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The map label for this gene is aapJ [H]

Identifier: 146343600

GI number: 146343600

Start: 7098544

End: 7099581

Strand: Direct

Name: aapJ [H]

Synonym: BRADO6838

Alternate gene names: 146343600

Gene position: 7098544-7099581 (Clockwise)

Preceding gene: 146343599

Following gene: 146343601

Centisome position: 95.2

GC content: 64.45

Gene sequence:

>1038_bases
ATGCGCACTTTCCGAGGCGGCCTGCTGATCGGGCTTGCCGTTGCCGTGCTCGTCGCGGCGCTCGCCGTCACCTATGAAAT
GTACGACACCCGCACCCTGAAGCGCACTGTCCGCCGCGGCGAGGTGCTGTGCGGCGTCAATGCCGGCCTGCCCGGCTTCT
CGATCCCCGACGACAAGGGCAACTGGACCGGCTTCGACGTCGATTTCTGCCGCGCCGTGGCGGCCGCGATCTTCGACGAC
CCGAAGAAGGCGCGGTTCGTGCCGCTCGACGCCAGCGAGCGCTTCAAGGAGCTGCAGAGCCGCAAGGTCGACATCCTCTC
GCGCAACACCACCTGGTCGATGGCGCGCGAGCAGAACTACGACCTGTATTTCCCGGCGGTCGCCTATTACGACGGCCAGG
GCTTCATGGTGCCGCGGGCGCGCAAGCTGGAGACCGCGCTCGACCTCAACGGCAGCAAGGTCTGCGTGCAGGATTCGACG
ACCAACGCGCTCAACCTCGGCGACTACTTCCGTGCCAACAACATGAAGTACGAGGAAGTCAAGCTCCCGAAGCTGGACGA
CGTTCTCAAGGCCTATGACAGCGGCAAGTGCGATACCTTCACCGCCGACGTCTCGCAGCTTTACGCGCTGCGCCTGGTGC
TGACCAAGCCGGGCGATCACGACATCCTGCCCGATCTGATCTCCAAGGAGCCGCTCGCTCCCGTCGTGCGCCAGCGCGAC
GACGACTGGATGATGATCGTGAAGTGGACGCTGTATGCGATGATCAATGCCGAGGAGCTCGGTGTCACCTCCAAGAACAT
CGACGAGGCGCTGAAGTCGAAGAAGCCGGACGTGATGCGGCTGGTCGGCAACGAGGGCACCTACGGCCAGGACCTCGGCC
TGTCGAAGGACTGGGCCGCGCGCATCATCCGCCACGTCGGCAATTACGGCGAGGTCTACGAGCGCAACGTCGGCAGCGAG
TCCAAGCTGAAGATCCCGCGCGGCATGAACCAGTTGTGGAACGCGGGCGGCATTCAGTACGCGCCGCCGATCAGGTAG

Upstream 100 bases:

>100_bases
CAAGGTCGTGGTGCGGCAGAAGCCGGAACTGTGACGGCGGCCTCAGCCGCCGGACATTCAGCCATCGCTTTGTCCTGACA
TTTTCCGAAAGAGATTCATC

Downstream 100 bases:

>100_bases
GGTTTTCGTCATACCCTCGCCATCATCGCGAGGAGCTTCGCGACGAAGCGGTCCAGGGTTGTCACAGCGACTCTGGATTG
CTTCGCTTCGCCGCTTCGCT

Product: general L-amino acid-binding periplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 345; Mature: 345

Protein sequence:

>345_residues
MRTFRGGLLIGLAVAVLVAALAVTYEMYDTRTLKRTVRRGEVLCGVNAGLPGFSIPDDKGNWTGFDVDFCRAVAAAIFDD
PKKARFVPLDASERFKELQSRKVDILSRNTTWSMAREQNYDLYFPAVAYYDGQGFMVPRARKLETALDLNGSKVCVQDST
TNALNLGDYFRANNMKYEEVKLPKLDDVLKAYDSGKCDTFTADVSQLYALRLVLTKPGDHDILPDLISKEPLAPVVRQRD
DDWMMIVKWTLYAMINAEELGVTSKNIDEALKSKKPDVMRLVGNEGTYGQDLGLSKDWAARIIRHVGNYGEVYERNVGSE
SKLKIPRGMNQLWNAGGIQYAPPIR

Sequences:

>Translated_345_residues
MRTFRGGLLIGLAVAVLVAALAVTYEMYDTRTLKRTVRRGEVLCGVNAGLPGFSIPDDKGNWTGFDVDFCRAVAAAIFDD
PKKARFVPLDASERFKELQSRKVDILSRNTTWSMAREQNYDLYFPAVAYYDGQGFMVPRARKLETALDLNGSKVCVQDST
TNALNLGDYFRANNMKYEEVKLPKLDDVLKAYDSGKCDTFTADVSQLYALRLVLTKPGDHDILPDLISKEPLAPVVRQRD
DDWMMIVKWTLYAMINAEELGVTSKNIDEALKSKKPDVMRLVGNEGTYGQDLGLSKDWAARIIRHVGNYGEVYERNVGSE
SKLKIPRGMNQLWNAGGIQYAPPIR
>Mature_345_residues
MRTFRGGLLIGLAVAVLVAALAVTYEMYDTRTLKRTVRRGEVLCGVNAGLPGFSIPDDKGNWTGFDVDFCRAVAAAIFDD
PKKARFVPLDASERFKELQSRKVDILSRNTTWSMAREQNYDLYFPAVAYYDGQGFMVPRARKLETALDLNGSKVCVQDST
TNALNLGDYFRANNMKYEEVKLPKLDDVLKAYDSGKCDTFTADVSQLYALRLVLTKPGDHDILPDLISKEPLAPVVRQRD
DDWMMIVKWTLYAMINAEELGVTSKNIDEALKSKKPDVMRLVGNEGTYGQDLGLSKDWAARIIRHVGNYGEVYERNVGSE
SKLKIPRGMNQLWNAGGIQYAPPIR

Specific function: Part of a binding-protein-dependent transport system for L-amino acids, affects the uptake as well as efflux of these amino acids [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 3 family [H]

Homologues:

Organism=Escherichia coli, GI1788228, Length=260, Percent_Identity=24.2307692307692, Blast_Score=63, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005768
- InterPro:   IPR001638
- InterPro:   IPR018313 [H]

Pfam domain/function: PF00497 SBP_bac_3 [H]

EC number: NA

Molecular weight: Translated: 38698; Mature: 38698

Theoretical pI: Translated: 8.25; Mature: 8.25

Prosite motif: PS01039 SBP_BACTERIAL_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTFRGGLLIGLAVAVLVAALAVTYEMYDTRTLKRTVRRGEVLCGVNAGLPGFSIPDDKG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCC
NWTGFDVDFCRAVAAAIFDDPKKARFVPLDASERFKELQSRKVDILSRNTTWSMAREQNY
CCCCCCHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHCCEEEEECCCEEHHHHCCCC
DLYFPAVAYYDGQGFMVPRARKLETALDLNGSKVCVQDSTTNALNLGDYFRANNMKYEEV
CEEECEEEEECCCEEECCCHHHHHHHHCCCCCEEEEECCCCCEEECCHHHHCCCCCHHHC
KLPKLDDVLKAYDSGKCDTFTADVSQLYALRLVLTKPGDHDILPDLISKEPLAPVVRQRD
CCCCHHHHHHHHCCCCCCEEHHHHHHHHHEEEEEECCCCCCCCHHHHCCCCCCHHHHCCC
DDWMMIVKWTLYAMINAEELGVTSKNIDEALKSKKPDVMRLVGNEGTYGQDLGLSKDWAA
CCEEEEEEEHHHHHCCHHHHCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHH
RIIRHVGNYGEVYERNVGSESKLKIPRGMNQLWNAGGIQYAPPIR
HHHHHHCCHHHHHHHCCCCCCCEECCCCHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MRTFRGGLLIGLAVAVLVAALAVTYEMYDTRTLKRTVRRGEVLCGVNAGLPGFSIPDDKG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCC
NWTGFDVDFCRAVAAAIFDDPKKARFVPLDASERFKELQSRKVDILSRNTTWSMAREQNY
CCCCCCHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHCCEEEEECCCEEHHHHCCCC
DLYFPAVAYYDGQGFMVPRARKLETALDLNGSKVCVQDSTTNALNLGDYFRANNMKYEEV
CEEECEEEEECCCEEECCCHHHHHHHHCCCCCEEEEECCCCCEEECCHHHHCCCCCHHHC
KLPKLDDVLKAYDSGKCDTFTADVSQLYALRLVLTKPGDHDILPDLISKEPLAPVVRQRD
CCCCHHHHHHHHCCCCCCEEHHHHHHHHHEEEEEECCCCCCCCHHHHCCCCCCHHHHCCC
DDWMMIVKWTLYAMINAEELGVTSKNIDEALKSKKPDVMRLVGNEGTYGQDLGLSKDWAA
CCEEEEEEEHHHHHCCHHHHCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHH
RIIRHVGNYGEVYERNVGSESKLKIPRGMNQLWNAGGIQYAPPIR
HHHHHHCCHHHHHHHCCCCCCCEECCCCHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8898392 [H]