| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is fabG [C]
Identifier: 146343676
GI number: 146343676
Start: 7193250
End: 7194308
Strand: Direct
Name: fabG [C]
Synonym: BRADO6919
Alternate gene names: 146343676
Gene position: 7193250-7194308 (Clockwise)
Preceding gene: 146343673
Following gene: 146343679
Centisome position: 96.47
GC content: 70.44
Gene sequence:
>1059_bases ATGCCCGCCTACAACATCTTCCGCCGCGGCCTCCTCAAGGGTACGGCCGCCGCGACCGCCTTCGCCGTGCTCAACCAGGC ATCCGCGCAGACCGGCGCGAACATCAGCCAGGACGGCCGCTCCGACACCGGTGCGCGCGAACTGCACGGCCAGTCGGTGC CGGAGCCGCCGCCGGAGAAGAGTGCCGGGCCGATCCGTCCCGGGCGCGGCTCGGCCCTGACCGGCAAGGTCGCCGTGGTG ACCGGCGCGGCGCGCGGCATCGGGCGGTCGATCGCGGTGGAGATGGCGGCCAACGGAGCCGATGTCGTGGCGCTTGATAT CGCCGGGCCGGTCTCGACCGCGTCCAACGCGGTGCCGGCCACGCCGGAGGACCTCGCCGAGACGGTGCGCCAGATCATGG CCTATGGCCGGCGCGGCGAAAGCATCCGCGCCGACATCCGCGACATCGCCGCCTTGCGTGCGGCCGCCGATCACGTCGAG CAGACCTACGGCAAGATCGACATCGTCGTCGCCGATGCCGCGATCCAGCGCTGGAAGCCGCTCCTGGAGATGGAGGATGC CGACTGGCGCGACGTGATCGACAACAATCTCAACGGCACCGCGAACACCATCCGCGCCTTCGCACCGAAGATGGTGGCGC GCAAGAGCGGCCGTATCATCGTGCTGTCGTCGATGCAGGGCAAGCACGGTACCAGGGACGCGGCGAGCTATTCGGCGTCG AAATGGGGCATCCTCGGGCTGATGAAATCAGCCGCGCTCGAGCTCGGTCAGCACAACATCACCGTGAACGCGCTGATCCC CGGCCTCGTCGACACCGCGCTGACGCGCTACGACACCAGGCTCAGCGAGGCGATCCGCGAGACCGGCCGCGAGGCGCCGG CGCAGCCGACGCCGCAGCAGGCCTGGGACGCCCGTGCGCCGACGGTTGCGCTCAAGGTCGGCTGGCTGCAGCCGGACGAC ATCTCGCCGGCCGCGGTGTTCCTCGCGTCCGTTGCGGCGGCGATGGTGACGGGCGCGGAGTATGAGGTGACGGCCGGCGA CAGCGCGAAGGATGTCTGA
Upstream 100 bases:
>100_bases TGATGGAGGATCAAGCGCCGCAACGGGCAAGCCGACCCGATTTCTGGAACGGCGGTGCGGGGCGACGGTTGTCAGCGACC GTCTCAAGGAGAGCCGCGCC
Downstream 100 bases:
>100_bases GGACGGCGGACCGATCAGCCGACCGCCCGATCGCGCGCGGGTTCGGCGAGCCAGGCCACCTCGGGCAGCGCCATCAGGGC CGGCTTGGCGAAGAAGTAGC
Product: putative short-chain dehydrogenase/reductase (SDR)
Products: (3R)-hydroxyacyl-[acyl-carrier-protein]; NADP; NADPH; Proton; beta-ketoacyl-ACP [C]
Alternate protein names: NA
Number of amino acids: Translated: 352; Mature: 351
Protein sequence:
>352_residues MPAYNIFRRGLLKGTAAATAFAVLNQASAQTGANISQDGRSDTGARELHGQSVPEPPPEKSAGPIRPGRGSALTGKVAVV TGAARGIGRSIAVEMAANGADVVALDIAGPVSTASNAVPATPEDLAETVRQIMAYGRRGESIRADIRDIAALRAAADHVE QTYGKIDIVVADAAIQRWKPLLEMEDADWRDVIDNNLNGTANTIRAFAPKMVARKSGRIIVLSSMQGKHGTRDAASYSAS KWGILGLMKSAALELGQHNITVNALIPGLVDTALTRYDTRLSEAIRETGREAPAQPTPQQAWDARAPTVALKVGWLQPDD ISPAAVFLASVAAAMVTGAEYEVTAGDSAKDV
Sequences:
>Translated_352_residues MPAYNIFRRGLLKGTAAATAFAVLNQASAQTGANISQDGRSDTGARELHGQSVPEPPPEKSAGPIRPGRGSALTGKVAVV TGAARGIGRSIAVEMAANGADVVALDIAGPVSTASNAVPATPEDLAETVRQIMAYGRRGESIRADIRDIAALRAAADHVE QTYGKIDIVVADAAIQRWKPLLEMEDADWRDVIDNNLNGTANTIRAFAPKMVARKSGRIIVLSSMQGKHGTRDAASYSAS KWGILGLMKSAALELGQHNITVNALIPGLVDTALTRYDTRLSEAIRETGREAPAQPTPQQAWDARAPTVALKVGWLQPDD ISPAAVFLASVAAAMVTGAEYEVTAGDSAKDV >Mature_351_residues PAYNIFRRGLLKGTAAATAFAVLNQASAQTGANISQDGRSDTGARELHGQSVPEPPPEKSAGPIRPGRGSALTGKVAVVT GAARGIGRSIAVEMAANGADVVALDIAGPVSTASNAVPATPEDLAETVRQIMAYGRRGESIRADIRDIAALRAAADHVEQ TYGKIDIVVADAAIQRWKPLLEMEDADWRDVIDNNLNGTANTIRAFAPKMVARKSGRIIVLSSMQGKHGTRDAASYSASK WGILGLMKSAALELGQHNITVNALIPGLVDTALTRYDTRLSEAIRETGREAPAQPTPQQAWDARAPTVALKVGWLQPDDI SPAAVFLASVAAAMVTGAEYEVTAGDSAKDV
Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]
COG id: COG1028
COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI15277342, Length=284, Percent_Identity=32.7464788732394, Blast_Score=118, Evalue=1e-26, Organism=Homo sapiens, GI4504505, Length=195, Percent_Identity=33.3333333333333, Blast_Score=96, Evalue=7e-20, Organism=Homo sapiens, GI32483357, Length=278, Percent_Identity=28.0575539568345, Blast_Score=86, Evalue=4e-17, Organism=Homo sapiens, GI20149619, Length=215, Percent_Identity=29.3023255813954, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI19923817, Length=281, Percent_Identity=25.9786476868327, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI223718074, Length=204, Percent_Identity=29.9019607843137, Blast_Score=79, Evalue=6e-15, Organism=Homo sapiens, GI7657478, Length=198, Percent_Identity=27.2727272727273, Blast_Score=78, Evalue=1e-14, Organism=Homo sapiens, GI40807363, Length=203, Percent_Identity=26.6009852216749, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI66933014, Length=268, Percent_Identity=28.7313432835821, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI10190704, Length=291, Percent_Identity=26.1168384879725, Blast_Score=74, Evalue=3e-13, Organism=Homo sapiens, GI25282469, Length=237, Percent_Identity=27.8481012658228, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI157739938, Length=212, Percent_Identity=23.5849056603774, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI142976729, Length=213, Percent_Identity=24.8826291079812, Blast_Score=73, Evalue=4e-13, Organism=Homo sapiens, GI40254992, Length=203, Percent_Identity=27.0935960591133, Blast_Score=72, Evalue=7e-13, Organism=Homo sapiens, GI31542939, Length=208, Percent_Identity=30.2884615384615, Blast_Score=72, Evalue=8e-13, Organism=Homo sapiens, GI210032110, Length=219, Percent_Identity=25.1141552511416, Blast_Score=72, Evalue=9e-13, Organism=Homo sapiens, GI126723750, Length=226, Percent_Identity=29.646017699115, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI7705925, Length=275, Percent_Identity=27.2727272727273, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI7706318, Length=201, Percent_Identity=26.3681592039801, Blast_Score=67, Evalue=3e-11, Organism=Homo sapiens, GI4503817, Length=206, Percent_Identity=25.2427184466019, Blast_Score=66, Evalue=4e-11, Organism=Homo sapiens, GI126723191, Length=201, Percent_Identity=28.3582089552239, Blast_Score=65, Evalue=8e-11, Organism=Escherichia coli, GI1787335, Length=274, Percent_Identity=32.1167883211679, Blast_Score=131, Evalue=8e-32, Organism=Escherichia coli, GI87082100, Length=280, Percent_Identity=34.2857142857143, Blast_Score=128, Evalue=5e-31, Organism=Escherichia coli, GI1789208, Length=279, Percent_Identity=32.9749103942652, Blast_Score=123, Evalue=2e-29, Organism=Escherichia coli, GI1790717, Length=275, Percent_Identity=29.4545454545455, Blast_Score=110, Evalue=9e-26, Organism=Escherichia coli, GI87082160, Length=275, Percent_Identity=29.4545454545455, Blast_Score=99, Evalue=3e-22, Organism=Escherichia coli, GI1787905, Length=274, Percent_Identity=31.7518248175182, Blast_Score=96, Evalue=3e-21, Organism=Escherichia coli, GI1788459, Length=204, Percent_Identity=29.4117647058824, Blast_Score=92, Evalue=6e-20, Organism=Escherichia coli, GI1789057, Length=278, Percent_Identity=28.4172661870504, Blast_Score=89, Evalue=4e-19, Organism=Escherichia coli, GI1789378, Length=282, Percent_Identity=25.531914893617, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1787526, Length=210, Percent_Identity=27.1428571428571, Blast_Score=62, Evalue=7e-11, Organism=Caenorhabditis elegans, GI17567345, Length=207, Percent_Identity=31.8840579710145, Blast_Score=115, Evalue=5e-26, Organism=Caenorhabditis elegans, GI25147288, Length=279, Percent_Identity=31.1827956989247, Blast_Score=104, Evalue=5e-23, Organism=Caenorhabditis elegans, GI17555706, Length=285, Percent_Identity=29.4736842105263, Blast_Score=103, Evalue=9e-23, Organism=Caenorhabditis elegans, GI17568967, Length=259, Percent_Identity=30.1158301158301, Blast_Score=99, Evalue=4e-21, Organism=Caenorhabditis elegans, GI17564282, Length=206, Percent_Identity=28.6407766990291, Blast_Score=90, Evalue=2e-18, Organism=Caenorhabditis elegans, GI193203117, Length=204, Percent_Identity=27.9411764705882, Blast_Score=87, Evalue=1e-17, Organism=Caenorhabditis elegans, GI193203115, Length=202, Percent_Identity=28.2178217821782, Blast_Score=86, Evalue=4e-17, Organism=Caenorhabditis elegans, GI17560676, Length=279, Percent_Identity=24.0143369175627, Blast_Score=85, Evalue=7e-17, Organism=Caenorhabditis elegans, GI17561402, Length=287, Percent_Identity=24.390243902439, Blast_Score=74, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17559104, Length=288, Percent_Identity=28.4722222222222, Blast_Score=73, Evalue=2e-13, Organism=Caenorhabditis elegans, GI193204405, Length=210, Percent_Identity=29.5238095238095, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI71994604, Length=276, Percent_Identity=26.0869565217391, Blast_Score=70, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17560220, Length=267, Percent_Identity=29.2134831460674, Blast_Score=70, Evalue=2e-12, Organism=Caenorhabditis elegans, GI71982365, Length=201, Percent_Identity=26.865671641791, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17508895, Length=207, Percent_Identity=25.6038647342995, Blast_Score=68, Evalue=6e-12, Organism=Caenorhabditis elegans, GI17562910, Length=208, Percent_Identity=29.3269230769231, Blast_Score=68, Evalue=8e-12, Organism=Caenorhabditis elegans, GI71997099, Length=211, Percent_Identity=28.436018957346, Blast_Score=67, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17536025, Length=208, Percent_Identity=29.3269230769231, Blast_Score=65, Evalue=8e-11, Organism=Saccharomyces cerevisiae, GI6322861, Length=205, Percent_Identity=30.2439024390244, Blast_Score=79, Evalue=1e-15, Organism=Saccharomyces cerevisiae, GI6323882, Length=216, Percent_Identity=27.7777777777778, Blast_Score=64, Evalue=4e-11, Organism=Drosophila melanogaster, GI24639444, Length=278, Percent_Identity=31.6546762589928, Blast_Score=105, Evalue=4e-23, Organism=Drosophila melanogaster, GI18859837, Length=193, Percent_Identity=31.6062176165803, Blast_Score=96, Evalue=3e-20, Organism=Drosophila melanogaster, GI24640492, Length=208, Percent_Identity=27.8846153846154, Blast_Score=90, Evalue=2e-18, Organism=Drosophila melanogaster, GI281364892, Length=217, Percent_Identity=27.1889400921659, Blast_Score=88, Evalue=1e-17, Organism=Drosophila melanogaster, GI24649181, Length=205, Percent_Identity=29.2682926829268, Blast_Score=84, Evalue=2e-16, Organism=Drosophila melanogaster, GI21355631, Length=183, Percent_Identity=28.9617486338798, Blast_Score=82, Evalue=4e-16, Organism=Drosophila melanogaster, GI24581726, Length=218, Percent_Identity=26.1467889908257, Blast_Score=73, Evalue=3e-13, Organism=Drosophila melanogaster, GI21355319, Length=272, Percent_Identity=26.4705882352941, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI21356301, Length=219, Percent_Identity=27.3972602739726, Blast_Score=72, Evalue=8e-13, Organism=Drosophila melanogaster, GI23397609, Length=289, Percent_Identity=27.681660899654, Blast_Score=71, Evalue=1e-12, Organism=Drosophila melanogaster, GI24648944, Length=227, Percent_Identity=28.6343612334802, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI24584744, Length=215, Percent_Identity=28.3720930232558, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI28574402, Length=215, Percent_Identity=28.3720930232558, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI24643142, Length=203, Percent_Identity=28.5714285714286, Blast_Score=68, Evalue=1e-11, Organism=Drosophila melanogaster, GI21358495, Length=211, Percent_Identity=27.4881516587678, Blast_Score=66, Evalue=4e-11, Organism=Drosophila melanogaster, GI116007236, Length=216, Percent_Identity=26.8518518518519, Blast_Score=65, Evalue=1e-10,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: 1.1.1.100 [C]
Molecular weight: Translated: 36834; Mature: 36703
Theoretical pI: Translated: 6.98; Mature: 6.98
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAYNIFRRGLLKGTAAATAFAVLNQASAQTGANISQDGRSDTGARELHGQSVPEPPPEK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCCC SAGPIRPGRGSALTGKVAVVTGAARGIGRSIAVEMAANGADVVALDIAGPVSTASNAVPA CCCCCCCCCCCCCCCCEEEEECCHHHCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCC TPEDLAETVRQIMAYGRRGESIRADIRDIAALRAAADHVEQTYGKIDIVVADAAIQRWKP CHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHH LLEMEDADWRDVIDNNLNGTANTIRAFAPKMVARKSGRIIVLSSMQGKHGTRDAASYSAS HHCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHCCCC KWGILGLMKSAALELGQHNITVNALIPGLVDTALTRYDTRLSEAIRETGREAPAQPTPQQ HHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH AWDARAPTVALKVGWLQPDDISPAAVFLASVAAAMVTGAEYEVTAGDSAKDV HHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCC >Mature Secondary Structure PAYNIFRRGLLKGTAAATAFAVLNQASAQTGANISQDGRSDTGARELHGQSVPEPPPEK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCCC SAGPIRPGRGSALTGKVAVVTGAARGIGRSIAVEMAANGADVVALDIAGPVSTASNAVPA CCCCCCCCCCCCCCCCEEEEECCHHHCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCC TPEDLAETVRQIMAYGRRGESIRADIRDIAALRAAADHVEQTYGKIDIVVADAAIQRWKP CHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHH LLEMEDADWRDVIDNNLNGTANTIRAFAPKMVARKSGRIIVLSSMQGKHGTRDAASYSAS HHCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHCCCC KWGILGLMKSAALELGQHNITVNALIPGLVDTALTRYDTRLSEAIRETGREAPAQPTPQQ HHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH AWDARAPTVALKVGWLQPDDISPAAVFLASVAAAMVTGAEYEVTAGDSAKDV HHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NADPH [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Oxoacyl-[acyl-carrier-protein]; NADPH; D-3-hydroxy-acyl-ACP; NADP [C]
Specific reaction: Oxoacyl-[acyl-carrier-protein] + NADPH = (3R)-hydroxyacyl-[acyl-carrier-protein] + NADP+ D-3-hydroxy-acyl-ACP + NADP = NADPH + Proton + beta-ketoacyl-ACP [C]
General reaction: Redox reaction [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA