Definition | Acidiphilium cryptum JF-5 plasmid pACRY01, complete sequence. |
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Accession | NC_009467 |
Length | 203,589 |
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The map label for this gene is 148243642
Identifier: 148243642
GI number: 148243642
Start: 9868
End: 10911
Strand: Direct
Name: 148243642
Synonym: Acry_3111
Alternate gene names: NA
Gene position: 9868-10911 (Clockwise)
Preceding gene: 148243641
Following gene: 148243645
Centisome position: 4.85
GC content: 66.0
Gene sequence:
>1044_bases ATGGCGCACTACGCAGGACTGGACATTTCGGACAAAGACACCGCCATTCACGTTGTGGACGACAACGGGAAGCTGGTCTG GCGGGGCAAGAGGGCCAGCGAGCCGGAGGTGCTCGCCGCGGCCCTGCGCCGGCATGCGCCCGAACTCGTTCGGGTCGGGC TCGAGACCGGACAGTTGGCGCCGTGGCTCTACCATTCGCTCAAGGACCTCGGTTTTCCGGTGATCTGCCTCGATGCGCGC CATGCACGCGTGGCGACAGCGTTGCAGCGGAACAAGACTGACGCACACGACGCTGAAACTTTGGCGCAGTTGGTCCGGAC TGGCTGGTATCGGGAGGCTCGTGTGAAAGGCTGGGCCGCACACGCCATGCGCCGTCTGGTCGGTGCCCGTTCGCAACTCG TCGGCATTTCAATCGATTTGTCGAACCAGATCCGCAGCACGCTGAAGACGTTTGGGCTGAGGGCGACAGGCGGGGCCGGA CGCGTCTTCGAAGCGAAGGTGCGCATCGCGCTGGAGGGCCGGCCCGAGGTCGCCGGCGTGGTCGAGCCGTTGCTTGCGGC CTGGCGCGCCGTCCGCGATCAGATCGCCGTACTCGACCGCAAGCTGATGGCCGCGGTCAAGGCCGACCCGACATGTCGGC TGCTGATGACCTGTCCGGGTGTCGGCGTAGTGGTTGCCGCGAGCTTCAGCGCCACCGTCGAGGCCCCAGCGCATTTCCGG CACTCACGCTCGATCGGCGCCTATCTCGGACTTACGCCCCGACGCAACCAGTCCGGCGAAATCGACCACAGCGCCGGCGT GTCCAAGCGCGGGGACCGGTTGCTGCGGAGCTACCTGTTCGAGGCGGCGGCCTCGCTGCTGGTGCGGGTGCAAAGCTCAT CAGCATTGAAAACATGGGGGCTGGCACTCGTGCAACGACTTGGTTTCAAGCGGGCAGCCGTTGCCGTCGCCCGTAAGATC GGCGTTGTGCTGCACGCCATGTGGAAGTCCAACCAGCCGTTCGAGGCTTGGCACGGCGCAACACCCAAGGCCCGAGCCGC CTGA
Upstream 100 bases:
>100_bases TTGAAGGAACATGCGGTGATCGCGATCCGGCGGTTTGATCTGTCAAACTGGGGCGCGAAGCGAGCGGGTGGTCCGCTTGT TGGAGCCGAGGGAGGCAATC
Downstream 100 bases:
>100_bases CGGTTTCGCCAGTTTACTGAATCCGCCCCTCAGGCGGACGCAGGCGTCCTCGCCGGACGCGACGAGGCTACCCCGAGTTG GGTCTTGCTGCCGGACTATC
Product: transposase IS116/IS110/IS902 family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 347; Mature: 346
Protein sequence:
>347_residues MAHYAGLDISDKDTAIHVVDDNGKLVWRGKRASEPEVLAAALRRHAPELVRVGLETGQLAPWLYHSLKDLGFPVICLDAR HARVATALQRNKTDAHDAETLAQLVRTGWYREARVKGWAAHAMRRLVGARSQLVGISIDLSNQIRSTLKTFGLRATGGAG RVFEAKVRIALEGRPEVAGVVEPLLAAWRAVRDQIAVLDRKLMAAVKADPTCRLLMTCPGVGVVVAASFSATVEAPAHFR HSRSIGAYLGLTPRRNQSGEIDHSAGVSKRGDRLLRSYLFEAAASLLVRVQSSSALKTWGLALVQRLGFKRAAVAVARKI GVVLHAMWKSNQPFEAWHGATPKARAA
Sequences:
>Translated_347_residues MAHYAGLDISDKDTAIHVVDDNGKLVWRGKRASEPEVLAAALRRHAPELVRVGLETGQLAPWLYHSLKDLGFPVICLDAR HARVATALQRNKTDAHDAETLAQLVRTGWYREARVKGWAAHAMRRLVGARSQLVGISIDLSNQIRSTLKTFGLRATGGAG RVFEAKVRIALEGRPEVAGVVEPLLAAWRAVRDQIAVLDRKLMAAVKADPTCRLLMTCPGVGVVVAASFSATVEAPAHFR HSRSIGAYLGLTPRRNQSGEIDHSAGVSKRGDRLLRSYLFEAAASLLVRVQSSSALKTWGLALVQRLGFKRAAVAVARKI GVVLHAMWKSNQPFEAWHGATPKARAA >Mature_346_residues AHYAGLDISDKDTAIHVVDDNGKLVWRGKRASEPEVLAAALRRHAPELVRVGLETGQLAPWLYHSLKDLGFPVICLDARH ARVATALQRNKTDAHDAETLAQLVRTGWYREARVKGWAAHAMRRLVGARSQLVGISIDLSNQIRSTLKTFGLRATGGAGR VFEAKVRIALEGRPEVAGVVEPLLAAWRAVRDQIAVLDRKLMAAVKADPTCRLLMTCPGVGVVVAASFSATVEAPAHFRH SRSIGAYLGLTPRRNQSGEIDHSAGVSKRGDRLLRSYLFEAAASLLVRVQSSSALKTWGLALVQRLGFKRAAVAVARKIG VVLHAMWKSNQPFEAWHGATPKARAA
Specific function: Required for the transposition of the insertion element (Potential) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase IS1111A/IS1328/IS1533 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003346 - InterPro: IPR002525 [H]
Pfam domain/function: PF02371 Transposase_20; PF01548 Transposase_9 [H]
EC number: NA
Molecular weight: Translated: 37705; Mature: 37574
Theoretical pI: Translated: 11.22; Mature: 11.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHYAGLDISDKDTAIHVVDDNGKLVWRGKRASEPEVLAAALRRHAPELVRVGLETGQLA CCCCCCCCCCCCCCEEEEEECCCEEEEECCCCCCHHHHHHHHHHCCHHHHHHCCCCCCCC PWLYHSLKDLGFPVICLDARHARVATALQRNKTDAHDAETLAQLVRTGWYREARVKGWAA HHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHH HAMRRLVGARSQLVGISIDLSNQIRSTLKTFGLRATGGAGRVFEAKVRIALEGRPEVAGV HHHHHHHCCHHHEEEEEEECHHHHHHHHHHHCCEECCCCCCEEEEEEEEEECCCCCHHHH VEPLLAAWRAVRDQIAVLDRKLMAAVKADPTCRLLMTCPGVGVVVAASFSATVEAPAHFR HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEECCCCCCCCCHHHH HSRSIGAYLGLTPRRNQSGEIDHSAGVSKRGDRLLRSYLFEAAASLLVRVQSSSALKTWG HCCCCCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH LALVQRLGFKRAAVAVARKIGVVLHAMWKSNQPFEAWHGATPKARAA HHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCC >Mature Secondary Structure AHYAGLDISDKDTAIHVVDDNGKLVWRGKRASEPEVLAAALRRHAPELVRVGLETGQLA CCCCCCCCCCCCCEEEEEECCCEEEEECCCCCCHHHHHHHHHHCCHHHHHHCCCCCCCC PWLYHSLKDLGFPVICLDARHARVATALQRNKTDAHDAETLAQLVRTGWYREARVKGWAA HHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHH HAMRRLVGARSQLVGISIDLSNQIRSTLKTFGLRATGGAGRVFEAKVRIALEGRPEVAGV HHHHHHHCCHHHEEEEEEECHHHHHHHHHHHCCEECCCCCCEEEEEEEEEECCCCCHHHH VEPLLAAWRAVRDQIAVLDRKLMAAVKADPTCRLLMTCPGVGVVVAASFSATVEAPAHFR HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEECCCCCCCCCHHHH HSRSIGAYLGLTPRRNQSGEIDHSAGVSKRGDRLLRSYLFEAAASLLVRVQSSSALKTWG HCCCCCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH LALVQRLGFKRAAVAVARKIGVVLHAMWKSNQPFEAWHGATPKARAA HHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1324903; 12704232 [H]