| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
Click here to switch to the map view.
The map label for this gene is 147675364
Identifier: 147675364
GI number: 147675364
Start: 210698
End: 211492
Strand: Direct
Name: 147675364
Synonym: VC0395_A0205
Alternate gene names: NA
Gene position: 210698-211492 (Clockwise)
Preceding gene: 147673679
Following gene: 147674969
Centisome position: 6.97
GC content: 47.3
Gene sequence:
>795_bases GTGAATATTGAACTCTTAGCTATACTGCTGCTGTTAGGGGCAGTGGTGGGTGTGCTTGCTGGCTTATTGGGCATTGGTGG CGGCTTACTAGTGGTCCCCGCTCTACTGTTTTTACTGCCTTATGCTGGCATCTCGACCGAGATTGTGATGCAGCTTGCGC TGGCCACATCGTTAGCGACGATCATACTCACATCAGGCTCATCGGCACTAAACCATCTAAAGCTGGGTAATGTCGATGTT TTTGTCGTGAAATGGTTAATGCCGGGTGTGGTGGTCGGTGGGTTTTTAGGCTCAGTGGTTGCCGAATGGATCCCAAGCCA ATATTTACCCAAAGTGTTCGGGGTCATTGTGCTCTGTTTGAGTGTGCAGATGTACCGTTCGATACGTGCATTGCAAAATC ATCCAATGCCAAGTGCATGGATTACCACCTTGTGCGGTACCGGCATTGGGGTAATCTCAAGTTTGGCCGGTATTGGCGGC GGTTCTTTATCGGTGCCATTTTTGAATCGACATGGCATTGAAATGAAAAAGGCGATAGGTTCTTCATCGGTCTGTGGTTT TGCGATTGCGATATCGGGCATGATTGGTTTTATTTTGCACGGTTATCAAGTGGAGAACTTGCCACAATACAGCCTTGGTT ATGTTTATTTACCTGCATTGTTAGCGATTGCTACAACATCGATGCTTACCACGCGAATTGGCGCTAAACTTGCCACCCAA ATGCCAACAGCAAGGCTTAAGCGATTCTTTGCCATTTTTTTAATGTGCGTCGCTGTGACCATGTTGTTCCAGTAA
Upstream 100 bases:
>100_bases CCAACCTTATGGACGAGAAATCTACAATATGATGCTCGCCTATATCGAAAAACACGGTTTTGCAGGTTTTGTCCGTGCAG GCAAAAAATAGGAACCAAAT
Downstream 100 bases:
>100_bases TACTCATTGTTTATAGAGAAGGTTTGTTATGCCTCAGGGTTATCTGCAGTTTCCCAATATTGACCCCGTATTGTTTTCGA TCGGCCCTCTAGCGGTGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 264; Mature: 264
Protein sequence:
>264_residues MNIELLAILLLLGAVVGVLAGLLGIGGGLLVVPALLFLLPYAGISTEIVMQLALATSLATIILTSGSSALNHLKLGNVDV FVVKWLMPGVVVGGFLGSVVAEWIPSQYLPKVFGVIVLCLSVQMYRSIRALQNHPMPSAWITTLCGTGIGVISSLAGIGG GSLSVPFLNRHGIEMKKAIGSSSVCGFAIAISGMIGFILHGYQVENLPQYSLGYVYLPALLAIATTSMLTTRIGAKLATQ MPTARLKRFFAIFLMCVAVTMLFQ
Sequences:
>Translated_264_residues MNIELLAILLLLGAVVGVLAGLLGIGGGLLVVPALLFLLPYAGISTEIVMQLALATSLATIILTSGSSALNHLKLGNVDV FVVKWLMPGVVVGGFLGSVVAEWIPSQYLPKVFGVIVLCLSVQMYRSIRALQNHPMPSAWITTLCGTGIGVISSLAGIGG GSLSVPFLNRHGIEMKKAIGSSSVCGFAIAISGMIGFILHGYQVENLPQYSLGYVYLPALLAIATTSMLTTRIGAKLATQ MPTARLKRFFAIFLMCVAVTMLFQ >Mature_264_residues MNIELLAILLLLGAVVGVLAGLLGIGGGLLVVPALLFLLPYAGISTEIVMQLALATSLATIILTSGSSALNHLKLGNVDV FVVKWLMPGVVVGGFLGSVVAEWIPSQYLPKVFGVIVLCLSVQMYRSIRALQNHPMPSAWITTLCGTGIGVISSLAGIGG GSLSVPFLNRHGIEMKKAIGSSSVCGFAIAISGMIGFILHGYQVENLPQYSLGYVYLPALLAIATTSMLTTRIGAKLATQ MPTARLKRFFAIFLMCVAVTMLFQ
Specific function: Unknown
COG id: COG0730
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0721 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002781 [H]
Pfam domain/function: PF01925 DUF81 [H]
EC number: NA
Molecular weight: Translated: 27736; Mature: 27736
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIELLAILLLLGAVVGVLAGLLGIGGGLLVVPALLFLLPYAGISTEIVMQLALATSLAT CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH IILTSGSSALNHLKLGNVDVFVVKWLMPGVVVGGFLGSVVAEWIPSQYLPKVFGVIVLCL HHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH SVQMYRSIRALQNHPMPSAWITTLCGTGIGVISSLAGIGGGSLSVPFLNRHGIEMKKAIG HHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCC SSSVCGFAIAISGMIGFILHGYQVENLPQYSLGYVYLPALLAIATTSMLTTRIGAKLATQ CCCHHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MPTARLKRFFAIFLMCVAVTMLFQ CCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNIELLAILLLLGAVVGVLAGLLGIGGGLLVVPALLFLLPYAGISTEIVMQLALATSLAT CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH IILTSGSSALNHLKLGNVDVFVVKWLMPGVVVGGFLGSVVAEWIPSQYLPKVFGVIVLCL HHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH SVQMYRSIRALQNHPMPSAWITTLCGTGIGVISSLAGIGGGSLSVPFLNRHGIEMKKAIG HHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCC SSSVCGFAIAISGMIGFILHGYQVENLPQYSLGYVYLPALLAIATTSMLTTRIGAKLATQ CCCHHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MPTARLKRFFAIFLMCVAVTMLFQ CCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]