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The map label for this gene is iscA [H]

Identifier: 147674050

GI number: 147674050

Start: 293608

End: 293931

Strand: Direct

Name: iscA [H]

Synonym: VC0395_A0279

Alternate gene names: 147674050

Gene position: 293608-293931 (Clockwise)

Preceding gene: 147674136

Following gene: 147673271

Centisome position: 9.71

GC content: 43.21

Gene sequence:

>324_bases
ATGGCCGTCACTCTTAGCGAAACCGCAGCAAGCCGAGTAAAAACTTTTCTGGATAATCGTGGAAAAGGCATCGGTTTACG
TCTTGGTGTCAAGACAACTGGGTGTTCGGGAATGGCGTATGTGCTCGAGTTTGTTGATGATCTCAACGAAGAAGACCACG
TATTTGAAAGCCATGGTGTGAAGGTGATCATTGACACCAAAAGCATGGTCTATTTAGATGGCACTCAACTCGATTACAAA
AAAGAAGGGTTAAACGAAGGCTTTGAATTCAACAACCCAAATGTCAAAAGCGAATGTGGTTGTGGTGAAAGCTTCAACGT
TTAA

Upstream 100 bases:

>100_bases
AGCCGCTGTTGCGGACTACAAGAAAAAGCATCAACACTAATTCGTTTGGGAGCGTCGAGCGCTCCCACCCTTTAATTTAT
TGAAATCATAAGGTTGAAGT

Downstream 100 bases:

>100_bases
CGGTAACTGACCATCGAGACTGTTCTCGATCACAGGACCGCTATCAAGATGAATTATTTTGAATTATTTGGGCTGCCGAT
CCAGTTTGAACTGGATGGTA

Product: HesB/YadR/YfhF family protein

Products: NA

Alternate protein names: Iron-sulfur cluster assembly protein [H]

Number of amino acids: Translated: 107; Mature: 106

Protein sequence:

>107_residues
MAVTLSETAASRVKTFLDNRGKGIGLRLGVKTTGCSGMAYVLEFVDDLNEEDHVFESHGVKVIIDTKSMVYLDGTQLDYK
KEGLNEGFEFNNPNVKSECGCGESFNV

Sequences:

>Translated_107_residues
MAVTLSETAASRVKTFLDNRGKGIGLRLGVKTTGCSGMAYVLEFVDDLNEEDHVFESHGVKVIIDTKSMVYLDGTQLDYK
KEGLNEGFEFNNPNVKSECGCGESFNV
>Mature_106_residues
AVTLSETAASRVKTFLDNRGKGIGLRLGVKTTGCSGMAYVLEFVDDLNEEDHVFESHGVKVIIDTKSMVYLDGTQLDYKK
EGLNEGFEFNNPNVKSECGCGESFNV

Specific function: Is able to transfer iron-sulfur clusters to apo- ferredoxin. Multiple cycles of [2Fe2S] cluster formation and transfer are observed, suggesting that iscA acts catalytically. Recruits intracellular free iron so as to provide iron for the assembly of transi

COG id: COG0316

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hesB/iscA family [H]

Homologues:

Organism=Homo sapiens, GI52426768, Length=106, Percent_Identity=40.5660377358491, Blast_Score=100, Evalue=2e-22,
Organism=Homo sapiens, GI160420328, Length=83, Percent_Identity=37.3493975903614, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1788877, Length=107, Percent_Identity=72.8971962616822, Blast_Score=167, Evalue=2e-43,
Organism=Escherichia coli, GI1787974, Length=105, Percent_Identity=42.8571428571429, Blast_Score=107, Evalue=2e-25,
Organism=Escherichia coli, GI1786351, Length=110, Percent_Identity=40, Blast_Score=77, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI193209025, Length=106, Percent_Identity=39.622641509434, Blast_Score=96, Evalue=4e-21,
Organism=Caenorhabditis elegans, GI25146411, Length=106, Percent_Identity=39.622641509434, Blast_Score=96, Evalue=4e-21,
Organism=Caenorhabditis elegans, GI71998452, Length=106, Percent_Identity=33.0188679245283, Blast_Score=62, Evalue=7e-11,
Organism=Saccharomyces cerevisiae, GI6323001, Length=105, Percent_Identity=36.1904761904762, Blast_Score=83, Evalue=9e-18,
Organism=Drosophila melanogaster, GI24642263, Length=106, Percent_Identity=41.5094339622642, Blast_Score=99, Evalue=5e-22,
Organism=Drosophila melanogaster, GI24649697, Length=108, Percent_Identity=35.1851851851852, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000361
- InterPro:   IPR016092
- InterPro:   IPR017870
- InterPro:   IPR011302 [H]

Pfam domain/function: PF01521 Fe-S_biosyn [H]

EC number: NA

Molecular weight: Translated: 11717; Mature: 11586

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: PS01152 HESB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVTLSETAASRVKTFLDNRGKGIGLRLGVKTTGCSGMAYVLEFVDDLNEEDHVFESHGV
CEEECCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCEECCCCC
KVIIDTKSMVYLDGTQLDYKKEGLNEGFEFNNPNVKSECGCGESFNV
EEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AVTLSETAASRVKTFLDNRGKGIGLRLGVKTTGCSGMAYVLEFVDDLNEEDHVFESHGV
EEECCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCEECCCCC
KVIIDTKSMVYLDGTQLDYKKEGLNEGFEFNNPNVKSECGCGESFNV
EEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA