Click here to switch to the map view.

The map label for this gene is yaaH [H]

Identifier: 147673823

GI number: 147673823

Start: 316005

End: 316598

Strand: Direct

Name: yaaH [H]

Synonym: VC0395_A0299

Alternate gene names: 147673823

Gene position: 316005-316598 (Clockwise)

Preceding gene: 147674479

Following gene: 147674293

Centisome position: 10.45

GC content: 49.16

Gene sequence:

>594_bases
ATGTCAACTAAGCTAGCCAACCCAGCACCACTCGGTCTGATGGGTTTCGGTATGACCACCATTCTGCTTAATATCCATAA
CGCAGGTTTTTTCCCAATCGACTCAATGATTCTGGCGATGGGTATTTTTTACGGCGGTCTGAGTCAAGTTATCGTCGGCA
TCATGTGCTTTAAACGTGGTGACACCTTCGGTACAACGGCATTTACTTCTTACGGTCTGTTCTGGCTGACGCTGGTTGGT
TTGATCGTAATGCCACACATGGGACTGCCTGCAAGCCCTGCGCCTTTCATGGGGTGGTACTTGGCTCTGTGGGGCATTTT
CACTGGCTTTATGTTCATTGGTTCTCTGTGCTACCCAACGGCGAAACAAGTGGTATTTGGTTCTCTGACCATCTTGTTTG
CTCTGCTGGCTGCTCGTGATTTCACTGGTAGCGAGCTGATTGGTACTATCGCAGGTTTTGAAGGCATCTTCTGTGGCGCG
AGCGCTATCTACTTCGCTATGGCACAAGTACTCAATAATGAATACGGCCGTGTTGTTCTGCCAATCGGCGAAAAACGTGT
GCAGCCAGTGAAAGCGCAAGAGCTTGCTGCATAA

Upstream 100 bases:

>100_bases
GTTTCCAATAAGATCTTTTTTCTTTTATCTGCCTGTTAATTAAAATCCGCGCGTAATTTTTACAAACATTTTTGAATTCA
CACTCTGAAGGTAAGTTCAC

Downstream 100 bases:

>100_bases
GTCAAACATTTGGGAACATGTAAAGGGTTAGCCATCGGCTAGCCCTTTTTTATGGGCGATTTTCAACGGAGTGAGGAGAG
GGAAGCTCACAACGTTTGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 196

Protein sequence:

>197_residues
MSTKLANPAPLGLMGFGMTTILLNIHNAGFFPIDSMILAMGIFYGGLSQVIVGIMCFKRGDTFGTTAFTSYGLFWLTLVG
LIVMPHMGLPASPAPFMGWYLALWGIFTGFMFIGSLCYPTAKQVVFGSLTILFALLAARDFTGSELIGTIAGFEGIFCGA
SAIYFAMAQVLNNEYGRVVLPIGEKRVQPVKAQELAA

Sequences:

>Translated_197_residues
MSTKLANPAPLGLMGFGMTTILLNIHNAGFFPIDSMILAMGIFYGGLSQVIVGIMCFKRGDTFGTTAFTSYGLFWLTLVG
LIVMPHMGLPASPAPFMGWYLALWGIFTGFMFIGSLCYPTAKQVVFGSLTILFALLAARDFTGSELIGTIAGFEGIFCGA
SAIYFAMAQVLNNEYGRVVLPIGEKRVQPVKAQELAA
>Mature_196_residues
STKLANPAPLGLMGFGMTTILLNIHNAGFFPIDSMILAMGIFYGGLSQVIVGIMCFKRGDTFGTTAFTSYGLFWLTLVGL
IVMPHMGLPASPAPFMGWYLALWGIFTGFMFIGSLCYPTAKQVVFGSLTILFALLAARDFTGSELIGTIAGFEGIFCGAS
AIYFAMAQVLNNEYGRVVLPIGEKRVQPVKAQELAA

Specific function: Unknown

COG id: COG1584

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GPR1/FUN34/yaaH family [H]

Homologues:

Organism=Escherichia coli, GI1786191, Length=186, Percent_Identity=61.2903225806452, Blast_Score=224, Evalue=3e-60,
Organism=Saccharomyces cerevisiae, GI6324329, Length=201, Percent_Identity=33.8308457711443, Blast_Score=77, Evalue=3e-15,
Organism=Saccharomyces cerevisiae, GI6319855, Length=114, Percent_Identity=39.4736842105263, Blast_Score=69, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000791 [H]

Pfam domain/function: PF01184 Grp1_Fun34_YaaH [H]

EC number: NA

Molecular weight: Translated: 21120; Mature: 20989

Theoretical pI: Translated: 8.04; Mature: 8.04

Prosite motif: PS01114 GPR1_FUN34_YAAH

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTKLANPAPLGLMGFGMTTILLNIHNAGFFPIDSMILAMGIFYGGLSQVIVGIMCFKRG
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCC
DTFGTTAFTSYGLFWLTLVGLIVMPHMGLPASPAPFMGWYLALWGIFTGFMFIGSLCYPT
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHH
AKQVVFGSLTILFALLAARDFTGSELIGTIAGFEGIFCGASAIYFAMAQVLNNEYGRVVL
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE
PIGEKRVQPVKAQELAA
ECCCCCCCCCCHHHHCC
>Mature Secondary Structure 
STKLANPAPLGLMGFGMTTILLNIHNAGFFPIDSMILAMGIFYGGLSQVIVGIMCFKRG
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCC
DTFGTTAFTSYGLFWLTLVGLIVMPHMGLPASPAPFMGWYLALWGIFTGFMFIGSLCYPT
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHH
AKQVVFGSLTILFALLAARDFTGSELIGTIAGFEGIFCGASAIYFAMAQVLNNEYGRVVL
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE
PIGEKRVQPVKAQELAA
ECCCCCCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]