| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146343803
Identifier: 146343803
GI number: 146343803
Start: 7363307
End: 7364602
Strand: Reverse
Name: 146343803
Synonym: BRADO7052
Alternate gene names: NA
Gene position: 7364602-7363307 (Counterclockwise)
Preceding gene: 146343804
Following gene: 146343802
Centisome position: 98.77
GC content: 59.72
Gene sequence:
>1296_bases ATGCTCGCCAGATGGCTCGCTCGTGTCGATCTGTTTCTCTACGCCTATCTGGTAATGGTGCTCGGCTGCATCTATTTCCT GTTCAACTACGTCGAGGGCATATCCTTCACCGAGCGCGCCGGTGAATCGGTGTTGTTTCGTGCCTGCTGGCTGGTTCTGT ACTTGCTGCTGCTGCTCCAGATCCTGCGCAATGCGCACGGCTTTGCAGCGGTGCTCTCGCGCTCCCGCTTGTTTCTGATC TTCCTTCTCTTTGCGTTTGTGTCGCAGCTTCACAGCGAAAGCGCCGATGCGGGCTACGTGAAGTTCGGGATGTATCTCGC GACCATCCTGTTCGGCGCCTTCCTCGCCGTGTCCTGCTCAGCCGACGAGCTGGTCGAAGCGCTGTTTCGGATCGGCGCGG TCACGCTTCTCGTCCACGTATTGTTGCTTCCCGTGATCGGGTCCGACGTTTCCTATGACGCCCTTCACCGGGCGACGATC TTGGGCACCGAAGCCTATGCAGGCATCTTCGGTCACAAGAATCTTGCAGGAGCCTTTTTTGGCTTGATGGTGATCATATC GCTGGTCCGCAGTCTGGCCGGACGGCGGTCGCAACGCGGATCGTCGGGCGCGGTCGCCGCCTGCCACGTTATGGCCCTCG CCGCGACGGGCGCGGCCGGACCGCTGATCAGTCTTGTCGCAACGCTCTTGGTGACTCTCGGACTTGCGCTCATCGTCATC GGCCGACGCGAGCTGGCGGCGATCTATTGGCTTGTGCTCGGCTTTGTCGGATTGGCGGTCATCGCTGTTCCGACCGAATG GCTCTATGGCCTCGTTGGCCGTACGGCTAATCTGACGGGCCGCTCCTTTCTCTGGTCGGTGTGGCCGCACTTCTTCTGGC AGCATCCATGGCTCGGTTATGGTTTCTCCGGCTTCTTCAACGGCCTGGAGAATGCGCCGTCGGCCGAGCTGACACGCATG GCGCCATGGAACACGGAATTCGGCTCGTTCGAGAATTCCTATCTGGACGCCCTGCTGCAATTCGGGCTGCTCGGCGGAGG CCTCTATCTGATGCTGGTGGCGACCGCCGTCCGGAACGTGGTTATGTTTGCATTCAGGGCGTCCGGAATGTTCTGGCTCG CGCCGTTTGCCGTGCTGATCTTCGTCATCATCGCCTCGCTCAACGACAGCAGCCAGCTGTTGCACAACTACTTTGGCTGC GTGTTGGTGTTCTGGTGCTATTTTGGTCCGGAAGCACAACTCGGACGATCGACGGTCAGCGTGAGTCGGCTCAGTTTGCG AGATTTGAAGGCATGA
Upstream 100 bases:
>100_bases GCCAAGCCATGCAACAGCGGTCGCTCGAGACAGCCGCGACGGCGTTCATGAAGGTTGCTGAAGGGCTTGTCGGTTCGGCC GTCAATGAGAGGGGCAGCTG
Downstream 100 bases:
>100_bases GAGGCGATGTCGTACGCCGCGGGAAGGAAGGAGTCCCAGAGGTCCTTCAAGGGCCCGGTCTCCGCCTGGATGCCTCGCCG CCGTTTTGGTCTCGTCTGAG
Product: putative exopolysaccharide biosynthesis protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 431; Mature: 431
Protein sequence:
>431_residues MLARWLARVDLFLYAYLVMVLGCIYFLFNYVEGISFTERAGESVLFRACWLVLYLLLLLQILRNAHGFAAVLSRSRLFLI FLLFAFVSQLHSESADAGYVKFGMYLATILFGAFLAVSCSADELVEALFRIGAVTLLVHVLLLPVIGSDVSYDALHRATI LGTEAYAGIFGHKNLAGAFFGLMVIISLVRSLAGRRSQRGSSGAVAACHVMALAATGAAGPLISLVATLLVTLGLALIVI GRRELAAIYWLVLGFVGLAVIAVPTEWLYGLVGRTANLTGRSFLWSVWPHFFWQHPWLGYGFSGFFNGLENAPSAELTRM APWNTEFGSFENSYLDALLQFGLLGGGLYLMLVATAVRNVVMFAFRASGMFWLAPFAVLIFVIIASLNDSSQLLHNYFGC VLVFWCYFGPEAQLGRSTVSVSRLSLRDLKA
Sequences:
>Translated_431_residues MLARWLARVDLFLYAYLVMVLGCIYFLFNYVEGISFTERAGESVLFRACWLVLYLLLLLQILRNAHGFAAVLSRSRLFLI FLLFAFVSQLHSESADAGYVKFGMYLATILFGAFLAVSCSADELVEALFRIGAVTLLVHVLLLPVIGSDVSYDALHRATI LGTEAYAGIFGHKNLAGAFFGLMVIISLVRSLAGRRSQRGSSGAVAACHVMALAATGAAGPLISLVATLLVTLGLALIVI GRRELAAIYWLVLGFVGLAVIAVPTEWLYGLVGRTANLTGRSFLWSVWPHFFWQHPWLGYGFSGFFNGLENAPSAELTRM APWNTEFGSFENSYLDALLQFGLLGGGLYLMLVATAVRNVVMFAFRASGMFWLAPFAVLIFVIIASLNDSSQLLHNYFGC VLVFWCYFGPEAQLGRSTVSVSRLSLRDLKA >Mature_431_residues MLARWLARVDLFLYAYLVMVLGCIYFLFNYVEGISFTERAGESVLFRACWLVLYLLLLLQILRNAHGFAAVLSRSRLFLI FLLFAFVSQLHSESADAGYVKFGMYLATILFGAFLAVSCSADELVEALFRIGAVTLLVHVLLLPVIGSDVSYDALHRATI LGTEAYAGIFGHKNLAGAFFGLMVIISLVRSLAGRRSQRGSSGAVAACHVMALAATGAAGPLISLVATLLVTLGLALIVI GRRELAAIYWLVLGFVGLAVIAVPTEWLYGLVGRTANLTGRSFLWSVWPHFFWQHPWLGYGFSGFFNGLENAPSAELTRM APWNTEFGSFENSYLDALLQFGLLGGGLYLMLVATAVRNVVMFAFRASGMFWLAPFAVLIFVIIASLNDSSQLLHNYFGC VLVFWCYFGPEAQLGRSTVSVSRLSLRDLKA
Specific function: Unknown
COG id: COG3307
COG function: function code M; Lipid A core - O-antigen ligase and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47234; Mature: 47234
Theoretical pI: Translated: 8.55; Mature: 8.55
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLARWLARVDLFLYAYLVMVLGCIYFLFNYVEGISFTERAGESVLFRACWLVLYLLLLLQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH ILRNAHGFAAVLSRSRLFLIFLLFAFVSQLHSESADAGYVKFGMYLATILFGAFLAVSCS HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCC ADELVEALFRIGAVTLLVHVLLLPVIGSDVSYDALHRATILGTEAYAGIFGHKNLAGAFF HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHCCCHHHHHHH GLMVIISLVRSLAGRRSQRGSSGAVAACHVMALAATGAAGPLISLVATLLVTLGLALIVI HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH GRRELAAIYWLVLGFVGLAVIAVPTEWLYGLVGRTANLTGRSFLWSVWPHFFWQHPWLGY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCC GFSGFFNGLENAPSAELTRMAPWNTEFGSFENSYLDALLQFGLLGGGLYLMLVATAVRNV CHHHHHHHHCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VMFAFRASGMFWLAPFAVLIFVIIASLNDSSQLLHNYFGCVLVFWCYFGPEAQLGRSTVS HHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHCHHHHH VSRLSLRDLKA HHHHHHHHCCC >Mature Secondary Structure MLARWLARVDLFLYAYLVMVLGCIYFLFNYVEGISFTERAGESVLFRACWLVLYLLLLLQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH ILRNAHGFAAVLSRSRLFLIFLLFAFVSQLHSESADAGYVKFGMYLATILFGAFLAVSCS HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCC ADELVEALFRIGAVTLLVHVLLLPVIGSDVSYDALHRATILGTEAYAGIFGHKNLAGAFF HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHCCCHHHHHHH GLMVIISLVRSLAGRRSQRGSSGAVAACHVMALAATGAAGPLISLVATLLVTLGLALIVI HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH GRRELAAIYWLVLGFVGLAVIAVPTEWLYGLVGRTANLTGRSFLWSVWPHFFWQHPWLGY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCC GFSGFFNGLENAPSAELTRMAPWNTEFGSFENSYLDALLQFGLLGGGLYLMLVATAVRNV CHHHHHHHHCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VMFAFRASGMFWLAPFAVLIFVIIASLNDSSQLLHNYFGCVLVFWCYFGPEAQLGRSTVS HHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHCHHHHH VSRLSLRDLKA HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA