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The map label for this gene is rimP

Identifier: 147673580

GI number: 147673580

Start: 174138

End: 174593

Strand: Direct

Name: rimP

Synonym: VC0395_A0172

Alternate gene names: 147673580

Gene position: 174138-174593 (Clockwise)

Preceding gene: 147675589

Following gene: 147674353

Centisome position: 5.76

GC content: 44.96

Gene sequence:

>456_bases
ATGACTGGTTTAGAAAGACAACTTACTGAAATGCTTGAAGCTCCGGTGGTTGCTGCAGGTTACGAGTTGGTTGGATTAGA
GTTCGTCCGTGCAGGGCAACATTCCACACTACGTATCTTTATTGATCACGAAAACGGTATCACAGTGGAAGACTGCGCAG
AAGTAAGTCGCCAAGTGAGTGCTGTTTTGGATGTTGAAGACCCTATTTCGGTCGTTTACAACCTCGAAGTGTCTTCTCCT
GGTCTAGAAAGACCACTCTTTAAAGCAGCACATTACGAGCAGTTTATTGGTCACGAGGTCAGCATCGTTTTGAAGATGGC
TGTTGGCAACCGTCGCAAGTGGAAAGGGGTCATCCAATCAATTGATGGTGAAACCGTAGCCGTGATGGTTGATGGGCAAG
AAGAACACTTTGCCTTAAGCAACATTTCAAAAGCTAACCTGATCCCTAAATTTTAA

Upstream 100 bases:

>100_bases
GGGTTTTTTATTATCTAAATTTCCTTTTTAAGGGTTTTAGGTATTTGCTTGGTATTTAAATTGGGCTCTAAGCCCTTTTT
TTGTTTCTGGAGTGGTTTAG

Downstream 100 bases:

>100_bases
GTCTTTGAGGCTAGAACAATGAGTAAAGAAATTTTAGCGGTAGTTGAGGCGGTTTCTAACGAGAAAGCGGTACCTCGTGA
GCGTATTTTTGAAGCGCTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 150

Protein sequence:

>151_residues
MTGLERQLTEMLEAPVVAAGYELVGLEFVRAGQHSTLRIFIDHENGITVEDCAEVSRQVSAVLDVEDPISVVYNLEVSSP
GLERPLFKAAHYEQFIGHEVSIVLKMAVGNRRKWKGVIQSIDGETVAVMVDGQEEHFALSNISKANLIPKF

Sequences:

>Translated_151_residues
MTGLERQLTEMLEAPVVAAGYELVGLEFVRAGQHSTLRIFIDHENGITVEDCAEVSRQVSAVLDVEDPISVVYNLEVSSP
GLERPLFKAAHYEQFIGHEVSIVLKMAVGNRRKWKGVIQSIDGETVAVMVDGQEEHFALSNISKANLIPKF
>Mature_150_residues
TGLERQLTEMLEAPVVAAGYELVGLEFVRAGQHSTLRIFIDHENGITVEDCAEVSRQVSAVLDVEDPISVVYNLEVSSPG
LERPLFKAAHYEQFIGHEVSIVLKMAVGNRRKWKGVIQSIDGETVAVMVDGQEEHFALSNISKANLIPKF

Specific function: Required for maturation of 30S ribosomal subunits

COG id: COG0779

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rimP family

Homologues:

Organism=Escherichia coli, GI226510978, Length=151, Percent_Identity=67.5496688741722, Blast_Score=219, Evalue=6e-59,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RIMP_VIBC3 (A5F924)

Other databases:

- EMBL:   CP000627
- EMBL:   CP001235
- ProteinModelPortal:   A5F924
- SMR:   A5F924
- STRING:   A5F924
- GenomeReviews:   CP000627_GR
- GenomeReviews:   CP001235_GR
- KEGG:   vco:VC0395_A0172
- eggNOG:   COG0779
- HOGENOM:   HBG668072
- OMA:   VMDVEDP
- ProtClustDB:   PRK00092
- BioCyc:   VCHO345073:VC0395_A0172-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01077
- InterPro:   IPR003728

Pfam domain/function: PF02576 DUF150

EC number: NA

Molecular weight: Translated: 16677; Mature: 16546

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGLERQLTEMLEAPVVAAGYELVGLEFVRAGQHSTLRIFIDHENGITVEDCAEVSRQVS
CCCHHHHHHHHHHCCEECCCHHHHHHHHEECCCCCEEEEEEECCCCCCHHHHHHHHHHHH
AVLDVEDPISVVYNLEVSSPGLERPLFKAAHYEQFIGHEVSIVLKMAVGNRRKWKGVIQS
HHCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHC
IDGETVAVMVDGQEEHFALSNISKANLIPKF
CCCCEEEEEECCCCHHEEHHCCCCCCCCCCC
>Mature Secondary Structure 
TGLERQLTEMLEAPVVAAGYELVGLEFVRAGQHSTLRIFIDHENGITVEDCAEVSRQVS
CCHHHHHHHHHHCCEECCCHHHHHHHHEECCCCCEEEEEEECCCCCCHHHHHHHHHHHH
AVLDVEDPISVVYNLEVSSPGLERPLFKAAHYEQFIGHEVSIVLKMAVGNRRKWKGVIQS
HHCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHC
IDGETVAVMVDGQEEHFALSNISKANLIPKF
CCCCEEEEEECCCCHHEEHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA