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The map label for this gene is erfK [H]

Identifier: 146343599

GI number: 146343599

Start: 7097884

End: 7098477

Strand: Direct

Name: erfK [H]

Synonym: BRADO6837

Alternate gene names: 146343599

Gene position: 7097884-7098477 (Clockwise)

Preceding gene: 146343598

Following gene: 146343600

Centisome position: 95.19

GC content: 67.0

Gene sequence:

>594_bases
ATGCCGAGTTTCCATCGCCTGCTGTGTGCAGCCAGCGCCATCATCGCGCTGGCGCTGTCCACATCGCACGGCTTCGCCCA
GTCCGAGGATCCTGGTGACCAACCCGGTCTCGTCGCCGATGACGGCTACGAGCTCGATCCGGAATGGCGCAAGCAGGTGG
TCTATTTCCGCACCACCGAGCCGCCGGGCACGATCATCGTCTCCACCGCCGAGCGCTATCTCTATCTGGTGCAGCCGGGC
GGCCGCGCCATCCGCTACGGCATCGGCGTGGGCCGCGACGGCTTCCAGTGGCAGGGGCTGCTGCAGATCACCAAGAAGGC
CGAGTGGCCGGACTGGACGCCGCCGCCGGAGATGATCCAGCGCCAGCCTTATCTGCCGCGCTTCATGGCCGGCGGTCCCG
GCAATCCCCTGGGCGCGCGCGCGATGTATCTGGGCACCACCGTGTACCGCATCCACGGCACCAACCAGCCCTGGACCATC
GGCACCAAGATTTCCTCCGGCTGCTTCCGCCTGGTGAATGCTGATGTCGCCGACCTGTTCGACCGCGTGCCCGTCGGCAC
CAAGGTCGTGGTGCGGCAGAAGCCGGAACTGTGA

Upstream 100 bases:

>100_bases
ACCCGCGCTCAGCTTGACTTTGCGGCCAAGATGCCCCTGAAATTTGGCGGGTGGTTTTGATCGGGCAAGCTTCGCAGGGG
TCCGTTGAGGAGAGCTTTGA

Downstream 100 bases:

>100_bases
CGGCGGCCTCAGCCGCCGGACATTCAGCCATCGCTTTGTCCTGACATTTTCCGAAAGAGATTCATCATGCGCACTTTCCG
AGGCGGCCTGCTGATCGGGC

Product: putative ErfK/YbiS/YcfS/YnhG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 196

Protein sequence:

>197_residues
MPSFHRLLCAASAIIALALSTSHGFAQSEDPGDQPGLVADDGYELDPEWRKQVVYFRTTEPPGTIIVSTAERYLYLVQPG
GRAIRYGIGVGRDGFQWQGLLQITKKAEWPDWTPPPEMIQRQPYLPRFMAGGPGNPLGARAMYLGTTVYRIHGTNQPWTI
GTKISSGCFRLVNADVADLFDRVPVGTKVVVRQKPEL

Sequences:

>Translated_197_residues
MPSFHRLLCAASAIIALALSTSHGFAQSEDPGDQPGLVADDGYELDPEWRKQVVYFRTTEPPGTIIVSTAERYLYLVQPG
GRAIRYGIGVGRDGFQWQGLLQITKKAEWPDWTPPPEMIQRQPYLPRFMAGGPGNPLGARAMYLGTTVYRIHGTNQPWTI
GTKISSGCFRLVNADVADLFDRVPVGTKVVVRQKPEL
>Mature_196_residues
PSFHRLLCAASAIIALALSTSHGFAQSEDPGDQPGLVADDGYELDPEWRKQVVYFRTTEPPGTIIVSTAERYLYLVQPGG
RAIRYGIGVGRDGFQWQGLLQITKKAEWPDWTPPPEMIQRQPYLPRFMAGGPGNPLGARAMYLGTTVYRIHGTNQPWTIG
TKISSGCFRLVNADVADLFDRVPVGTKVVVRQKPEL

Specific function: Responsible, at least in part, for anchoring of the major outer membrane lipoprotein (Lpp, also known as the Braun lipoprotein) to the peptidoglycan via a meso-diaminopimelyl-L-Lys- bond on the terminal residue of Lpp [H]

COG id: COG1376

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YkuD family [H]

Homologues:

Organism=Escherichia coli, GI1788299, Length=140, Percent_Identity=40.7142857142857, Blast_Score=98, Evalue=3e-22,
Organism=Escherichia coli, GI1787040, Length=141, Percent_Identity=37.5886524822695, Blast_Score=84, Evalue=6e-18,
Organism=Escherichia coli, GI1787968, Length=139, Percent_Identity=38.1294964028777, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI1787356, Length=141, Percent_Identity=34.7517730496454, Blast_Score=75, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005490 [H]

Pfam domain/function: PF03734 YkuD [H]

EC number: NA

Molecular weight: Translated: 21785; Mature: 21654

Theoretical pI: Translated: 8.65; Mature: 8.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSFHRLLCAASAIIALALSTSHGFAQSEDPGDQPGLVADDGYELDPEWRKQVVYFRTTE
CCHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCEEECCCCCCCHHHCCEEEEEEECC
PPGTIIVSTAERYLYLVQPGGRAIRYGIGVGRDGFQWQGLLQITKKAEWPDWTPPPEMIQ
CCCEEEEEECCEEEEEECCCCCEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHC
RQPYLPRFMAGGPGNPLGARAMYLGTTVYRIHGTNQPWTIGTKISSGCFRLVNADVADLF
CCCCCCHHHCCCCCCCCCCEEEEECEEEEEEECCCCCEEEECCCCCCCCEECCCCHHHHH
DRVPVGTKVVVRQKPEL
HHCCCCCEEEEECCCCC
>Mature Secondary Structure 
PSFHRLLCAASAIIALALSTSHGFAQSEDPGDQPGLVADDGYELDPEWRKQVVYFRTTE
CHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCEEECCCCCCCHHHCCEEEEEEECC
PPGTIIVSTAERYLYLVQPGGRAIRYGIGVGRDGFQWQGLLQITKKAEWPDWTPPPEMIQ
CCCEEEEEECCEEEEEECCCCCEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHC
RQPYLPRFMAGGPGNPLGARAMYLGTTVYRIHGTNQPWTIGTKISSGCFRLVNADVADLF
CCCCCCHHHCCCCCCCCCCEEEEECEEEEEEECCCCCEEEECCCCCCCCEECCCCHHHHH
DRVPVGTKVVVRQKPEL
HHCCCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7592411; 9097040; 9278503; 9298646 [H]