| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146343804
Identifier: 146343804
GI number: 146343804
Start: 7364602
End: 7365714
Strand: Reverse
Name: 146343804
Synonym: BRADO7053
Alternate gene names: NA
Gene position: 7365714-7364602 (Counterclockwise)
Preceding gene: 146343805
Following gene: 146343803
Centisome position: 98.78
GC content: 65.05
Gene sequence:
>1113_bases ATGTCTCGGCGCCTCGTGGTCTTCAACAACATGATCACTCCGTACACGAACAGACTCTATAACGCGCTGGTCGCGAAAGG GCTGGATCTCGCGGTGCTGTCGTGCACGGAGCAGGAGGCGGACCGCTCCTGGGCCGGCTCGTTCGAGCCGCGCTATCCGC ATCAAACCGTGACGGGGGTCTCGATACCCCTCAGCAGGTCGCGCTACACCCATGTCAACGTCGGCGTCTGTCGGGCTCTC AGCGGCCTCGCTCCCGCCGTGCTGATGGTCAACGGCTTCTATCCATCCATGCTCGCCGGTGCCGTCTGGGCGCAGCTGCG GGCACGGCCTCTCGCACTGACGATCGACGGGTGGCGCGAGACGATGCCGGACACGGCCTATCATCGTCTGGTGCGTCCCT GGCTGCTCCGACGCTGCCGTACTATCGTTTGCTGTGGAGAAAAGGGGCGGGACTATTTTTTGAGCCAGTCGATCGCTCCG GACCGGATCGCGACGGTTCCGCTCGTCCCGGCATGGGAGGCTCCGGCGGAGGTCTCGCCACTGTCAAGCAGGCCCTACGG TTTGCTGTGGTGCGCCAGGATCAACGATGACGCCAAGAACGCTGCTTTCTTCGAAAACGTCGCCATTGGCCTCTCCCGCT CAATCCGCCGCCTCAAGGTTCGCGTCGTCGGCTCCGGTCCGCTGGAGGGGCGCATGTTGTCGCGGCTTGCCGCTGCGGGA ATCGAGGTCCGCCACGATCCGTATGTGCCCTGGCATGCAATGGCCGAGGTCTACCTGCAGGCGCGGCTGCTGCTGCTGCC CTCGGTGCTCGAACCGTGGGGGCTCGTCTGCAACGAAGCGATGCAGTGCGGCGTCCCCTGCATCGTCTCGCCCCATGTCG GCGCAGCCGGTGATCTTGTTCGCGACGGAGACAGCGGTGTCGTCCGCGATCTCGACGAGCAGCTTTGGATCGAGGCGGCC AGCCTTCTGCTCGAAACCCCCGCGCTCTGGGACAAGCTGTCGAGGCGGGCGCGCCAAGCCATGCAACAGCGGTCGCTCGA GACAGCCGCGACGGCGTTCATGAAGGTTGCTGAAGGGCTTGTCGGTTCGGCCGTCAATGAGAGGGGCAGCTGA
Upstream 100 bases:
>100_bases GCTTCTGCTCGCGCTCGGCCCGGCTGTCGCAACCCGGCTCGCCACTTATCATTGTGCGGCGTTGTGTGAAATTGGTCGCG GGCCGCAGAGCGGATGATCG
Downstream 100 bases:
>100_bases TGCTCGCCAGATGGCTCGCTCGTGTCGATCTGTTTCTCTACGCCTATCTGGTAATGGTGCTCGGCTGCATCTATTTCCTG TTCAACTACGTCGAGGGCAT
Product: putative glycosyl transferase
Products: NA
Alternate protein names: Group 1 Glycosyl Transferase; Glycosyltransferase
Number of amino acids: Translated: 370; Mature: 369
Protein sequence:
>370_residues MSRRLVVFNNMITPYTNRLYNALVAKGLDLAVLSCTEQEADRSWAGSFEPRYPHQTVTGVSIPLSRSRYTHVNVGVCRAL SGLAPAVLMVNGFYPSMLAGAVWAQLRARPLALTIDGWRETMPDTAYHRLVRPWLLRRCRTIVCCGEKGRDYFLSQSIAP DRIATVPLVPAWEAPAEVSPLSSRPYGLLWCARINDDAKNAAFFENVAIGLSRSIRRLKVRVVGSGPLEGRMLSRLAAAG IEVRHDPYVPWHAMAEVYLQARLLLLPSVLEPWGLVCNEAMQCGVPCIVSPHVGAAGDLVRDGDSGVVRDLDEQLWIEAA SLLLETPALWDKLSRRARQAMQQRSLETAATAFMKVAEGLVGSAVNERGS
Sequences:
>Translated_370_residues MSRRLVVFNNMITPYTNRLYNALVAKGLDLAVLSCTEQEADRSWAGSFEPRYPHQTVTGVSIPLSRSRYTHVNVGVCRAL SGLAPAVLMVNGFYPSMLAGAVWAQLRARPLALTIDGWRETMPDTAYHRLVRPWLLRRCRTIVCCGEKGRDYFLSQSIAP DRIATVPLVPAWEAPAEVSPLSSRPYGLLWCARINDDAKNAAFFENVAIGLSRSIRRLKVRVVGSGPLEGRMLSRLAAAG IEVRHDPYVPWHAMAEVYLQARLLLLPSVLEPWGLVCNEAMQCGVPCIVSPHVGAAGDLVRDGDSGVVRDLDEQLWIEAA SLLLETPALWDKLSRRARQAMQQRSLETAATAFMKVAEGLVGSAVNERGS >Mature_369_residues SRRLVVFNNMITPYTNRLYNALVAKGLDLAVLSCTEQEADRSWAGSFEPRYPHQTVTGVSIPLSRSRYTHVNVGVCRALS GLAPAVLMVNGFYPSMLAGAVWAQLRARPLALTIDGWRETMPDTAYHRLVRPWLLRRCRTIVCCGEKGRDYFLSQSIAPD RIATVPLVPAWEAPAEVSPLSSRPYGLLWCARINDDAKNAAFFENVAIGLSRSIRRLKVRVVGSGPLEGRMLSRLAAAGI EVRHDPYVPWHAMAEVYLQARLLLLPSVLEPWGLVCNEAMQCGVPCIVSPHVGAAGDLVRDGDSGVVRDLDEQLWIEAAS LLLETPALWDKLSRRARQAMQQRSLETAATAFMKVAEGLVGSAVNERGS
Specific function: Unknown
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40760; Mature: 40628
Theoretical pI: Translated: 8.78; Mature: 8.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRRLVVFNNMITPYTNRLYNALVAKGLDLAVLSCTEQEADRSWAGSFEPRYPHQTVTGV CCCCEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCHHHHCCCCCCCCCCCCCCCCCCCE SIPLSRSRYTHVNVGVCRALSGLAPAVLMVNGFYPSMLAGAVWAQLRARPLALTIDGWRE ECCCCCCCCEEEHHHHHHHHHCCCCCHHEECCCCHHHHHHHHHHHHCCCCEEEEECCHHH TMPDTAYHRLVRPWLLRRCRTIVCCGEKGRDYFLSQSIAPDRIATVPLVPAWEAPAEVSP CCCHHHHHHHHHHHHHHHHCEEEEECCCCCCCHHHCCCCCCCEEECCCCCCCCCCCCCCC LSSRPYGLLWCARINDDAKNAAFFENVAIGLSRSIRRLKVRVVGSGPLEGRMLSRLAAAG CCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCHHHHHHHHHCC IEVRHDPYVPWHAMAEVYLQARLLLLPSVLEPWGLVCNEAMQCGVPCIVSPHVGAAGDLV CEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCE RDGDSGVVRDLDEQLWIEAASLLLETPALWDKLSRRARQAMQQRSLETAATAFMKVAEGL ECCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGSAVNERGS HHHHHHCCCC >Mature Secondary Structure SRRLVVFNNMITPYTNRLYNALVAKGLDLAVLSCTEQEADRSWAGSFEPRYPHQTVTGV CCCEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCHHHHCCCCCCCCCCCCCCCCCCCE SIPLSRSRYTHVNVGVCRALSGLAPAVLMVNGFYPSMLAGAVWAQLRARPLALTIDGWRE ECCCCCCCCEEEHHHHHHHHHCCCCCHHEECCCCHHHHHHHHHHHHCCCCEEEEECCHHH TMPDTAYHRLVRPWLLRRCRTIVCCGEKGRDYFLSQSIAPDRIATVPLVPAWEAPAEVSP CCCHHHHHHHHHHHHHHHHCEEEEECCCCCCCHHHCCCCCCCEEECCCCCCCCCCCCCCC LSSRPYGLLWCARINDDAKNAAFFENVAIGLSRSIRRLKVRVVGSGPLEGRMLSRLAAAG CCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCHHHHHHHHHCC IEVRHDPYVPWHAMAEVYLQARLLLLPSVLEPWGLVCNEAMQCGVPCIVSPHVGAAGDLV CEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCE RDGDSGVVRDLDEQLWIEAASLLLETPALWDKLSRRARQAMQQRSLETAATAFMKVAEGL ECCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGSAVNERGS HHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA