Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is iorA [H]
Identifier: 146343886
GI number: 146343886
Start: 7451584
End: 7452072
Strand: Reverse
Name: iorA [H]
Synonym: BRADO7137
Alternate gene names: 146343886
Gene position: 7452072-7451584 (Counterclockwise)
Preceding gene: 146343889
Following gene: 146343885
Centisome position: 99.94
GC content: 64.83
Gene sequence:
>489_bases ATGCCTAATCTCACCATCAATGGGCGGACCATGTCCGTCGATGCGGCGAACGACACGCCGCTGCTATGGGTCATCCGCGA GCAGTTGCAGATGACCGGCACCAAGTTCGGCTGCGGCGCGGGGCTGTGCGGCGCCTGCACCGTGCACGTCAACGGCGAGG CGGTGCGCTCGTGCCAGACCATGGTCGGCGACGTCAAGGACAAGAAGATCACCACCATCGAGGGCCTGTCGCAGAAGGGC GACCATCCCTTGCAGAAGGCGTGGATCGCCGAGCAGGTGCCGCAATGCGGCTACTGCCAGTCGGGGCAGATCATGCAGGC GGCCTCGCTGCTCGCCAAGACCACGAGCCCGACCAAGGAGGAGATCACAGCGCATATGGACGGCAATCTCTGCCGCTGCA TGACCTATTCGCGGATCCAGAAGGCGATCCAGCGCGCCGCATCCGAGATGCGCACCGCGTCGAACACCAGCGACCGGAGG GCGACATGA
Upstream 100 bases:
>100_bases TTCTTTCGCGCAGGCTGGCATCGAACCGGTGGGTGCCGGCGTCCTCACAAACCGAACTTCGCCGTAAGCGAAGTCGTATG CCGGGCGGGGAAGAAACCAC
Downstream 100 bases:
>100_bases ACCAGCACGTGAAAGCAGCGCCCACCATGGCCACAGATCTCAGCCGCCGCTCCTTCCTGGTCGGCACCGCCGCCACCGGC CTCGTGCTCGGCTATGCCGG
Product: putative aldehyde dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 162; Mature: 161
Protein sequence:
>162_residues MPNLTINGRTMSVDAANDTPLLWVIREQLQMTGTKFGCGAGLCGACTVHVNGEAVRSCQTMVGDVKDKKITTIEGLSQKG DHPLQKAWIAEQVPQCGYCQSGQIMQAASLLAKTTSPTKEEITAHMDGNLCRCMTYSRIQKAIQRAASEMRTASNTSDRR AT
Sequences:
>Translated_162_residues MPNLTINGRTMSVDAANDTPLLWVIREQLQMTGTKFGCGAGLCGACTVHVNGEAVRSCQTMVGDVKDKKITTIEGLSQKG DHPLQKAWIAEQVPQCGYCQSGQIMQAASLLAKTTSPTKEEITAHMDGNLCRCMTYSRIQKAIQRAASEMRTASNTSDRR AT >Mature_161_residues PNLTINGRTMSVDAANDTPLLWVIREQLQMTGTKFGCGAGLCGACTVHVNGEAVRSCQTMVGDVKDKKITTIEGLSQKGD HPLQKAWIAEQVPQCGYCQSGQIMQAASLLAKTTSPTKEEITAHMDGNLCRCMTYSRIQKAIQRAASEMRTASNTSDRRA T
Specific function: Specific towards N-containing N-heterocyclic substrates, including isoquinoline, isoquinolin-5-ol, phthalazine and quinazoline [H]
COG id: COG2080
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]
Homologues:
Organism=Homo sapiens, GI91823271, Length=155, Percent_Identity=33.5483870967742, Blast_Score=65, Evalue=3e-11, Organism=Escherichia coli, GI1786480, Length=169, Percent_Identity=40.2366863905325, Blast_Score=116, Evalue=6e-28, Organism=Escherichia coli, GI1789232, Length=142, Percent_Identity=39.4366197183099, Blast_Score=89, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17540638, Length=149, Percent_Identity=36.241610738255, Blast_Score=92, Evalue=1e-19, Organism=Caenorhabditis elegans, GI32566215, Length=158, Percent_Identity=30.379746835443, Blast_Score=86, Evalue=9e-18, Organism=Caenorhabditis elegans, GI17539860, Length=152, Percent_Identity=31.5789473684211, Blast_Score=86, Evalue=9e-18, Organism=Drosophila melanogaster, GI17737937, Length=157, Percent_Identity=32.484076433121, Blast_Score=87, Evalue=3e-18, Organism=Drosophila melanogaster, GI24647197, Length=160, Percent_Identity=34.375, Blast_Score=84, Evalue=5e-17, Organism=Drosophila melanogaster, GI24647195, Length=162, Percent_Identity=33.9506172839506, Blast_Score=81, Evalue=3e-16, Organism=Drosophila melanogaster, GI24647201, Length=154, Percent_Identity=36.3636363636364, Blast_Score=81, Evalue=3e-16, Organism=Drosophila melanogaster, GI24647199, Length=160, Percent_Identity=35, Blast_Score=80, Evalue=6e-16, Organism=Drosophila melanogaster, GI24647193, Length=162, Percent_Identity=35.1851851851852, Blast_Score=79, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002888 - InterPro: IPR006058 - InterPro: IPR012675 - InterPro: IPR001041 [H]
Pfam domain/function: PF00111 Fer2; PF01799 Fer2_2 [H]
EC number: =1.3.99.16 [H]
Molecular weight: Translated: 17538; Mature: 17407
Theoretical pI: Translated: 8.41; Mature: 8.41
Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.9 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 9.9 %Cys+Met (Translated Protein) 5.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 9.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNLTINGRTMSVDAANDTPLLWVIREQLQMTGTKFGCGAGLCGACTVHVNGEAVRSCQT CCCCEECCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEECHHHHHHHHH MVGDVKDKKITTIEGLSQKGDHPLQKAWIAEQVPQCGYCQSGQIMQAASLLAKTTSPTKE HHCCCCCCEEEHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCHH EITAHMDGNLCRCMTYSRIQKAIQRAASEMRTASNTSDRRAT HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure PNLTINGRTMSVDAANDTPLLWVIREQLQMTGTKFGCGAGLCGACTVHVNGEAVRSCQT CCCEECCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEECHHHHHHHHH MVGDVKDKKITTIEGLSQKGDHPLQKAWIAEQVPQCGYCQSGQIMQAASLLAKTTSPTKE HHCCCCCCEEEHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCHH EITAHMDGNLCRCMTYSRIQKAIQRAASEMRTASNTSDRRAT HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7782304; 8157655 [H]