Click here to switch to the map view.

The map label for this gene is potC [H]

Identifier: 146343840

GI number: 146343840

Start: 7402966

End: 7403763

Strand: Reverse

Name: potC [H]

Synonym: BRADO7090

Alternate gene names: 146343840

Gene position: 7403763-7402966 (Counterclockwise)

Preceding gene: 146343841

Following gene: 146343839

Centisome position: 99.29

GC content: 67.67

Gene sequence:

>798_bases
ATGACGCGCACGGCCATTATCATCTGCTGGATGCTCGCGATCGGCCTCGCGCTGTTCCTGATCCTGCCGCTCGCCGTCAT
CGCCGCGGCGTCGTTCTCGCCGACGCCGGTGTTCGATCTGCCGCTGTCGGGCGCGTCGCTGCGCTGGTACGGCCGCGTCG
GCCGGCTCGACGGCTTCTGGCCGTCGCTGTCGCTGTCGCTGCAAATCGCGGTGCTGTCGACCGCGTTGTCGCTGGTCGCC
GGCACGCTGGCCGCCATCGCCATCGCCCGCGGCAGGCTGCCCGGCGCAACGGCGCTCGGCACGCTGCTGGTGTCGCCGCT
GATGATGCCCGGCCTCGTGCTCGGCATCGCGCTGCTGCAATATTTCCGCATGATCGGCTTCACCGCGACCTGGAGCGCGC
TGCTGGTGGCTCATCTCGTGGTGACGCTTCCGTATGTCGCGCGCACCATGATCGCCGGCCTGTCGCGCTTCGACTTCACC
CTGATCGAGGCCGCGCGCACACTCGGCTGCACCTATGCCGGCAGCGTGCTCCGGGTGATGGTGCCGGCGCTGGCGCCGTC
GTTCCTGATCTCGGGCTTGTTCAGCCTGCTCGCCTCGTTCGACAACTATCCGGTCTCGATCTTCCTGACCGATGTCCGCT
CCAAGACGCTGCCGATCCGCATGCTGCAATATATCGAGGAGGCGCCCGATCCCACCCTCGCCGCGCTCTCCACCCTCATT
CTCGGCGGCACGCTGGTGCTACTGTTGATCAGCGATCGCCTGGTCGGCCTGCATCGCATGGCCGGAACCGCGGATTGA

Upstream 100 bases:

>100_bases
CGCGCGAGCCCGGCTTCGGCGCCGCCGCCGGCGTCGTGCTGCTGGCGATTGCGGTGATCGTCGTGGCGCTCAGCACGATG
CTGTCGCGGGAGCCGAAATG

Downstream 100 bases:

>100_bases
CACCATGAGCTCACAGCCCGTCATCCGTCGCGATCTCGTTGGCTACGCCAGCAAGCCGCCGCATCCGCATTGGCCCGGTG
AGGCGCGTGTCGCGGTGTCG

Product: putative sperimidine/putrescine ABC transporter permease

Products: Phosphate; putrescine [Cytoplasm]; ADP; spermidine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 264

Protein sequence:

>265_residues
MTRTAIIICWMLAIGLALFLILPLAVIAAASFSPTPVFDLPLSGASLRWYGRVGRLDGFWPSLSLSLQIAVLSTALSLVA
GTLAAIAIARGRLPGATALGTLLVSPLMMPGLVLGIALLQYFRMIGFTATWSALLVAHLVVTLPYVARTMIAGLSRFDFT
LIEAARTLGCTYAGSVLRVMVPALAPSFLISGLFSLLASFDNYPVSIFLTDVRSKTLPIRMLQYIEEAPDPTLAALSTLI
LGGTLVLLLISDRLVGLHRMAGTAD

Sequences:

>Translated_265_residues
MTRTAIIICWMLAIGLALFLILPLAVIAAASFSPTPVFDLPLSGASLRWYGRVGRLDGFWPSLSLSLQIAVLSTALSLVA
GTLAAIAIARGRLPGATALGTLLVSPLMMPGLVLGIALLQYFRMIGFTATWSALLVAHLVVTLPYVARTMIAGLSRFDFT
LIEAARTLGCTYAGSVLRVMVPALAPSFLISGLFSLLASFDNYPVSIFLTDVRSKTLPIRMLQYIEEAPDPTLAALSTLI
LGGTLVLLLISDRLVGLHRMAGTAD
>Mature_264_residues
TRTAIIICWMLAIGLALFLILPLAVIAAASFSPTPVFDLPLSGASLRWYGRVGRLDGFWPSLSLSLQIAVLSTALSLVAG
TLAAIAIARGRLPGATALGTLLVSPLMMPGLVLGIALLQYFRMIGFTATWSALLVAHLVVTLPYVARTMIAGLSRFDFTL
IEAARTLGCTYAGSVLRVMVPALAPSFLISGLFSLLASFDNYPVSIFLTDVRSKTLPIRMLQYIEEAPDPTLAALSTLIL
GGTLVLLLISDRLVGLHRMAGTAD

Specific function: Required for the activity of the bacterial periplasmic transport system of putrescine and spermidine [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787368, Length=226, Percent_Identity=27.4336283185841, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI1787714, Length=219, Percent_Identity=32.4200913242009, Blast_Score=88, Evalue=6e-19,
Organism=Escherichia coli, GI1787081, Length=231, Percent_Identity=28.5714285714286, Blast_Score=81, Evalue=9e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 28131; Mature: 28000

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRTAIIICWMLAIGLALFLILPLAVIAAASFSPTPVFDLPLSGASLRWYGRVGRLDGFW
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCEEECCCCCCCCCCC
PSLSLSLQIAVLSTALSLVAGTLAAIAIARGRLPGATALGTLLVSPLMMPGLVLGIALLQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
YFRMIGFTATWSALLVAHLVVTLPYVARTMIAGLSRFDFTLIEAARTLGCTYAGSVLRVM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VPALAPSFLISGLFSLLASFDNYPVSIFLTDVRSKTLPIRMLQYIEEAPDPTLAALSTLI
HHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHH
LGGTLVLLLISDRLVGLHRMAGTAD
HHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TRTAIIICWMLAIGLALFLILPLAVIAAASFSPTPVFDLPLSGASLRWYGRVGRLDGFW
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCEEECCCCCCCCCCC
PSLSLSLQIAVLSTALSLVAGTLAAIAIARGRLPGATALGTLLVSPLMMPGLVLGIALLQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
YFRMIGFTATWSALLVAHLVVTLPYVARTMIAGLSRFDFTLIEAARTLGCTYAGSVLRVM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VPALAPSFLISGLFSLLASFDNYPVSIFLTDVRSKTLPIRMLQYIEEAPDPTLAALSTLI
HHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHH
LGGTLVLLLISDRLVGLHRMAGTAD
HHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Putrescine [Periplasm]; H2O; ATP; spermidine [Periplasm] [C]

Specific reaction: ATP + putrescine [Periplasm] + H2O = ADP + phosphate + putrescine [Cytoplasm] ATP + spermidine [Periplasm] + H2O = ADP + phosphate + spermidine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]