Definition Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession NC_009445
Length 7,456,587

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The map label for this gene is lolC [C]

Identifier: 146343626

GI number: 146343626

Start: 7130051

End: 7132513

Strand: Direct

Name: lolC [C]

Synonym: BRADO6865

Alternate gene names: 146343626

Gene position: 7130051-7132513 (Clockwise)

Preceding gene: 146343625

Following gene: 146343627

Centisome position: 95.62

GC content: 69.96

Gene sequence:

>2463_bases
ATGAGACGCGCGGTGTGGATCCTCGCCGTGCTGCTCAGCCACTGGCGGCGGCATCCGATGCAGCTCGCGACCTTGCTGAT
CGGCCTGATCTCGGCCACCGCGCTGTGGAGCGGCGTGCAGGCGCTGAACCAGCAGGCGCGCAGCTCCTATGATCGCGCCG
CGGCGATCTTCGGCGGCGCGCGCACGCCGATGCTGGTCGCCAAGGACGGCAAGATGCTGCCGCAAAGCGTGTTCGCCGCC
TTGCGCCGCGCCGGCTGGCCGGTGTCGCCGGTCGTCGAGGGTCGCGTGCAGATCGATGGCCGCTCGATCCGGCTGCTCGG
CATCGAGCCGTTCAGCATTCCCAAGGAGGTCGGCGATGCGCCGACGGTCGGCCGCAGCGAGCTCGAGGCGTTCCTGACGC
CGCCGCACCGGACGCTGATCTCGCCGGAGACGCTGGCCGAAATCGGACTCAAGGACGGCGCGACGCCGCGACTCAGCAAC
GACGCGGTGCTGCCGCCGCTGATGGCGCAACAGCAGCTCGCGCCCGGCGTGCTCGTTGTCGACATCAGCGACGCGCAACG
GCTGCTCGACAAGCCCGGCCAGATCTCGCGGCTCTTGCTCGGCAAGACGACCGCGCAGCGCGCGCCGTTGCAGAGTTTTG
CGGACGGCCGCCTGCAGCTGGTGCAGCCGGAGGCCGAGACCGATCTGGAGCGGCTGACCGACAGCTTCCATCTCAACCTC
ACCGCGTTCGGCCTGCTGTCCTTCGTCGTCGGCCTGTTCATCGTCAACTCCGCGATCGGCCTCGCCTTCGAGCAGCGGCT
GCCGGTGCTGCGCACCTTGCGCGCCTGCGGCGTGTCGGCGCGTCAGCTCAACGCCGTGCTGATCGGCGAGCTCATCGCGT
TCGCCCTGGTCGCGGGCATCGTCGGCCTGGTCTGCGGCTATGTCATCGCAGCGACGCTGCTGCCGAACGTCGCCGCGTCC
TTGCGTGGGCTCTACGGCGCGCAGGTGCCGGGCGAGCTGAGCCTGCGGCCGGAATGGTGGCTCGCGGGCCTTGTCATCAG
CGTGGCCGGCGCGCTCGCGGCCGCCACCACCAGCCTGGTCAAATCGATGCGGCTGCCGATCCTCTCGACTGCGCAGCCTT
ACGCGTGGCAGGAGGCGCAGCGGCGCTGGCTGCGGCTGCAGAGCGCGGTCGCGCTCGCCTTCTTCGTCGCCGCCGGGCTG
CTGCTGTGGCTCGGGCAGTCGCTGCTCGCCGGCTTCGGCGTGCTCGCGGCGATGATGCTCGGCGCCGCGCTGCTGCTGCC
CGCGATTCTCGAATTCGTGCTGCGGCTCGGCGAGCACGGCGCGCGGGCGGCGCTGGCGCAATGGTTCTGGGCCGACAGCC
GGCAGCAGATCTCGGGCCTGTCGCTGGCGCTGATGGCGCTGCTGCTGGCGCTCGCCGTCAATGTCGGCGTGGCGACGATG
GTAGAGACGTTCAGCCGCACCTTCCTGGTCTGGCTCGATGGCCGGCTCGCCGCCGACATCTATATCAGTGCGGCCGATGA
AGCGCAGGCGCGCGACATTCAGGGGTGGCTGCGCACGCGGCCCGAGGTGCAAGCGGTGTTGCCGGGCGGCCGCGCCGAAA
CGCAACTGTCGGGCGCGCCGATCGATGTGCTCGGCCTGCCCGATCACGACACGTATCGCGAGCACTGGCCGCTGCTACAG
GCCGGCCCCGATGCGTGGAAGCAGCTGGTGCGAGGCGATGCCGGCTTCGTCAGCGAGCAGCTGGCCCGGCGGCTCAATCT
CTCGCTCGGCGACGCCATCGACATCCCCGCACCGGCCGGCGACTGGCACATCACGGTGGCCGGCATCTACGCCGACTACG
GCAATCCGAAGGGCCAGGTCACCGTGAACGTCGCCGCGCTGACGCGGCGTTTTCCGGCGACGCCGATCACGCGGATGGCG
GTGCGCGCAGCGCCCGCCGACGTGCCCAGACTGATCGCTGATCTCGGCGAGAAGTTCGGCCTCGACGGCCGCAACGTCGT
CGACCAGGCCAACATCAAGCAGGAGTCCAAGCAGATCTTCAACCGCACCTTTGCGGTGACCGGCGCGCTCAACACCTTTA
CGCTCGGTGTCGCCGCGATCGCCCTGCTGACGAGTCTGCTGACCTTGGCGAACTCCCGCCTGCCGCAACTCGCACCTTTA
TGGGCGATCGGCCTCACGCGCCGCCGCCTTGCCGAGGTCGAACTGCTGAAGACGCTGTCGCTGGCCGGCCTCACCGCGCT
GCTGGCGCTGCCGCTCGGGCTGGTCGTGGCTTGGTGCCTGATCGCGATCGTCAACGTCAAGGCGTTCGGCTGGCGGCTGC
CGTTCGACGTGTTTCCGCTGCAGCTGATCCGGCTGTTGATCGTCACGCTCGCCGCCGCGCTGGTCGCCTCGCTGCTGCCC
GTGCTCAGGCTGGCGCGGATGCAGCCGGCGCAGCTCGTGAGGACCTTCACCATTGAGCGCTAG

Upstream 100 bases:

>100_bases
TCGTCGCGCGCACCGGCTGCGGCTTCCTGATGGTGACGCATAGCGCACGGCTCGCGGCGATGCTCGACCGCCACGTCCAT
CTGCATGCGGGCCGCGTCGC

Downstream 100 bases:

>100_bases
AGCCACATTCACCCGACGCGGGCTGATCGGCTTGCTGGGCCTGCTGGCGCTGCCGCGGCTCGCCCGGGCGCAGGGCTTTG
CGGGTCTTGCCGACAGCGGC

Product: ABC transporter permease

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 820; Mature: 820

Protein sequence:

>820_residues
MRRAVWILAVLLSHWRRHPMQLATLLIGLISATALWSGVQALNQQARSSYDRAAAIFGGARTPMLVAKDGKMLPQSVFAA
LRRAGWPVSPVVEGRVQIDGRSIRLLGIEPFSIPKEVGDAPTVGRSELEAFLTPPHRTLISPETLAEIGLKDGATPRLSN
DAVLPPLMAQQQLAPGVLVVDISDAQRLLDKPGQISRLLLGKTTAQRAPLQSFADGRLQLVQPEAETDLERLTDSFHLNL
TAFGLLSFVVGLFIVNSAIGLAFEQRLPVLRTLRACGVSARQLNAVLIGELIAFALVAGIVGLVCGYVIAATLLPNVAAS
LRGLYGAQVPGELSLRPEWWLAGLVISVAGALAAATTSLVKSMRLPILSTAQPYAWQEAQRRWLRLQSAVALAFFVAAGL
LLWLGQSLLAGFGVLAAMMLGAALLLPAILEFVLRLGEHGARAALAQWFWADSRQQISGLSLALMALLLALAVNVGVATM
VETFSRTFLVWLDGRLAADIYISAADEAQARDIQGWLRTRPEVQAVLPGGRAETQLSGAPIDVLGLPDHDTYREHWPLLQ
AGPDAWKQLVRGDAGFVSEQLARRLNLSLGDAIDIPAPAGDWHITVAGIYADYGNPKGQVTVNVAALTRRFPATPITRMA
VRAAPADVPRLIADLGEKFGLDGRNVVDQANIKQESKQIFNRTFAVTGALNTFTLGVAAIALLTSLLTLANSRLPQLAPL
WAIGLTRRRLAEVELLKTLSLAGLTALLALPLGLVVAWCLIAIVNVKAFGWRLPFDVFPLQLIRLLIVTLAAALVASLLP
VLRLARMQPAQLVRTFTIER

Sequences:

>Translated_820_residues
MRRAVWILAVLLSHWRRHPMQLATLLIGLISATALWSGVQALNQQARSSYDRAAAIFGGARTPMLVAKDGKMLPQSVFAA
LRRAGWPVSPVVEGRVQIDGRSIRLLGIEPFSIPKEVGDAPTVGRSELEAFLTPPHRTLISPETLAEIGLKDGATPRLSN
DAVLPPLMAQQQLAPGVLVVDISDAQRLLDKPGQISRLLLGKTTAQRAPLQSFADGRLQLVQPEAETDLERLTDSFHLNL
TAFGLLSFVVGLFIVNSAIGLAFEQRLPVLRTLRACGVSARQLNAVLIGELIAFALVAGIVGLVCGYVIAATLLPNVAAS
LRGLYGAQVPGELSLRPEWWLAGLVISVAGALAAATTSLVKSMRLPILSTAQPYAWQEAQRRWLRLQSAVALAFFVAAGL
LLWLGQSLLAGFGVLAAMMLGAALLLPAILEFVLRLGEHGARAALAQWFWADSRQQISGLSLALMALLLALAVNVGVATM
VETFSRTFLVWLDGRLAADIYISAADEAQARDIQGWLRTRPEVQAVLPGGRAETQLSGAPIDVLGLPDHDTYREHWPLLQ
AGPDAWKQLVRGDAGFVSEQLARRLNLSLGDAIDIPAPAGDWHITVAGIYADYGNPKGQVTVNVAALTRRFPATPITRMA
VRAAPADVPRLIADLGEKFGLDGRNVVDQANIKQESKQIFNRTFAVTGALNTFTLGVAAIALLTSLLTLANSRLPQLAPL
WAIGLTRRRLAEVELLKTLSLAGLTALLALPLGLVVAWCLIAIVNVKAFGWRLPFDVFPLQLIRLLIVTLAAALVASLLP
VLRLARMQPAQLVRTFTIER
>Mature_820_residues
MRRAVWILAVLLSHWRRHPMQLATLLIGLISATALWSGVQALNQQARSSYDRAAAIFGGARTPMLVAKDGKMLPQSVFAA
LRRAGWPVSPVVEGRVQIDGRSIRLLGIEPFSIPKEVGDAPTVGRSELEAFLTPPHRTLISPETLAEIGLKDGATPRLSN
DAVLPPLMAQQQLAPGVLVVDISDAQRLLDKPGQISRLLLGKTTAQRAPLQSFADGRLQLVQPEAETDLERLTDSFHLNL
TAFGLLSFVVGLFIVNSAIGLAFEQRLPVLRTLRACGVSARQLNAVLIGELIAFALVAGIVGLVCGYVIAATLLPNVAAS
LRGLYGAQVPGELSLRPEWWLAGLVISVAGALAAATTSLVKSMRLPILSTAQPYAWQEAQRRWLRLQSAVALAFFVAAGL
LLWLGQSLLAGFGVLAAMMLGAALLLPAILEFVLRLGEHGARAALAQWFWADSRQQISGLSLALMALLLALAVNVGVATM
VETFSRTFLVWLDGRLAADIYISAADEAQARDIQGWLRTRPEVQAVLPGGRAETQLSGAPIDVLGLPDHDTYREHWPLLQ
AGPDAWKQLVRGDAGFVSEQLARRLNLSLGDAIDIPAPAGDWHITVAGIYADYGNPKGQVTVNVAALTRRFPATPITRMA
VRAAPADVPRLIADLGEKFGLDGRNVVDQANIKQESKQIFNRTFAVTGALNTFTLGVAAIALLTSLLTLANSRLPQLAPL
WAIGLTRRRLAEVELLKTLSLAGLTALLALPLGLVVAWCLIAIVNVKAFGWRLPFDVFPLQLIRLLIVTLAAALVASLLP
VLRLARMQPAQLVRTFTIER

Specific function: Part Of An ATP-Dependent Transport System Lolcde Responsible For The Release Of Lipoproteins Targeted To The Outer Membrane From The Inner Membrane. Such A Release Is Dependent Of The Sorting-Signal (Absence Of An Asp At Position 2 Of The Mature Lipoprot

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 88199; Mature: 88199

Theoretical pI: Translated: 10.50; Mature: 10.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRAVWILAVLLSHWRRHPMQLATLLIGLISATALWSGVQALNQQARSSYDRAAAIFGGA
CCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RTPMLVAKDGKMLPQSVFAALRRAGWPVSPVVEGRVQIDGRSIRLLGIEPFSIPKEVGDA
CCCEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCEEEECCCEEEEEECCCCCCHHHCCCC
PTVGRSELEAFLTPPHRTLISPETLAEIGLKDGATPRLSNDAVLPPLMAQQQLAPGVLVV
CCCCHHHHHHHCCCCCHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEE
DISDAQRLLDKPGQISRLLLGKTTAQRAPLQSFADGRLQLVQPEAETDLERLTDSFHLNL
ECHHHHHHHCCCCHHHHHHHHCCHHHHCCHHHHCCCCEEEECCCHHHHHHHHHHHHCCHH
TAFGLLSFVVGLFIVNSAIGLAFEQRLPVLRTLRACGVSARQLNAVLIGELIAFALVAGI
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
VGLVCGYVIAATLLPNVAASLRGLYGAQVPGELSLRPEWWLAGLVISVAGALAAATTSLV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
KSMRLPILSTAQPYAWQEAQRRWLRLQSAVALAFFVAAGLLLWLGQSLLAGFGVLAAMML
HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GAALLLPAILEFVLRLGEHGARAALAQWFWADSRQQISGLSLALMALLLALAVNVGVATM
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VETFSRTFLVWLDGRLAADIYISAADEAQARDIQGWLRTRPEVQAVLPGGRAETQLSGAP
HHHHHCEEEEEECCCEEEEEEEECCCCHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCC
IDVLGLPDHDTYREHWPLLQAGPDAWKQLVRGDAGFVSEQLARRLNLSLGDAIDIPAPAG
EEEEECCCCCCHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCC
DWHITVAGIYADYGNPKGQVTVNVAALTRRFPATPITRMAVRAAPADVPRLIADLGEKFG
CCEEEEEEEEECCCCCCCEEEEEHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHC
LDGRNVVDQANIKQESKQIFNRTFAVTGALNTFTLGVAAIALLTSLLTLANSRLPQLAPL
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
WAIGLTRRRLAEVELLKTLSLAGLTALLALPLGLVVAWCLIAIVNVKAFGWRLPFDVFPL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
QLIRLLIVTLAAALVASLLPVLRLARMQPAQLVRTFTIER
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC
>Mature Secondary Structure
MRRAVWILAVLLSHWRRHPMQLATLLIGLISATALWSGVQALNQQARSSYDRAAAIFGGA
CCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RTPMLVAKDGKMLPQSVFAALRRAGWPVSPVVEGRVQIDGRSIRLLGIEPFSIPKEVGDA
CCCEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCEEEECCCEEEEEECCCCCCHHHCCCC
PTVGRSELEAFLTPPHRTLISPETLAEIGLKDGATPRLSNDAVLPPLMAQQQLAPGVLVV
CCCCHHHHHHHCCCCCHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEE
DISDAQRLLDKPGQISRLLLGKTTAQRAPLQSFADGRLQLVQPEAETDLERLTDSFHLNL
ECHHHHHHHCCCCHHHHHHHHCCHHHHCCHHHHCCCCEEEECCCHHHHHHHHHHHHCCHH
TAFGLLSFVVGLFIVNSAIGLAFEQRLPVLRTLRACGVSARQLNAVLIGELIAFALVAGI
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
VGLVCGYVIAATLLPNVAASLRGLYGAQVPGELSLRPEWWLAGLVISVAGALAAATTSLV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
KSMRLPILSTAQPYAWQEAQRRWLRLQSAVALAFFVAAGLLLWLGQSLLAGFGVLAAMML
HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GAALLLPAILEFVLRLGEHGARAALAQWFWADSRQQISGLSLALMALLLALAVNVGVATM
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VETFSRTFLVWLDGRLAADIYISAADEAQARDIQGWLRTRPEVQAVLPGGRAETQLSGAP
HHHHHCEEEEEECCCEEEEEEEECCCCHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCC
IDVLGLPDHDTYREHWPLLQAGPDAWKQLVRGDAGFVSEQLARRLNLSLGDAIDIPAPAG
EEEEECCCCCCHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCC
DWHITVAGIYADYGNPKGQVTVNVAALTRRFPATPITRMAVRAAPADVPRLIADLGEKFG
CCEEEEEEEEECCCCCCCEEEEEHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHC
LDGRNVVDQANIKQESKQIFNRTFAVTGALNTFTLGVAAIALLTSLLTLANSRLPQLAPL
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
WAIGLTRRRLAEVELLKTLSLAGLTALLALPLGLVVAWCLIAIVNVKAFGWRLPFDVFPL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
QLIRLLIVTLAAALVASLLPVLRLARMQPAQLVRTFTIER
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA