| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is aroK [H]
Identifier: 146343555
GI number: 146343555
Start: 7052462
End: 7053385
Strand: Direct
Name: aroK [H]
Synonym: BRADO6792
Alternate gene names: 146343555
Gene position: 7052462-7053385 (Clockwise)
Preceding gene: 146343550
Following gene: 146343562
Centisome position: 94.58
GC content: 68.51
Gene sequence:
>924_bases ATGGCGCTCAACAGCGACGCTGCCAGGGATGATTCCGGCCAGTCGGCGGCCGAGACCGATTTCCTCGACCAGCTGGGGCA GCGGGTGCGGCGGATGCGCGGCCTCGCCGGCATGTCACGCAAGGTGCTGGCCGAGGTCTCCGGGATTTCCGAGCGCTACA TCGCCCAGCTCGAAAGCGGCAAAGGTAATGTCTCGATCGTGCTGCTGCGCCGCATCGCCAACGCCATCAACGCGCCGCTC GACGACATCATTCCCGGCGGCGAGCCTTCGCCGGACTGGCCGGTCATCCGCGATCTCCTGAAGAAGGCGAGCCCGAGCCA GATCGCCCAGGTCAGGGAGCTGCTCGCCGGCGGTGCCTCGGCGCCGCTACGACGCACCTTCTCGGGCATCGCGCTGATCG GCCTGCGCGGCGCCGGCAAGTCGACTCTCGGCAGAATGCTCGCCGAGCGGATCGGCTGGAGCTTTGTCGAGCTCAACAAG GAGATCGAGCGGCAGAACGGCCTGTCGGCTGCCGAAATCATCGCGCTCTACGGCCAGGAAGGCTTCCGCCGCATGGAGCA GACGGCGCTGGTCCAGCTATTGGCGCGCAAGGAGCCGATAGTGCTGGCGACCGGCGGCGGCATCGTCTCCGAGCCCGTCA CCTTCGACCTGATCCTGACCTCGTTCTACACGATCTGGCTCAAGGCCGAGCCGGAGGAGCACATGGCGCGCGTACGCAAG CAGGGCGATCTGCGGCCGATGGCCGACGACCGCTCGGCGATGGCCGAGCTGCGCAACATCCTGGCGAGCCGCGAGCCGCT GTATGCGCGGGCGAATGCGGTGGTGGATACGGCAGGGCTGACGGTCGATGCGGCGGCGGCGCGGCTCGGCGACGCGGTGA AGCCGGTGATCGCCAGCGAGGCGCGGATGTTCGCGCGGGGATGA
Upstream 100 bases:
>100_bases CCCCCGATTTTTGAATTATAATTCATAGAAGGCCACCAACGGCGCTTGCTGTCAATCCTCTCCGGCATTATGTTTCCGCT TCAAAAGAAGTCAGAGGGAC
Downstream 100 bases:
>100_bases GGCAAAAGCCGCCGAGAGCTCCCCAGTCGACGCTTTGCGGGATCTTAAGCAGCGGGCCGGCGCGCTGCAGGTTAGTCCCT CGAGACCTCGCACTCATCGG
Product: anaerobic benzoate catabolism transcriptional regulator
Products: NA
Alternate protein names: SK [H]
Number of amino acids: Translated: 307; Mature: 306
Protein sequence:
>307_residues MALNSDAARDDSGQSAAETDFLDQLGQRVRRMRGLAGMSRKVLAEVSGISERYIAQLESGKGNVSIVLLRRIANAINAPL DDIIPGGEPSPDWPVIRDLLKKASPSQIAQVRELLAGGASAPLRRTFSGIALIGLRGAGKSTLGRMLAERIGWSFVELNK EIERQNGLSAAEIIALYGQEGFRRMEQTALVQLLARKEPIVLATGGGIVSEPVTFDLILTSFYTIWLKAEPEEHMARVRK QGDLRPMADDRSAMAELRNILASREPLYARANAVVDTAGLTVDAAAARLGDAVKPVIASEARMFARG
Sequences:
>Translated_307_residues MALNSDAARDDSGQSAAETDFLDQLGQRVRRMRGLAGMSRKVLAEVSGISERYIAQLESGKGNVSIVLLRRIANAINAPL DDIIPGGEPSPDWPVIRDLLKKASPSQIAQVRELLAGGASAPLRRTFSGIALIGLRGAGKSTLGRMLAERIGWSFVELNK EIERQNGLSAAEIIALYGQEGFRRMEQTALVQLLARKEPIVLATGGGIVSEPVTFDLILTSFYTIWLKAEPEEHMARVRK QGDLRPMADDRSAMAELRNILASREPLYARANAVVDTAGLTVDAAAARLGDAVKPVIASEARMFARG >Mature_306_residues ALNSDAARDDSGQSAAETDFLDQLGQRVRRMRGLAGMSRKVLAEVSGISERYIAQLESGKGNVSIVLLRRIANAINAPLD DIIPGGEPSPDWPVIRDLLKKASPSQIAQVRELLAGGASAPLRRTFSGIALIGLRGAGKSTLGRMLAERIGWSFVELNKE IERQNGLSAAEIIALYGQEGFRRMEQTALVQLLARKEPIVLATGGGIVSEPVTFDLILTSFYTIWLKAEPEEHMARVRKQ GDLRPMADDRSAMAELRNILASREPLYARANAVVDTAGLTVDAAAARLGDAVKPVIASEARMFARG
Specific function: Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate [H]
COG id: COG0703
COG function: function code E; Shikimate kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the shikimate kinase family [H]
Homologues:
Organism=Escherichia coli, GI87082255, Length=172, Percent_Identity=31.9767441860465, Blast_Score=79, Evalue=5e-16, Organism=Escherichia coli, GI1786587, Length=148, Percent_Identity=30.4054054054054, Blast_Score=62, Evalue=6e-11,
Paralogues:
None
Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000623 - InterPro: IPR023000 [H]
Pfam domain/function: PF01202 SKI [H]
EC number: =2.7.1.71 [H]
Molecular weight: Translated: 33128; Mature: 32996
Theoretical pI: Translated: 9.74; Mature: 9.74
Prosite motif: PS50943 HTH_CROC1 ; PS01128 SHIKIMATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALNSDAARDDSGQSAAETDFLDQLGQRVRRMRGLAGMSRKVLAEVSGISERYIAQLESG CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCC KGNVSIVLLRRIANAINAPLDDIIPGGEPSPDWPVIRDLLKKASPSQIAQVRELLAGGAS CCCEEHHHHHHHHHHHCCCHHHCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCC APLRRTFSGIALIGLRGAGKSTLGRMLAERIGWSFVELNKEIERQNGLSAAEIIALYGQE CCHHHHHCCEEEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHH GFRRMEQTALVQLLARKEPIVLATGGGIVSEPVTFDLILTSFYTIWLKAEPEEHMARVRK HHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHEECCCHHHHHHHHH QGDLRPMADDRSAMAELRNILASREPLYARANAVVDTAGLTVDAAAARLGDAVKPVIASE CCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH ARMFARG HHHHHCC >Mature Secondary Structure ALNSDAARDDSGQSAAETDFLDQLGQRVRRMRGLAGMSRKVLAEVSGISERYIAQLESG CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCC KGNVSIVLLRRIANAINAPLDDIIPGGEPSPDWPVIRDLLKKASPSQIAQVRELLAGGAS CCCEEHHHHHHHHHHHCCCHHHCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCC APLRRTFSGIALIGLRGAGKSTLGRMLAERIGWSFVELNKEIERQNGLSAAEIIALYGQE CCHHHHHCCEEEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHH GFRRMEQTALVQLLARKEPIVLATGGGIVSEPVTFDLILTSFYTIWLKAEPEEHMARVRK HHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHEECCCHHHHHHHHH QGDLRPMADDRSAMAELRNILASREPLYARANAVVDTAGLTVDAAAARLGDAVKPVIASE CCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH ARMFARG HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA