| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is rhlG [H]
Identifier: 146343550
GI number: 146343550
Start: 7045522
End: 7046331
Strand: Direct
Name: rhlG [H]
Synonym: BRADO6787
Alternate gene names: 146343550
Gene position: 7045522-7046331 (Clockwise)
Preceding gene: 146343549
Following gene: 146343555
Centisome position: 94.49
GC content: 67.78
Gene sequence:
>810_bases ATGCTCAAGAATTTGTTCTCGCTCGACGGGCGCGTCGCGCTCGTGACCGGCGGCTCGCGCGGCATCGGCAAGATGATCGC GTCCGGTCTGCTCGCGCATGGCGCGGCGCGGGTCTACATCACCGCGCGCAAGGCCGGACCGTGCGAGGAGACCGCCAAGG CCTTGACGGCCGAGTATGGCGGCGAATGCATCGCGCTGCCGATCGACATCTCGACCATGGCCGGCATCGACCTGCTCGCG GCCGAGATCAAGACGCGTGAGCCGAAGCTCGACATCCTCGTCAACAATGCGGGCGCTGCCTGGGGCGCCGAGTTCGACGA GTTTCCGGAGAGCGGCTGGGACAAGGTGATGAACCTCAACGTCAAGACGCCGTTCTTCCTGACCAAGGCGCTGGCGGCGC CGCTGCGCGCGGCTGCGAGCGCCGAGCGGCCGTCCAAGGTGATCAACATCGCCTCGATCGACGGCATCTTCGTCAACCCG CTGGAGACCTATTCCTACGCCGCGAGCAAGTCCGGCCTGATCCATCTGACGCGGCGCATGGCGGCGAAGCTGATCAAGGA CCACATCGTCGTGACGGCGATCGCGCCGGGGCCGTTCAAGTCCGACATGAACAAGGCGGCCCGCGACCACGCCGACGAGG TCGCGACGCGCGTGCCCGCGGGCCGCATCGGCACCGACGAGGACATGGCGGGCACCGCGATCTTCCTGGCGTCGCGCGCA GGCGACTACGTGGTGGGCAACACGATCGCGGTCGACGGCGGGATCGTCTACGCGAACCCGGGCATTCCGGGCGCGGGCTG GGATAGTTGA
Upstream 100 bases:
>100_bases CCGCTGCAGTTGAACCGCGCCGCATTCATGCGGCTGCGTCTCACTTGACAGCGCCGGCGCCTCCCGCTCACAAGCGCCAT CGACAACAACGGGAGGCATC
Downstream 100 bases:
>100_bases GGGCTGCACTGGAGCCACATCAACGGTGTCGTCCCGGCGAACGCCGGGACCCATAGCCACCGATGCTGGTTGTCAGGCAC GGCGGCGGCCACTTTGCTCT
Product: putative short-chain dehydrogenase/reductase (SDR)
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]
Number of amino acids: Translated: 269; Mature: 269
Protein sequence:
>269_residues MLKNLFSLDGRVALVTGGSRGIGKMIASGLLAHGAARVYITARKAGPCEETAKALTAEYGGECIALPIDISTMAGIDLLA AEIKTREPKLDILVNNAGAAWGAEFDEFPESGWDKVMNLNVKTPFFLTKALAAPLRAAASAERPSKVINIASIDGIFVNP LETYSYAASKSGLIHLTRRMAAKLIKDHIVVTAIAPGPFKSDMNKAARDHADEVATRVPAGRIGTDEDMAGTAIFLASRA GDYVVGNTIAVDGGIVYANPGIPGAGWDS
Sequences:
>Translated_269_residues MLKNLFSLDGRVALVTGGSRGIGKMIASGLLAHGAARVYITARKAGPCEETAKALTAEYGGECIALPIDISTMAGIDLLA AEIKTREPKLDILVNNAGAAWGAEFDEFPESGWDKVMNLNVKTPFFLTKALAAPLRAAASAERPSKVINIASIDGIFVNP LETYSYAASKSGLIHLTRRMAAKLIKDHIVVTAIAPGPFKSDMNKAARDHADEVATRVPAGRIGTDEDMAGTAIFLASRA GDYVVGNTIAVDGGIVYANPGIPGAGWDS >Mature_269_residues MLKNLFSLDGRVALVTGGSRGIGKMIASGLLAHGAARVYITARKAGPCEETAKALTAEYGGECIALPIDISTMAGIDLLA AEIKTREPKLDILVNNAGAAWGAEFDEFPESGWDKVMNLNVKTPFFLTKALAAPLRAAASAERPSKVINIASIDGIFVNP LETYSYAASKSGLIHLTRRMAAKLIKDHIVVTAIAPGPFKSDMNKAARDHADEVATRVPAGRIGTDEDMAGTAIFLASRA GDYVVGNTIAVDGGIVYANPGIPGAGWDS
Specific function: Required for the synthesis of the beta-hydroxy acid moiety of rhamnolipids [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI15277342, Length=258, Percent_Identity=31.3953488372093, Blast_Score=92, Evalue=6e-19, Organism=Homo sapiens, GI19923817, Length=257, Percent_Identity=27.6264591439689, Blast_Score=89, Evalue=4e-18, Organism=Homo sapiens, GI40254992, Length=245, Percent_Identity=27.7551020408163, Blast_Score=88, Evalue=8e-18, Organism=Homo sapiens, GI32483357, Length=253, Percent_Identity=29.6442687747036, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI66933014, Length=194, Percent_Identity=28.3505154639175, Blast_Score=84, Evalue=1e-16, Organism=Homo sapiens, GI5031737, Length=254, Percent_Identity=32.2834645669291, Blast_Score=82, Evalue=4e-16, Organism=Homo sapiens, GI109715829, Length=242, Percent_Identity=29.3388429752066, Blast_Score=79, Evalue=6e-15, Organism=Homo sapiens, GI10190704, Length=264, Percent_Identity=25.7575757575758, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI146231950, Length=211, Percent_Identity=31.7535545023697, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI4503301, Length=256, Percent_Identity=26.5625, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI10190746, Length=223, Percent_Identity=27.3542600896861, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI20149619, Length=202, Percent_Identity=29.2079207920792, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI33667109, Length=204, Percent_Identity=31.3725490196078, Blast_Score=65, Evalue=4e-11, Organism=Homo sapiens, GI126723750, Length=255, Percent_Identity=25.4901960784314, Blast_Score=65, Evalue=7e-11, Organism=Escherichia coli, GI1789208, Length=257, Percent_Identity=40.4669260700389, Blast_Score=149, Evalue=2e-37, Organism=Escherichia coli, GI1790717, Length=265, Percent_Identity=36.6037735849057, Blast_Score=140, Evalue=9e-35, Organism=Escherichia coli, GI1787335, Length=251, Percent_Identity=33.4661354581673, Blast_Score=124, Evalue=5e-30, Organism=Escherichia coli, GI87082160, Length=256, Percent_Identity=30.46875, Blast_Score=108, Evalue=5e-25, Organism=Escherichia coli, GI1788459, Length=256, Percent_Identity=30.078125, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI87082100, Length=257, Percent_Identity=28.4046692607004, Blast_Score=92, Evalue=4e-20, Organism=Escherichia coli, GI1787905, Length=251, Percent_Identity=32.2709163346614, Blast_Score=86, Evalue=4e-18, Organism=Escherichia coli, GI2367175, Length=246, Percent_Identity=28.4552845528455, Blast_Score=85, Evalue=6e-18, Organism=Escherichia coli, GI2367365, Length=247, Percent_Identity=27.1255060728745, Blast_Score=75, Evalue=6e-15, Organism=Escherichia coli, GI1789378, Length=257, Percent_Identity=27.6264591439689, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI1786812, Length=258, Percent_Identity=24.031007751938, Blast_Score=65, Evalue=7e-12, Organism=Caenorhabditis elegans, GI17555706, Length=249, Percent_Identity=33.7349397590361, Blast_Score=117, Evalue=4e-27, Organism=Caenorhabditis elegans, GI25147288, Length=249, Percent_Identity=34.136546184739, Blast_Score=108, Evalue=2e-24, Organism=Caenorhabditis elegans, GI17562906, Length=268, Percent_Identity=32.8358208955224, Blast_Score=104, Evalue=5e-23, Organism=Caenorhabditis elegans, GI17559104, Length=265, Percent_Identity=34.7169811320755, Blast_Score=101, Evalue=4e-22, Organism=Caenorhabditis elegans, GI17561402, Length=263, Percent_Identity=31.9391634980989, Blast_Score=97, Evalue=6e-21, Organism=Caenorhabditis elegans, GI17562908, Length=271, Percent_Identity=32.1033210332103, Blast_Score=97, Evalue=1e-20, Organism=Caenorhabditis elegans, GI17531453, Length=266, Percent_Identity=33.0827067669173, Blast_Score=96, Evalue=1e-20, Organism=Caenorhabditis elegans, GI17562910, Length=263, Percent_Identity=31.1787072243346, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17551412, Length=263, Percent_Identity=30.7984790874525, Blast_Score=94, Evalue=5e-20, Organism=Caenorhabditis elegans, GI17560676, Length=264, Percent_Identity=31.0606060606061, Blast_Score=92, Evalue=3e-19, Organism=Caenorhabditis elegans, GI17538486, Length=266, Percent_Identity=31.203007518797, Blast_Score=91, Evalue=5e-19, Organism=Caenorhabditis elegans, GI17565030, Length=261, Percent_Identity=31.4176245210728, Blast_Score=88, Evalue=5e-18, Organism=Caenorhabditis elegans, GI17538480, Length=266, Percent_Identity=27.4436090225564, Blast_Score=87, Evalue=7e-18, Organism=Caenorhabditis elegans, GI17560332, Length=262, Percent_Identity=31.2977099236641, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI193204405, Length=267, Percent_Identity=30.7116104868914, Blast_Score=86, Evalue=3e-17, Organism=Caenorhabditis elegans, GI17536651, Length=263, Percent_Identity=28.1368821292776, Blast_Score=84, Evalue=5e-17, Organism=Caenorhabditis elegans, GI71997099, Length=232, Percent_Identity=31.8965517241379, Blast_Score=82, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17561272, Length=265, Percent_Identity=30.188679245283, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17536025, Length=267, Percent_Identity=29.2134831460674, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17544670, Length=272, Percent_Identity=27.9411764705882, Blast_Score=82, Evalue=4e-16, Organism=Caenorhabditis elegans, GI17560220, Length=271, Percent_Identity=29.520295202952, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI72000259, Length=270, Percent_Identity=30, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17562904, Length=268, Percent_Identity=29.4776119402985, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17560150, Length=266, Percent_Identity=28.9473684210526, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI115534694, Length=250, Percent_Identity=28, Blast_Score=78, Evalue=6e-15, Organism=Caenorhabditis elegans, GI17562990, Length=263, Percent_Identity=28.8973384030418, Blast_Score=77, Evalue=8e-15, Organism=Caenorhabditis elegans, GI17555612, Length=216, Percent_Identity=31.4814814814815, Blast_Score=75, Evalue=4e-14, Organism=Caenorhabditis elegans, GI17563726, Length=270, Percent_Identity=27.7777777777778, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI71994600, Length=253, Percent_Identity=26.4822134387352, Blast_Score=72, Evalue=4e-13, Organism=Caenorhabditis elegans, GI71994604, Length=252, Percent_Identity=25.7936507936508, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI86565303, Length=218, Percent_Identity=27.0642201834862, Blast_Score=66, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6323882, Length=247, Percent_Identity=26.3157894736842, Blast_Score=65, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6322227, Length=208, Percent_Identity=27.4038461538462, Blast_Score=64, Evalue=2e-11, Organism=Drosophila melanogaster, GI21355319, Length=259, Percent_Identity=34.3629343629344, Blast_Score=104, Evalue=7e-23, Organism=Drosophila melanogaster, GI24639444, Length=250, Percent_Identity=32.8, Blast_Score=104, Evalue=7e-23, Organism=Drosophila melanogaster, GI21357041, Length=255, Percent_Identity=26.2745098039216, Blast_Score=82, Evalue=3e-16, Organism=Drosophila melanogaster, GI28571526, Length=259, Percent_Identity=27.7992277992278, Blast_Score=79, Evalue=3e-15, Organism=Drosophila melanogaster, GI23397609, Length=258, Percent_Identity=27.906976744186, Blast_Score=78, Evalue=6e-15, Organism=Drosophila melanogaster, GI24644339, Length=258, Percent_Identity=27.1317829457364, Blast_Score=78, Evalue=8e-15, Organism=Drosophila melanogaster, GI24647946, Length=243, Percent_Identity=27.9835390946502, Blast_Score=75, Evalue=4e-14, Organism=Drosophila melanogaster, GI45553409, Length=243, Percent_Identity=27.9835390946502, Blast_Score=75, Evalue=4e-14, Organism=Drosophila melanogaster, GI24647948, Length=243, Percent_Identity=27.9835390946502, Blast_Score=75, Evalue=4e-14, Organism=Drosophila melanogaster, GI24643142, Length=250, Percent_Identity=28, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI28573296, Length=206, Percent_Identity=30.5825242718447, Blast_Score=72, Evalue=5e-13, Organism=Drosophila melanogaster, GI24644337, Length=187, Percent_Identity=29.9465240641711, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI24656154, Length=215, Percent_Identity=29.3023255813954, Blast_Score=69, Evalue=5e-12, Organism=Drosophila melanogaster, GI19922628, Length=215, Percent_Identity=29.3023255813954, Blast_Score=69, Evalue=5e-12, Organism=Drosophila melanogaster, GI19921754, Length=208, Percent_Identity=26.4423076923077, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI161076371, Length=200, Percent_Identity=30.5, Blast_Score=66, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 28139; Mature: 28139
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKNLFSLDGRVALVTGGSRGIGKMIASGLLAHGAARVYITARKAGPCEETAKALTAEYG CCCCHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHC GECIALPIDISTMAGIDLLAAEIKTREPKLDILVNNAGAAWGAEFDEFPESGWDKVMNLN CCEEEEEECHHHHHCHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHCCCCCCHHEEECC VKTPFFLTKALAAPLRAAASAERPSKVINIASIDGIFVNPLETYSYAASKSGLIHLTRRM CCCHHHHHHHHHHHHHHHHCCCCCHHEEEEEEECCEEECCHHHHHHHCCCCCHHHHHHHH AAKLIKDHIVVTAIAPGPFKSDMNKAARDHADEVATRVPAGRIGTDEDMAGTAIFLASRA HHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECC GDYVVGNTIAVDGGIVYANPGIPGAGWDS CCEEECCEEEECCCEEEECCCCCCCCCCC >Mature Secondary Structure MLKNLFSLDGRVALVTGGSRGIGKMIASGLLAHGAARVYITARKAGPCEETAKALTAEYG CCCCHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHC GECIALPIDISTMAGIDLLAAEIKTREPKLDILVNNAGAAWGAEFDEFPESGWDKVMNLN CCEEEEEECHHHHHCHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHCCCCCCHHEEECC VKTPFFLTKALAAPLRAAASAERPSKVINIASIDGIFVNPLETYSYAASKSGLIHLTRRM CCCHHHHHHHHHHHHHHHHCCCCCHHEEEEEEECCEEECCHHHHHHHCCCCCHHHHHHHH AAKLIKDHIVVTAIAPGPFKSDMNKAARDHADEVATRVPAGRIGTDEDMAGTAIFLASRA HHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECC GDYVVGNTIAVDGGIVYANPGIPGAGWDS CCEEECCEEEECCCEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9721281; 10984043 [H]