| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146343860
Identifier: 146343860
GI number: 146343860
Start: 7422270
End: 7423439
Strand: Reverse
Name: 146343860
Synonym: BRADO7110
Alternate gene names: NA
Gene position: 7423439-7422270 (Counterclockwise)
Preceding gene: 146343861
Following gene: 146343858
Centisome position: 99.56
GC content: 65.04
Gene sequence:
>1170_bases GTGAATTGGAATTGGAATTGGAATAATATGCAGGTTGCGGAAAGCTCTGTGATCGCTTGCGTCGGCAACGTCTATCAGGC CGCGTACGATCCGATCCTCTGGCCAGAGGCTGTCGAATCGCTACGGATGTTGTTCGACGGATCGAGGGCCTGCCTGGTGC GCATCGGGCCCGAGCGGCGGCCGGACGATCTGATCGCCCCTAACAACGATCCCGCCTTCCAGGGCCGCTACATTGCCGAG TTCGCCGACGAGCCCAACATCATCGAGCAGGCGGTTGCGAGGGCGGAGGTCGGCTCGGCCTACAGCGATCTGCGCTTCAT CGGCAGGGAGACGCTGCGATCGAGCCGCCTGTGGAACGAGTGGATGGCGCCGCAGGACATGTATGGCGGCTTGACCTGCA AGCTCGCCTCGGCCGGTCAATCGACGTGGTTCTTCGACGTGCAGCGTGGCCGCTGCCAAACATCGTTCGATGCGGCTGAT CTCGACCTGATGCGAACGCTGGCGCCGCATCTCTCCCGCGCCATCGAGATTTCGCGACAGACGCGAATTGCGCAGCTGGT CTCCACGAGCCTGTCGCATCTGCCGTTCGCCGTGATGGCCGTCGATGCGGGGTTGCGTATTCTGGCCAGCAATGCGGCGG CGGAGCAAATCCTGTCGGATCGTGACAGCGGCCTGTCGCAGCGCCGGGGCGTGCTCGCGACATCGGACGTCCAGAGCACG ATCAAGCTGCAGCGGCTCGTCGTCGCATCCTGTGCGGCAGAGTCCGGAAGCCTTCCAGGCCTCGGCGGCGATCTGCTCGT CGTACCGCCGGCGCAGACGAATGATTCTGCAGGACTCGCGATCTCAGTTGGTCCGTCGCTGGGAGCCGGTGTGCCGACCC ACGCTCTCGAGCCCTGTGCGGTCGTGATCGCGCGCCGGTTGTCGCAGCAGCTGCCTGCCGGTTTCGACGACGCCATCGCG CAGGTCTTCGAGCTGACGCCGCAGGAGGCGCGCGTTGGCGCGGCGATCGCGGCCGGGCAATCGCTCAAACAGGCTGCCGA CCTGATCGGGATTCGGGTGAGCACCGCGCGCACCCATCTCGGGCGGATCTTCAGCAAGACGGGCACCCGCCAGCAGAGCC AGCTCGTCGCCTTGCTGAGAAGCGTGCAAGTCGCGCTGCCTCGCAAATAG
Upstream 100 bases:
>100_bases TTAGGTGATCGCACCCGTCCGGCGGTCGCTTTTCCGCGACCAATGAGGGTCATATCCGACCGTATCGGACGGGAGCCGCA GCGCGCAGCTGGCCGCTCGA
Downstream 100 bases:
>100_bases GCGACATCGCCGCGTCAGGTCATCAGGCGTCCGCATGCTCTGGCGAGAGCCAGCGCGCCGAGCGCCAGGAGCACCAGGCT GGCGAGCTTGCTGCTCAGGG
Product: LuxR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator LuxR Family Protein; Transcriptional Regulator LuxR Family; Regulatory Protein LuxR; Transcriptionat Regulator LuxR Family
Number of amino acids: Translated: 389; Mature: 389
Protein sequence:
>389_residues MNWNWNWNNMQVAESSVIACVGNVYQAAYDPILWPEAVESLRMLFDGSRACLVRIGPERRPDDLIAPNNDPAFQGRYIAE FADEPNIIEQAVARAEVGSAYSDLRFIGRETLRSSRLWNEWMAPQDMYGGLTCKLASAGQSTWFFDVQRGRCQTSFDAAD LDLMRTLAPHLSRAIEISRQTRIAQLVSTSLSHLPFAVMAVDAGLRILASNAAAEQILSDRDSGLSQRRGVLATSDVQST IKLQRLVVASCAAESGSLPGLGGDLLVVPPAQTNDSAGLAISVGPSLGAGVPTHALEPCAVVIARRLSQQLPAGFDDAIA QVFELTPQEARVGAAIAAGQSLKQAADLIGIRVSTARTHLGRIFSKTGTRQQSQLVALLRSVQVALPRK
Sequences:
>Translated_389_residues MNWNWNWNNMQVAESSVIACVGNVYQAAYDPILWPEAVESLRMLFDGSRACLVRIGPERRPDDLIAPNNDPAFQGRYIAE FADEPNIIEQAVARAEVGSAYSDLRFIGRETLRSSRLWNEWMAPQDMYGGLTCKLASAGQSTWFFDVQRGRCQTSFDAAD LDLMRTLAPHLSRAIEISRQTRIAQLVSTSLSHLPFAVMAVDAGLRILASNAAAEQILSDRDSGLSQRRGVLATSDVQST IKLQRLVVASCAAESGSLPGLGGDLLVVPPAQTNDSAGLAISVGPSLGAGVPTHALEPCAVVIARRLSQQLPAGFDDAIA QVFELTPQEARVGAAIAAGQSLKQAADLIGIRVSTARTHLGRIFSKTGTRQQSQLVALLRSVQVALPRK >Mature_389_residues MNWNWNWNNMQVAESSVIACVGNVYQAAYDPILWPEAVESLRMLFDGSRACLVRIGPERRPDDLIAPNNDPAFQGRYIAE FADEPNIIEQAVARAEVGSAYSDLRFIGRETLRSSRLWNEWMAPQDMYGGLTCKLASAGQSTWFFDVQRGRCQTSFDAAD LDLMRTLAPHLSRAIEISRQTRIAQLVSTSLSHLPFAVMAVDAGLRILASNAAAEQILSDRDSGLSQRRGVLATSDVQST IKLQRLVVASCAAESGSLPGLGGDLLVVPPAQTNDSAGLAISVGPSLGAGVPTHALEPCAVVIARRLSQQLPAGFDDAIA QVFELTPQEARVGAAIAAGQSLKQAADLIGIRVSTARTHLGRIFSKTGTRQQSQLVALLRSVQVALPRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41903; Mature: 41903
Theoretical pI: Translated: 6.91; Mature: 6.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNWNWNWNNMQVAESSVIACVGNVYQAAYDPILWPEAVESLRMLFDGSRACLVRIGPERR CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCC PDDLIAPNNDPAFQGRYIAEFADEPNIIEQAVARAEVGSAYSDLRFIGRETLRSSRLWNE CCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH WMAPQDMYGGLTCKLASAGQSTWFFDVQRGRCQTSFDAADLDLMRTLAPHLSRAIEISRQ HCCCHHHCCCEEEEEECCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH TRIAQLVSTSLSHLPFAVMAVDAGLRILASNAAAEQILSDRDSGLSQRRGVLATSDVQST HHHHHHHHHHHHHCCEEEEHHHCCHHEEECHHHHHHHHHHHCCCHHHHCCCEEEHHHHHH IKLQRLVVASCAAESGSLPGLGGDLLVVPPAQTNDSAGLAISVGPSLGAGVPTHALEPCA HHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCEEEEECCCCCCCCCCHHCCHHH VVIARRLSQQLPAGFDDAIAQVFELTPQEARVGAAIAAGQSLKQAADLIGIRVSTARTHL HHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHH GRIFSKTGTRQQSQLVALLRSVQVALPRK HHHHHHCCCHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNWNWNWNNMQVAESSVIACVGNVYQAAYDPILWPEAVESLRMLFDGSRACLVRIGPERR CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCC PDDLIAPNNDPAFQGRYIAEFADEPNIIEQAVARAEVGSAYSDLRFIGRETLRSSRLWNE CCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH WMAPQDMYGGLTCKLASAGQSTWFFDVQRGRCQTSFDAADLDLMRTLAPHLSRAIEISRQ HCCCHHHCCCEEEEEECCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH TRIAQLVSTSLSHLPFAVMAVDAGLRILASNAAAEQILSDRDSGLSQRRGVLATSDVQST HHHHHHHHHHHHHCCEEEEHHHCCHHEEECHHHHHHHHHHHCCCHHHHCCCEEEHHHHHH IKLQRLVVASCAAESGSLPGLGGDLLVVPPAQTNDSAGLAISVGPSLGAGVPTHALEPCA HHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCEEEEECCCCCCCCCCHHCCHHH VVIARRLSQQLPAGFDDAIAQVFELTPQEARVGAAIAAGQSLKQAADLIGIRVSTARTHL HHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHH GRIFSKTGTRQQSQLVALLRSVQVALPRK HHHHHHCCCHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA