Click here to switch to the map view.

The map label for this gene is yngJ [H]

Identifier: 146343602

GI number: 146343602

Start: 7101406

End: 7102545

Strand: Reverse

Name: yngJ [H]

Synonym: BRADO6840

Alternate gene names: 146343602

Gene position: 7102545-7101406 (Counterclockwise)

Preceding gene: 146343603

Following gene: 146343592

Centisome position: 95.25

GC content: 67.28

Gene sequence:

>1140_bases
ATGCCTCTCCTCCTCACCGAAGAACAATCCATGCTGCGCGATAGCGCGCGCGGTCTGATCTCCGATCACGCGCCGGTGGC
GCATTTGCGCAAGCTACGCGACAGCCGCGACGAGACCGGCTTCTCGCGCGAGCTCTGGGCCACCTTTGCCGAGATGGGCT
TCGCCGGCCTGCTGGTGCCGGAAGAGCACGGCGGCTCCGGTCTCGGCGCGGTCGAAGCCGGCGTGGTGATGGAGGAGATT
GGCCGCACCTTGATGCCGTCGCCGTTCCTCGCGACCTCGGTGCTGTCAGCGTCCGCGCTGACGCGTGCGGGTTCGGCTGC
GCAGAAGTCGGAGTATCTTCCGAGGATCGCCAGCGGCAAGCTGCTTGCGGCTCTCGCCCTCGATGAAGGCGCCAAGCATC
GCCCGCTGCATACTTCGCTCCACGCCAAGCGCGCCGGCAACGGCTTCAAGCTCGACGGCGTTAAATCGATGGTGGTCGAC
GGTCACGTCGCCGATCTCCTGCTCGTCGTCGCGCGCAGCGCCGGCGAGCCGGGCGAGCGCGAGGGCCTGACGCTGTTCCT
GGTCGATCCCAAAGCCAAGGGGATCAATATCGAGCGCACCATCATGGTCGATGCGCATAATGCCGCGCGGATCACCTTCG
ACAATGTCGAGGTCACGGCCGATCATGTGCTCGGCGAGGTCGATGGCGGCGCGGCGGTGCTCGGCGGCGTGCTTGATCTG
GGCCGCGGCGCCGTTGCCTCCGAGATGGTGGGCCTGAGCGAGGAGGTGTTCGGCCGCACGGTGGCGTATCTCAAGGAGCG
CAAGCAGTTCGGCAAGGCGATCGGCGAATTCCAGGCGCTGCAGCACCGCGCCGCGCAGCTCTACATCGAAATCGAGATCA
CCCGCGCCGCGGTGCTGAAATCGCTGCAGGCGCTCGATGCCGATCCCGCAGGTGCGACGGCTTCCGTCGCCGTTGCCAAG
GCCCGCGCCGGCGCCACCGCGACGCGCGCCGTGCAGGAGGGCGTGCAGATGCATGGCGGCATGGGCATGACCGATCAGTT
CGACATCGGCTTCTTCATGAAGCGGGCCCGGGTGTGCGAGGAGCTGCTGGGCGATGCGAACTATCACGCGGCGCAGCTGG
CGCAGCTGAGGGGATACTGA

Upstream 100 bases:

>100_bases
TCCATCCGCACGAGGAGAGACGTGGATGGCCGGGTCAAGCCCGGCCATGACGAGCTGAACGAGCTTCGCTCCCAAACAAC
ATCGACACTGGACAGCCGCC

Downstream 100 bases:

>100_bases
GCCAATCCCGTTATTGCACTCGCTCCGGCTCCACTCTCCACTGTCATCGTCCGCGAAGGCGGACGATCCAGTACGCCGAG
AAAGTCGTGATAGGCCGAGG

Product: putative acyl-CoA dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 379; Mature: 378

Protein sequence:

>379_residues
MPLLLTEEQSMLRDSARGLISDHAPVAHLRKLRDSRDETGFSRELWATFAEMGFAGLLVPEEHGGSGLGAVEAGVVMEEI
GRTLMPSPFLATSVLSASALTRAGSAAQKSEYLPRIASGKLLAALALDEGAKHRPLHTSLHAKRAGNGFKLDGVKSMVVD
GHVADLLLVVARSAGEPGEREGLTLFLVDPKAKGINIERTIMVDAHNAARITFDNVEVTADHVLGEVDGGAAVLGGVLDL
GRGAVASEMVGLSEEVFGRTVAYLKERKQFGKAIGEFQALQHRAAQLYIEIEITRAAVLKSLQALDADPAGATASVAVAK
ARAGATATRAVQEGVQMHGGMGMTDQFDIGFFMKRARVCEELLGDANYHAAQLAQLRGY

Sequences:

>Translated_379_residues
MPLLLTEEQSMLRDSARGLISDHAPVAHLRKLRDSRDETGFSRELWATFAEMGFAGLLVPEEHGGSGLGAVEAGVVMEEI
GRTLMPSPFLATSVLSASALTRAGSAAQKSEYLPRIASGKLLAALALDEGAKHRPLHTSLHAKRAGNGFKLDGVKSMVVD
GHVADLLLVVARSAGEPGEREGLTLFLVDPKAKGINIERTIMVDAHNAARITFDNVEVTADHVLGEVDGGAAVLGGVLDL
GRGAVASEMVGLSEEVFGRTVAYLKERKQFGKAIGEFQALQHRAAQLYIEIEITRAAVLKSLQALDADPAGATASVAVAK
ARAGATATRAVQEGVQMHGGMGMTDQFDIGFFMKRARVCEELLGDANYHAAQLAQLRGY
>Mature_378_residues
PLLLTEEQSMLRDSARGLISDHAPVAHLRKLRDSRDETGFSRELWATFAEMGFAGLLVPEEHGGSGLGAVEAGVVMEEIG
RTLMPSPFLATSVLSASALTRAGSAAQKSEYLPRIASGKLLAALALDEGAKHRPLHTSLHAKRAGNGFKLDGVKSMVVDG
HVADLLLVVARSAGEPGEREGLTLFLVDPKAKGINIERTIMVDAHNAARITFDNVEVTADHVLGEVDGGAAVLGGVLDLG
RGAVASEMVGLSEEVFGRTVAYLKERKQFGKAIGEFQALQHRAAQLYIEIEITRAAVLKSLQALDADPAGATASVAVAKA
RAGATATRAVQEGVQMHGGMGMTDQFDIGFFMKRARVCEELLGDANYHAAQLAQLRGY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI226958412, Length=365, Percent_Identity=32.6027397260274, Blast_Score=173, Evalue=2e-43,
Organism=Homo sapiens, GI226958414, Length=326, Percent_Identity=32.5153374233129, Blast_Score=162, Evalue=4e-40,
Organism=Homo sapiens, GI4501857, Length=370, Percent_Identity=28.9189189189189, Blast_Score=140, Evalue=3e-33,
Organism=Homo sapiens, GI4501859, Length=377, Percent_Identity=26.2599469496021, Blast_Score=133, Evalue=2e-31,
Organism=Homo sapiens, GI76496475, Length=313, Percent_Identity=28.1150159744409, Blast_Score=117, Evalue=2e-26,
Organism=Homo sapiens, GI4557235, Length=313, Percent_Identity=28.1150159744409, Blast_Score=117, Evalue=2e-26,
Organism=Homo sapiens, GI187960098, Length=368, Percent_Identity=27.7173913043478, Blast_Score=116, Evalue=4e-26,
Organism=Homo sapiens, GI4557231, Length=368, Percent_Identity=27.7173913043478, Blast_Score=116, Evalue=4e-26,
Organism=Homo sapiens, GI21361497, Length=348, Percent_Identity=25.5747126436782, Blast_Score=107, Evalue=2e-23,
Organism=Homo sapiens, GI7669494, Length=359, Percent_Identity=28.4122562674095, Blast_Score=104, Evalue=1e-22,
Organism=Homo sapiens, GI4503943, Length=359, Percent_Identity=28.4122562674095, Blast_Score=104, Evalue=1e-22,
Organism=Homo sapiens, GI4557233, Length=323, Percent_Identity=26.3157894736842, Blast_Score=102, Evalue=6e-22,
Organism=Homo sapiens, GI7656849, Length=316, Percent_Identity=24.0506329113924, Blast_Score=93, Evalue=3e-19,
Organism=Homo sapiens, GI48976061, Length=336, Percent_Identity=25.297619047619, Blast_Score=76, Evalue=5e-14,
Organism=Homo sapiens, GI211971008, Length=336, Percent_Identity=25.297619047619, Blast_Score=76, Evalue=6e-14,
Organism=Escherichia coli, GI87081958, Length=371, Percent_Identity=29.1105121293801, Blast_Score=125, Evalue=4e-30,
Organism=Escherichia coli, GI1786223, Length=365, Percent_Identity=26.8493150684932, Blast_Score=104, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI17506239, Length=383, Percent_Identity=29.7650130548303, Blast_Score=154, Evalue=8e-38,
Organism=Caenorhabditis elegans, GI17508101, Length=382, Percent_Identity=28.5340314136126, Blast_Score=146, Evalue=2e-35,
Organism=Caenorhabditis elegans, GI17538396, Length=370, Percent_Identity=27.5675675675676, Blast_Score=135, Evalue=4e-32,
Organism=Caenorhabditis elegans, GI17569725, Length=363, Percent_Identity=27.5482093663912, Blast_Score=121, Evalue=7e-28,
Organism=Caenorhabditis elegans, GI32563615, Length=234, Percent_Identity=31.1965811965812, Blast_Score=120, Evalue=1e-27,
Organism=Caenorhabditis elegans, GI71990804, Length=259, Percent_Identity=30.8880308880309, Blast_Score=119, Evalue=2e-27,
Organism=Caenorhabditis elegans, GI17534899, Length=332, Percent_Identity=27.1084337349398, Blast_Score=118, Evalue=5e-27,
Organism=Caenorhabditis elegans, GI71985184, Length=357, Percent_Identity=26.0504201680672, Blast_Score=110, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI17533517, Length=321, Percent_Identity=24.9221183800623, Blast_Score=107, Evalue=8e-24,
Organism=Caenorhabditis elegans, GI17534353, Length=378, Percent_Identity=25.3968253968254, Blast_Score=97, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI71985192, Length=312, Percent_Identity=26.2820512820513, Blast_Score=97, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI17570075, Length=368, Percent_Identity=25.8152173913043, Blast_Score=95, Evalue=5e-20,
Organism=Caenorhabditis elegans, GI71982178, Length=256, Percent_Identity=28.515625, Blast_Score=92, Evalue=5e-19,
Organism=Caenorhabditis elegans, GI17551932, Length=332, Percent_Identity=23.1927710843373, Blast_Score=77, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17505929, Length=344, Percent_Identity=24.4186046511628, Blast_Score=75, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI17562446, Length=312, Percent_Identity=25.3205128205128, Blast_Score=72, Evalue=4e-13,
Organism=Drosophila melanogaster, GI24666513, Length=385, Percent_Identity=30.3896103896104, Blast_Score=148, Evalue=5e-36,
Organism=Drosophila melanogaster, GI21355753, Length=366, Percent_Identity=28.4153005464481, Blast_Score=141, Evalue=6e-34,
Organism=Drosophila melanogaster, GI24646207, Length=362, Percent_Identity=26.5193370165746, Blast_Score=108, Evalue=7e-24,
Organism=Drosophila melanogaster, GI21356377, Length=368, Percent_Identity=25.5434782608696, Blast_Score=107, Evalue=2e-23,
Organism=Drosophila melanogaster, GI281363737, Length=362, Percent_Identity=25.9668508287293, Blast_Score=104, Evalue=9e-23,
Organism=Drosophila melanogaster, GI24660351, Length=366, Percent_Identity=27.5956284153005, Blast_Score=103, Evalue=2e-22,
Organism=Drosophila melanogaster, GI19920834, Length=305, Percent_Identity=28.1967213114754, Blast_Score=84, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 40127; Mature: 39996

Theoretical pI: Translated: 6.38; Mature: 6.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLLLTEEQSMLRDSARGLISDHAPVAHLRKLRDSRDETGFSRELWATFAEMGFAGLLVP
CCEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEE
EEHGGSGLGAVEAGVVMEEIGRTLMPSPFLATSVLSASALTRAGSAAQKSEYLPRIASGK
CCCCCCCCCHHHHHHHHHHHCHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCC
LLAALALDEGAKHRPLHTSLHAKRAGNGFKLDGVKSMVVDGHVADLLLVVARSAGEPGER
EEEEEECCCCCCCCCCHHHHHHHHCCCCCEECCHHHHHHCCHHHHHHHHHHHCCCCCCCC
EGLTLFLVDPKAKGINIERTIMVDAHNAARITFDNVEVTADHVLGEVDGGAAVLGGVLDL
CCEEEEEECCCCCCCCEEEEEEEECCCCEEEEECCEEEEHHHHHHCCCCCHHHHHHHHHH
GRGAVASEMVGLSEEVFGRTVAYLKERKQFGKAIGEFQALQHRAAQLYIEIEITRAAVLK
CCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEHHHHHHH
SLQALDADPAGATASVAVAKARAGATATRAVQEGVQMHGGMGMTDQFDIGFFMKRARVCE
HHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
ELLGDANYHAAQLAQLRGY
HHHCCCCCHHHHHHHHCCC
>Mature Secondary Structure 
PLLLTEEQSMLRDSARGLISDHAPVAHLRKLRDSRDETGFSRELWATFAEMGFAGLLVP
CEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEE
EEHGGSGLGAVEAGVVMEEIGRTLMPSPFLATSVLSASALTRAGSAAQKSEYLPRIASGK
CCCCCCCCCHHHHHHHHHHHCHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCC
LLAALALDEGAKHRPLHTSLHAKRAGNGFKLDGVKSMVVDGHVADLLLVVARSAGEPGER
EEEEEECCCCCCCCCCHHHHHHHHCCCCCEECCHHHHHHCCHHHHHHHHHHHCCCCCCCC
EGLTLFLVDPKAKGINIERTIMVDAHNAARITFDNVEVTADHVLGEVDGGAAVLGGVLDL
CCEEEEEECCCCCCCCEEEEEEEECCCCEEEEECCEEEEHHHHHHCCCCCHHHHHHHHHH
GRGAVASEMVGLSEEVFGRTVAYLKERKQFGKAIGEFQALQHRAAQLYIEIEITRAAVLK
CCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEHHHHHHH
SLQALDADPAGATASVAVAKARAGATATRAVQEGVQMHGGMGMTDQFDIGFFMKRARVCE
HHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
ELLGDANYHAAQLAQLRGY
HHHCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387222; 9384377 [H]