| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is glmM
Identifier: 147674754
GI number: 147674754
Start: 171775
End: 173115
Strand: Direct
Name: glmM
Synonym: VC0395_A0168
Alternate gene names: 147674754
Gene position: 171775-173115 (Clockwise)
Preceding gene: 147674024
Following gene: 147675589
Centisome position: 5.68
GC content: 47.87
Gene sequence:
>1341_bases ATGTCTGATAAGAGACGTTATTTTGGCACTGATGGGGTTCGTGGCAAAGTTGGCCAGTACCCAATTACTCCTGATTTTGT ACTTAAGCTTGGCTGGGCGGCTGGACGTGTACTGGCAAAACAAGGCACGAGAAAAGTCATTATTGGTAAAGATACCCGTA TTTCTGGCTATATGTTGGAGTCTGCACTGGAAGCTGGGCTTGCAGCGGCAGGATTAAAAGCGACCTTCACCGGACCAATG CCAACGCCAGCTGTGGCCTATCTTACCCAAACGTTTCGTGCAGAAGCGGGGATTGTTATTTCTGCATCGCACAACCCTTA CTACGATAACGGCATTAAGTTCTTCTCTTATGAAGGAGCCAAACTGCCGGATGACATTGAGTTAGCGATTGAAGCTGAGT TAGATAAAGACATTGAATGTGTTGAATCGGCTGAGCTTGGTAAAGCTTCACGCATGGTGGATGCGGCGGGGCGTTACATC GAATTTTGTAAAAGCACTTTCCCTTCAAAACTCAGTCTATCTGGTTTGAAGCTTGTTGTGGATTGTGCCAATGGTGCCAC ATACCACATTGCGCCCAATGTTTTCCGTGAGTTGGGAGCGGAAGTCATTGCGATGGGCGTTGAGCCTAATGGTTTGAATA TCAATGACCAAGTCGGTGCAACCGACGTTCGCGCACTGCAAAAACGCGTTGTTGAAGAGCATGCTCATCTTGGCCTTGCT TTCGATGGTGACGGCGACCGCATCATCATGGTTGATCACCTAGGTAATAAAGTCGATGGTGACCAAATCGCTTACATTAT TGCCCGTGATGCACTGCGCCGTGGCGAGCTCAAAGGTGGCGTTGTTGGGACATTGATGACGAACCTTGGCATGGAGAATG GACTTAAACAGTTGGGCATTCCATTTGTACGCGCTGCGGTCGGTGATCGCTATGTTATGGAAAAACTTCTAGAGAAAGGC TGGAAGATTGGTGCGGAAAATTCAGGTCACGTCATCTTACTCGATAAAGTGACTACGGGGGATGCGATTGTCGCTGGCCT ACAAGTGCTGGCTTCAGTAGTGGGTAGTGAAATGACCCTGCATGAATTAGCGAAAGGTATGACGCTTTACCCACAAGTGT TGGAGAATGTCCGTTTTGCAGGAGATAACAATCCACTTGAAGCGGATGCGGTGAAAGCGGCGGTATCTGAGGTTGAAGCT GAGCTAGGTTCGAAAGGCCGTGTATTACTGCGCAAATCGGGTACAGAACCTCTGATCCGTGTGATGGTGGAAGGGGAAGA TGAAACCTTAGTGAAGCAATCTGCATTAAAAATTGCTCAAGCTGTAAAAGATAACTGCTAA
Upstream 100 bases:
>100_bases ATTATCCGTGTTCATGATGTAGAGCAGACCATTGATGCACTCAAAATGGTGCAGATGATGCATAACAATTTGTAAAAACA ATAATGTAAAGGAAACACAA
Downstream 100 bases:
>100_bases TTTGGGCGCTGGTTTCTACAATTCCTAGCTGATTGATTTCGCGCTAGGAATTGTAGAAATGCTCGAAAAAACGCTGTTGT GCGAGTTTTTTGAGCGATCA
Product: phosphoglucosamine mutase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 446; Mature: 445
Protein sequence:
>446_residues MSDKRRYFGTDGVRGKVGQYPITPDFVLKLGWAAGRVLAKQGTRKVIIGKDTRISGYMLESALEAGLAAAGLKATFTGPM PTPAVAYLTQTFRAEAGIVISASHNPYYDNGIKFFSYEGAKLPDDIELAIEAELDKDIECVESAELGKASRMVDAAGRYI EFCKSTFPSKLSLSGLKLVVDCANGATYHIAPNVFRELGAEVIAMGVEPNGLNINDQVGATDVRALQKRVVEEHAHLGLA FDGDGDRIIMVDHLGNKVDGDQIAYIIARDALRRGELKGGVVGTLMTNLGMENGLKQLGIPFVRAAVGDRYVMEKLLEKG WKIGAENSGHVILLDKVTTGDAIVAGLQVLASVVGSEMTLHELAKGMTLYPQVLENVRFAGDNNPLEADAVKAAVSEVEA ELGSKGRVLLRKSGTEPLIRVMVEGEDETLVKQSALKIAQAVKDNC
Sequences:
>Translated_446_residues MSDKRRYFGTDGVRGKVGQYPITPDFVLKLGWAAGRVLAKQGTRKVIIGKDTRISGYMLESALEAGLAAAGLKATFTGPM PTPAVAYLTQTFRAEAGIVISASHNPYYDNGIKFFSYEGAKLPDDIELAIEAELDKDIECVESAELGKASRMVDAAGRYI EFCKSTFPSKLSLSGLKLVVDCANGATYHIAPNVFRELGAEVIAMGVEPNGLNINDQVGATDVRALQKRVVEEHAHLGLA FDGDGDRIIMVDHLGNKVDGDQIAYIIARDALRRGELKGGVVGTLMTNLGMENGLKQLGIPFVRAAVGDRYVMEKLLEKG WKIGAENSGHVILLDKVTTGDAIVAGLQVLASVVGSEMTLHELAKGMTLYPQVLENVRFAGDNNPLEADAVKAAVSEVEA ELGSKGRVLLRKSGTEPLIRVMVEGEDETLVKQSALKIAQAVKDNC >Mature_445_residues SDKRRYFGTDGVRGKVGQYPITPDFVLKLGWAAGRVLAKQGTRKVIIGKDTRISGYMLESALEAGLAAAGLKATFTGPMP TPAVAYLTQTFRAEAGIVISASHNPYYDNGIKFFSYEGAKLPDDIELAIEAELDKDIECVESAELGKASRMVDAAGRYIE FCKSTFPSKLSLSGLKLVVDCANGATYHIAPNVFRELGAEVIAMGVEPNGLNINDQVGATDVRALQKRVVEEHAHLGLAF DGDGDRIIMVDHLGNKVDGDQIAYIIARDALRRGELKGGVVGTLMTNLGMENGLKQLGIPFVRAAVGDRYVMEKLLEKGW KIGAENSGHVILLDKVTTGDAIVAGLQVLASVVGSEMTLHELAKGMTLYPQVLENVRFAGDNNPLEADAVKAAVSEVEAE LGSKGRVLLRKSGTEPLIRVMVEGEDETLVKQSALKIAQAVKDNC
Specific function: Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
COG id: COG1109
COG function: function code G; Phosphomannomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family
Homologues:
Organism=Escherichia coli, GI1789566, Length=441, Percent_Identity=76.4172335600907, Blast_Score=676, Evalue=0.0, Organism=Escherichia coli, GI1788361, Length=449, Percent_Identity=25.3897550111359, Blast_Score=92, Evalue=5e-20, Organism=Saccharomyces cerevisiae, GI6323752, Length=393, Percent_Identity=24.9363867684478, Blast_Score=67, Evalue=8e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): GLMM_VIBC3 (A5F930)
Other databases:
- EMBL: CP000627 - EMBL: CP001235 - ProteinModelPortal: A5F930 - SMR: A5F930 - STRING: A5F930 - GenomeReviews: CP000627_GR - GenomeReviews: CP001235_GR - KEGG: vco:VC0395_A0168 - eggNOG: COG1109 - HOGENOM: HBG644964 - OMA: VHDRYIE - ProtClustDB: PRK10887 - BioCyc: VCHO345073:VC0395_A0168-MONOMER - HAMAP: MF_01554_B - InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005841 - InterPro: IPR006352 - Gene3D: G3DSA:3.40.120.10 - PRINTS: PR00509 - TIGRFAMs: TIGR01455
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV; SSF53738 A-D-PHexomutase_a/b/a-I/II/III
EC number: =5.4.2.10
Molecular weight: Translated: 47819; Mature: 47687
Theoretical pI: Translated: 5.55; Mature: 5.55
Prosite motif: PS00710 PGM_PMM
Important sites: ACT_SITE 103-103
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDKRRYFGTDGVRGKVGQYPITPDFVLKLGWAAGRVLAKQGTRKVIIGKDTRISGYMLE CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHH SALEAGLAAAGLKATFTGPMPTPAVAYLTQTFRAEAGIVISASHNPYYDNGIKFFSYEGA HHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEEECCC KLPDDIELAIEAELDKDIECVESAELGKASRMVDAAGRYIEFCKSTFPSKLSLSGLKLVV CCCCCEEEEEEECCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEE DCANGATYHIAPNVFRELGAEVIAMGVEPNGLNINDQVGATDVRALQKRVVEEHAHLGLA ECCCCCEEEECHHHHHHCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEE FDGDGDRIIMVDHLGNKVDGDQIAYIIARDALRRGELKGGVVGTLMTNLGMENGLKQLGI EECCCCEEEEEECCCCCCCCCCEEHHEEHHHHHHCCCCCCHHHHHHHHCCHHCCHHHHCC PFVRAAVGDRYVMEKLLEKGWKIGAENSGHVILLDKVTTGDAIVAGLQVLASVVGSEMTL HHHHHHHCCHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCHHH HELAKGMTLYPQVLENVRFAGDNNPLEADAVKAAVSEVEAELGSKGRVLLRKSGTEPLIR HHHHCCCCHHHHHHHCCEECCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEE VMVEGEDETLVKQSALKIAQAVKDNC EEECCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SDKRRYFGTDGVRGKVGQYPITPDFVLKLGWAAGRVLAKQGTRKVIIGKDTRISGYMLE CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHH SALEAGLAAAGLKATFTGPMPTPAVAYLTQTFRAEAGIVISASHNPYYDNGIKFFSYEGA HHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEEECCC KLPDDIELAIEAELDKDIECVESAELGKASRMVDAAGRYIEFCKSTFPSKLSLSGLKLVV CCCCCEEEEEEECCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEE DCANGATYHIAPNVFRELGAEVIAMGVEPNGLNINDQVGATDVRALQKRVVEEHAHLGLA ECCCCCEEEECHHHHHHCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEE FDGDGDRIIMVDHLGNKVDGDQIAYIIARDALRRGELKGGVVGTLMTNLGMENGLKQLGI EECCCCEEEEEECCCCCCCCCCEEHHEEHHHHHHCCCCCCHHHHHHHHCCHHCCHHHHCC PFVRAAVGDRYVMEKLLEKGWKIGAENSGHVILLDKVTTGDAIVAGLQVLASVVGSEMTL HHHHHHHCCHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCHHH HELAKGMTLYPQVLENVRFAGDNNPLEADAVKAAVSEVEAELGSKGRVLLRKSGTEPLIR HHHHCCCCHHHHHHHCCEECCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEE VMVEGEDETLVKQSALKIAQAVKDNC EEECCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA