| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146343627
Identifier: 146343627
GI number: 146343627
Start: 7132503
End: 7133585
Strand: Direct
Name: 146343627
Synonym: BRADO6866
Alternate gene names: NA
Gene position: 7132503-7133585 (Clockwise)
Preceding gene: 146343626
Following gene: 146343628
Centisome position: 95.65
GC content: 68.61
Gene sequence:
>1083_bases TTGAGCGCTAGAGCCACATTCACCCGACGCGGGCTGATCGGCTTGCTGGGCCTGCTGGCGCTGCCGCGGCTCGCCCGGGC GCAGGGCTTTGCGGGTCTTGCCGACAGCGGCGACGGCTTCACGCCGGTGACGCCTGGCAAGACCTTCAGCTTCCCGGCCG ACCACGGCCCGCATGACGATTTCCGCATCGAGTGGTGGTACATCACCGCCAATCTAAGCGACGCCAGTGGCAAGGCCTAC GGCCTGCAATGGACGCTGTTCCGCTCGGCAGCCCGGCCCGGGCCACAGGCCGAGGGCTTCGACAATCAGCAGCTGTGGAT GGCCCATGCGGCGGTGACGCGCGCCGACAGTCATCGCTCCACCGAGAAATACGCGCGCGGCGGCATCGGCCAGGCTGGCG TCGAGGCCAAGCCGTTCCAGGCCTGGATCGACGATTGGCAGCTGCGCGGCACCGACGCGACCGACGATCAATCGCTGGCG CCGCTCGACATGAGCGCGAGCGCATCGGACTTCTCCTACGCGCTGCACCTGGAGGCGGATCATCCGGTGGTGCTGCAGGG CATCGGCGGCTACAGCCGCAAATCCGAGCGCGGCCAGGCGTCGTACTACTACAGCCAGCCGTTCTACCGCGCCCGCGGCC GCATCAGCTTCGACGGCACGCCGGTCGAGGTCACCGGCCAGGCGTGGCTCGACCGCGAATGGAGCAGCCAGCCGCTGGCC TCCGACCAGAGCGGCTGGGACTGGTTCGCGCTGCATTTCTCGGGCGGCGAGAAGCTGATGCTCTACCGGATGCGGCAGGG CAATGGGGACTACACGTCCGGTACCTGGATCACGGCCGACGGCGCGTCACGCCCGCTCGGCCCCGACGGCATCGCGATGC GGCCGACCGAGACGGTTGCGATCGGCGAGCGCAAGCTGCCGATCGGCTGGCACGTCGCGATCGCTTCCCTCGGCATCGCC ATCGATACCGCGCCGCTCAATCCGAAGGCCTGGATGGGCACCCGCGTGCCGTATTGGGAGGGGCCGATCAGCTTCAAGGG CAGCCACACCGGGGTGGGCTATCTCGAGCTGACGGGGTATTAA
Upstream 100 bases:
>100_bases CTGTTGATCGTCACGCTCGCCGCCGCGCTGGTCGCCTCGCTGCTGCCCGTGCTCAGGCTGGCGCGGATGCAGCCGGCGCA GCTCGTGAGGACCTTCACCA
Downstream 100 bases:
>100_bases AACGTATCGATCAAGGGGGGACCGCAATGTATCACTTCACGGCCATCGTGACCGTTCTCGCGCTGCTGCTCTACTTCTAC ATGTCGATCCTGGTGGGGAA
Product: putative signal peptide
Products: NA
Alternate protein names: Secreted Hydrolase; Hydrolase; Lipoprotein; ABC Transporter Type C Secreted Protein; Hydroxyneurosporene Synthase; ABC Transporter Lipoprotein; Secreted Hydrolase-Like; Twin-Arginine Translocation Pathway Signal; ABC-Type Transport System Hydrolase Component; Signal Peptide; Attachment Protein; Hydroxymethylglutaryl-Co A Reductase
Number of amino acids: Translated: 360; Mature: 359
Protein sequence:
>360_residues MSARATFTRRGLIGLLGLLALPRLARAQGFAGLADSGDGFTPVTPGKTFSFPADHGPHDDFRIEWWYITANLSDASGKAY GLQWTLFRSAARPGPQAEGFDNQQLWMAHAAVTRADSHRSTEKYARGGIGQAGVEAKPFQAWIDDWQLRGTDATDDQSLA PLDMSASASDFSYALHLEADHPVVLQGIGGYSRKSERGQASYYYSQPFYRARGRISFDGTPVEVTGQAWLDREWSSQPLA SDQSGWDWFALHFSGGEKLMLYRMRQGNGDYTSGTWITADGASRPLGPDGIAMRPTETVAIGERKLPIGWHVAIASLGIA IDTAPLNPKAWMGTRVPYWEGPISFKGSHTGVGYLELTGY
Sequences:
>Translated_360_residues MSARATFTRRGLIGLLGLLALPRLARAQGFAGLADSGDGFTPVTPGKTFSFPADHGPHDDFRIEWWYITANLSDASGKAY GLQWTLFRSAARPGPQAEGFDNQQLWMAHAAVTRADSHRSTEKYARGGIGQAGVEAKPFQAWIDDWQLRGTDATDDQSLA PLDMSASASDFSYALHLEADHPVVLQGIGGYSRKSERGQASYYYSQPFYRARGRISFDGTPVEVTGQAWLDREWSSQPLA SDQSGWDWFALHFSGGEKLMLYRMRQGNGDYTSGTWITADGASRPLGPDGIAMRPTETVAIGERKLPIGWHVAIASLGIA IDTAPLNPKAWMGTRVPYWEGPISFKGSHTGVGYLELTGY >Mature_359_residues SARATFTRRGLIGLLGLLALPRLARAQGFAGLADSGDGFTPVTPGKTFSFPADHGPHDDFRIEWWYITANLSDASGKAYG LQWTLFRSAARPGPQAEGFDNQQLWMAHAAVTRADSHRSTEKYARGGIGQAGVEAKPFQAWIDDWQLRGTDATDDQSLAP LDMSASASDFSYALHLEADHPVVLQGIGGYSRKSERGQASYYYSQPFYRARGRISFDGTPVEVTGQAWLDREWSSQPLAS DQSGWDWFALHFSGGEKLMLYRMRQGNGDYTSGTWITADGASRPLGPDGIAMRPTETVAIGERKLPIGWHVAIASLGIAI DTAPLNPKAWMGTRVPYWEGPISFKGSHTGVGYLELTGY
Specific function: Unknown
COG id: COG5621
COG function: function code R; Predicted secreted hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39329; Mature: 39198
Theoretical pI: Translated: 6.61; Mature: 6.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSARATFTRRGLIGLLGLLALPRLARAQGFAGLADSGDGFTPVTPGKTFSFPADHGPHDD CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCC FRIEWWYITANLSDASGKAYGLQWTLFRSAARPGPQAEGFDNQQLWMAHAAVTRADSHRS EEEEEEEEEEECCCCCCCEEEEEEEEEHHHCCCCCCCCCCCCCEEEEEHHHHHHCCCCCC TEKYARGGIGQAGVEAKPFQAWIDDWQLRGTDATDDQSLAPLDMSASASDFSYALHLEAD HHHHHHCCCCCCCCCCCCHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCC HPVVLQGIGGYSRKSERGQASYYYSQPFYRARGRISFDGTPVEVTGQAWLDREWSSQPLA CCEEEEECCCCCCCCCCCCEEEEECCCHHHHCCEEEECCCCEEEECCCEECCCCCCCCCC SDQSGWDWFALHFSGGEKLMLYRMRQGNGDYTSGTWITADGASRPLGPDGIAMRPTETVA CCCCCCEEEEEEECCCCEEEEEEEECCCCCCCCCCEEEECCCCCCCCCCCEEECCCCEEE IGERKLPIGWHVAIASLGIAIDTAPLNPKAWMGTRVPYWEGPISFKGSHTGVGYLELTGY ECCCCCCCEEEEEEHHCCEEEECCCCCCCHHCCCCCCCCCCCEEECCCCCCEEEEEEECC >Mature Secondary Structure SARATFTRRGLIGLLGLLALPRLARAQGFAGLADSGDGFTPVTPGKTFSFPADHGPHDD CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCC FRIEWWYITANLSDASGKAYGLQWTLFRSAARPGPQAEGFDNQQLWMAHAAVTRADSHRS EEEEEEEEEEECCCCCCCEEEEEEEEEHHHCCCCCCCCCCCCCEEEEEHHHHHHCCCCCC TEKYARGGIGQAGVEAKPFQAWIDDWQLRGTDATDDQSLAPLDMSASASDFSYALHLEAD HHHHHHCCCCCCCCCCCCHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCC HPVVLQGIGGYSRKSERGQASYYYSQPFYRARGRISFDGTPVEVTGQAWLDREWSSQPLA CCEEEEECCCCCCCCCCCCEEEEECCCHHHHCCEEEECCCCEEEECCCEECCCCCCCCCC SDQSGWDWFALHFSGGEKLMLYRMRQGNGDYTSGTWITADGASRPLGPDGIAMRPTETVA CCCCCCEEEEEEECCCCEEEEEEEECCCCCCCCCCEEEECCCCCCCCCCCEEECCCCEEE IGERKLPIGWHVAIASLGIAIDTAPLNPKAWMGTRVPYWEGPISFKGSHTGVGYLELTGY ECCCCCCCEEEEEEHHCCEEEECCCCCCCHHCCCCCCCCCCCEEECCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA