRLDLSAMALRERAARATDAKVSRRLLAIALVLEGWSRRDAAEACAMDRQTLRDWVHRYNGLGPEGLSAAPRRNGP PPRLSASQQAQIAAWVRQGPDLERDGVVRWRCVDLQRRIKSEFAVTLHETSISRLLRRLKFTRVQPRPYHPKRDAAAQDI FKKTSPAW
Specific function: Unknown
COG id: COG3415
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To A.xylinum IS1268 ORFA [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009057 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19216; Mature: 19085
Theoretical pI: Translated: 11.83; Mature: 11.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVAITRLDLSAMALRERAARATDAKVSRRLLAIALVLEGWSRRDAAEACAMDRQTLRDW CEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH VHRYNGLGPEGLSAAPRRNGPPPRLSASQQAQIAAWVRQGPDLERDGVVRWRCVDLQRRI HHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHH KSEFAVTLHETSISRLLRRLKFTRVQPRPYHPKRDAAAQDIFKKTSPAW HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCC >Mature Secondary Structure TVAITRLDLSAMALRERAARATDAKVSRRLLAIALVLEGWSRRDAAEACAMDRQTLRDW EEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH VHRYNGLGPEGLSAAPRRNGPPPRLSASQQAQIAAWVRQGPDLERDGVVRWRCVDLQRRI HHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHH KSEFAVTLHETSISRLLRRLKFTRVQPRPYHPKRDAAAQDIFKKTSPAW HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]