Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is 146343450
Identifier: 146343450
GI number: 146343450
Start: 6941466
End: 6943463
Strand: Reverse
Name: 146343450
Synonym: BRADO6679
Alternate gene names: NA
Gene position: 6943463-6941466 (Counterclockwise)
Preceding gene: 146343451
Following gene: 146343447
Centisome position: 93.12
GC content: 66.82
Gene sequence:
>1998_bases GTGGCGGCTTGCGGCGATGAGGTCAGCTATACGCCAGTGCCGGCGTGGTTCGATCTTGCCCCCTACCAGACGGAGCCATC GGTCGATCAGGACGCGTTCATTGCGAACGGAGTTTGCCGGCTGCTCACGGAGGTGCAGGTCAATCTCACCGGTCCTAAAC CCTGCTGGACCTATCGGGGCGCGCAGCGGATCCTGACCAAGGAGGGCGCCGAGCGGGCGTCGCACATCGTCGTCGACTTC GATCCAGGCTACCAGCGGCTCGACGTGCACACCGTGCGCATTCTGCGCGGCGATCAGTGCATCGATCATGCACGGCCCGG TTGTTTCCAGGTGTTCCGTCGCGAGCGCGACATCGAGCGGCTGATGTTGAACGGCCGTCTGTCGGCATCCTTCCTGGTCC CGGACGTCAGGGCGAACGACATCATCGAGTTCAGTTGCACGCTTTACGGCGACACACCAGTCTTCCAGGGCAAGTACGAG TCCCTGGTGGAGCTCGATACCGCCAATCCGAGCTTCGATTTTCGCCATCGCCTGCTGAAACCGCGCAATCGGGTGATCGC CAGCAGAGAGTTCAACGACGCGCCGCCGGCAACGACCAGCGTCAGCGGCGACATCGAAGATGTGCGCCGGCGCGTTCGGG CCCAGCCAAAACGCAGCCCGAGCCCACCCATGACGCCGCCGTGGGTGGTCCAGGGCCCTGCCTTTCAGCTCAGCCAGTTC ACTGGTTGGGGCGATGTCGCGGCGCTGATGGCGGCGGCCTATGACAGCGCCGAGATGCCGTCGACGCTGGCGGAGGAGAT CGACCGGATCGGCGCGGCCCATCCCGAACCTGCGCAGCGCGCGGCCGAATGGCTGCGGTTCGTGCAGCGTGAATTGCGCT ACTTCCTGCTCGCGCTCGGCGAGGGCGGCCTCGTTCCCCGCGACCTCGATGCGATCTGGGCCGGCCGGTTCGGCGACTGC AAGGACAAGGCGCGGCTCTATGTGGCCGGCGCGCGCCGTCTCGGTCTCGACGCCTGCGCGGCGCTGGTCTCCACGACGCG CGGCCCGATGCTCGACAGGCTGTTGCCGAGCCCGGCCATGTTCGATCACTGCATCGTTCGTGTCCGTATCGACAGTAAGA GCTACTGGCTCGATCCGACGCTGCCGCGGCAGGGCGGCAGCCTTGCCGCGATCGAGCTGCCTCATCTCGGCTGGGCGCTG CCGCTCTCGTCAGATGTCGCGCAGCTGGAGAAGCTGCCCGAGCAGACCGTCGCGCCCGTCGCGCACTGGCACGACGAATG GCGGATCGGCCCGACCCGGCAGGCCCCCGCGACCTTGCATCGCCGCGCCGAGTTCTCCGCCTGGGGCGCCGACCATGTCA GGACGGTGATCGCCAATGAGGGCGAGGCTGGCTACGCCCGCGCCCTGCTTGCGCAAATGCGCTCCGTCTGGCCAGAAGTT GTCGAAGCGAAGCCGATGGTCGTCCATGACGATGAGCAGCAGAACAAGCTCAGCCTGGACACGTCCTACACGATCAGCGA CGGCTGGCGGCCGTCCGATCGGCCCGGCCGCATTCAATGGCAGTTCGAGCGATCGTTCGGCACGGAGTTGGCCTTTGCCG GCCGCGCGACGCGCGAGCACGACATCTTCGTCGGCCGGCCGCGGCGCCTATCCTGGCGCGTGCATGTCGAGATGCCGCGG GCCTGGCCGCGAACCAACACCGACGAATCCTGTGAGCTGCCCGGCATCAAGCTGACGAGCCGCCACGGCACGGCGGACCG GCACATCGACAGCTTCGTCGAGCTGACCGTCGGAGCATGGACCGTGCCGGCGGTGGAGGCCGAGCGCTATGAGCAGCTCG TCAGGCGCATGCAGCGGGATGTCCTGTTCATCCTGGCCGATGACGGGCCAACGACGATTCGCCCCGCCGGCGCTCGCAAG CGTCTTATGATTGAGGTCTTCGCGCGAGTTGTCATGGTGCTGATCTGGATCGCCTGGGCCCTCTGGATGTGGCGATAG
Upstream 100 bases:
>100_bases CCTTCGCTTGAACGCTTTCGCGATCGATTGTAGCTCAAACAGGTGACGTCTGGGGACATGTGTCGTGAATGATATCGGGG AGGGCGGTCGCGGCGGAGCC
Downstream 100 bases:
>100_bases GTCAGTCCGGCGGAGTGATCCACACGACGAACAGGCGGGTTCGGCCTCGCCGAACCCGTCCTGCACGGTTGGCGCGCTCG ATGCGCCTCAGCGCCTCGCG
Product: putative transglutaminase-like enzyme cysteine protease
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 665; Mature: 664
Protein sequence:
>665_residues MAACGDEVSYTPVPAWFDLAPYQTEPSVDQDAFIANGVCRLLTEVQVNLTGPKPCWTYRGAQRILTKEGAERASHIVVDF DPGYQRLDVHTVRILRGDQCIDHARPGCFQVFRRERDIERLMLNGRLSASFLVPDVRANDIIEFSCTLYGDTPVFQGKYE SLVELDTANPSFDFRHRLLKPRNRVIASREFNDAPPATTSVSGDIEDVRRRVRAQPKRSPSPPMTPPWVVQGPAFQLSQF TGWGDVAALMAAAYDSAEMPSTLAEEIDRIGAAHPEPAQRAAEWLRFVQRELRYFLLALGEGGLVPRDLDAIWAGRFGDC KDKARLYVAGARRLGLDACAALVSTTRGPMLDRLLPSPAMFDHCIVRVRIDSKSYWLDPTLPRQGGSLAAIELPHLGWAL PLSSDVAQLEKLPEQTVAPVAHWHDEWRIGPTRQAPATLHRRAEFSAWGADHVRTVIANEGEAGYARALLAQMRSVWPEV VEAKPMVVHDDEQQNKLSLDTSYTISDGWRPSDRPGRIQWQFERSFGTELAFAGRATREHDIFVGRPRRLSWRVHVEMPR AWPRTNTDESCELPGIKLTSRHGTADRHIDSFVELTVGAWTVPAVEAERYEQLVRRMQRDVLFILADDGPTTIRPAGARK RLMIEVFARVVMVLIWIAWALWMWR
Sequences:
>Translated_665_residues MAACGDEVSYTPVPAWFDLAPYQTEPSVDQDAFIANGVCRLLTEVQVNLTGPKPCWTYRGAQRILTKEGAERASHIVVDF DPGYQRLDVHTVRILRGDQCIDHARPGCFQVFRRERDIERLMLNGRLSASFLVPDVRANDIIEFSCTLYGDTPVFQGKYE SLVELDTANPSFDFRHRLLKPRNRVIASREFNDAPPATTSVSGDIEDVRRRVRAQPKRSPSPPMTPPWVVQGPAFQLSQF TGWGDVAALMAAAYDSAEMPSTLAEEIDRIGAAHPEPAQRAAEWLRFVQRELRYFLLALGEGGLVPRDLDAIWAGRFGDC KDKARLYVAGARRLGLDACAALVSTTRGPMLDRLLPSPAMFDHCIVRVRIDSKSYWLDPTLPRQGGSLAAIELPHLGWAL PLSSDVAQLEKLPEQTVAPVAHWHDEWRIGPTRQAPATLHRRAEFSAWGADHVRTVIANEGEAGYARALLAQMRSVWPEV VEAKPMVVHDDEQQNKLSLDTSYTISDGWRPSDRPGRIQWQFERSFGTELAFAGRATREHDIFVGRPRRLSWRVHVEMPR AWPRTNTDESCELPGIKLTSRHGTADRHIDSFVELTVGAWTVPAVEAERYEQLVRRMQRDVLFILADDGPTTIRPAGARK RLMIEVFARVVMVLIWIAWALWMWR >Mature_664_residues AACGDEVSYTPVPAWFDLAPYQTEPSVDQDAFIANGVCRLLTEVQVNLTGPKPCWTYRGAQRILTKEGAERASHIVVDFD PGYQRLDVHTVRILRGDQCIDHARPGCFQVFRRERDIERLMLNGRLSASFLVPDVRANDIIEFSCTLYGDTPVFQGKYES LVELDTANPSFDFRHRLLKPRNRVIASREFNDAPPATTSVSGDIEDVRRRVRAQPKRSPSPPMTPPWVVQGPAFQLSQFT GWGDVAALMAAAYDSAEMPSTLAEEIDRIGAAHPEPAQRAAEWLRFVQRELRYFLLALGEGGLVPRDLDAIWAGRFGDCK DKARLYVAGARRLGLDACAALVSTTRGPMLDRLLPSPAMFDHCIVRVRIDSKSYWLDPTLPRQGGSLAAIELPHLGWALP LSSDVAQLEKLPEQTVAPVAHWHDEWRIGPTRQAPATLHRRAEFSAWGADHVRTVIANEGEAGYARALLAQMRSVWPEVV EAKPMVVHDDEQQNKLSLDTSYTISDGWRPSDRPGRIQWQFERSFGTELAFAGRATREHDIFVGRPRRLSWRVHVEMPRA WPRTNTDESCELPGIKLTSRHGTADRHIDSFVELTVGAWTVPAVEAERYEQLVRRMQRDVLFILADDGPTTIRPAGARKR LMIEVFARVVMVLIWIAWALWMWR
Specific function: Unknown
COG id: COG1305
COG function: function code E; Transglutaminase-like enzymes, putative cysteine proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 75059; Mature: 74928
Theoretical pI: Translated: 7.08; Mature: 7.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAACGDEVSYTPVPAWFDLAPYQTEPSVDQDAFIANGVCRLLTEVQVNLTGPKPCWTYRG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEECCCCCCCCHHH AQRILTKEGAERASHIVVDFDPGYQRLDVHTVRILRGDQCIDHARPGCFQVFRRERDIER HHHHHHHHHHHHHCEEEEEECCCCCEEEEEEEEEECCCHHHHHCCCHHHHHHHHHHHHHH LMLNGRLSASFLVPDVRANDIIEFSCTLYGDTPVFQGKYESLVELDTANPSFDFRHRLLK HHHCCCCCEEEECCCCCCCCEEEEEEEEECCCCCCCCCHHHHEEECCCCCCHHHHHHHHC PRNRVIASREFNDAPPATTSVSGDIEDVRRRVRAQPKRSPSPPMTPPWVVQGPAFQLSQF CHHHEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEECCCHHHHHC TGWGDVAALMAAAYDSAEMPSTLAEEIDRIGAAHPEPAQRAAEWLRFVQRELRYFLLALG CCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC EGGLVPRDLDAIWAGRFGDCKDKARLYVAGARRLGLDACAALVSTTRGPMLDRLLPSPAM CCCCCCCCHHHHHCCCCCCCCCCCEEEEECCHHHCHHHHHHHHHCCCCCHHHHHCCCCCC FDHCIVRVRIDSKSYWLDPTLPRQGGSLAAIELPHLGWALPLSSDVAQLEKLPEQTVAPV CCEEEEEEEECCCCEECCCCCCCCCCCEEEEECCCCCEECCCCHHHHHHHHCCHHHHHHH AHWHDEWRIGPTRQAPATLHRRAEFSAWGADHVRTVIANEGEAGYARALLAQMRSVWPEV HHCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHEEEECCCCHHHHHHHHHHHHHHHHHH VEAKPMVVHDDEQQNKLSLDTSYTISDGWRPSDRPGRIQWQFERSFGTELAFAGRATREH HCCCCEEEECCCCCCEEECCCEEEECCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCCC DIFVGRPRRLSWRVHVEMPRAWPRTNTDESCELPGIKLTSRHGTADRHIDSFVELTVGAW CEEECCCCEEEEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCE TVPAVEAERYEQLVRRMQRDVLFILADDGPTTIRPAGARKRLMIEVFARVVMVLIWIAWA ECCCCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH LWMWR HHHCC >Mature Secondary Structure AACGDEVSYTPVPAWFDLAPYQTEPSVDQDAFIANGVCRLLTEVQVNLTGPKPCWTYRG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEECCCCCCCCHHH AQRILTKEGAERASHIVVDFDPGYQRLDVHTVRILRGDQCIDHARPGCFQVFRRERDIER HHHHHHHHHHHHHCEEEEEECCCCCEEEEEEEEEECCCHHHHHCCCHHHHHHHHHHHHHH LMLNGRLSASFLVPDVRANDIIEFSCTLYGDTPVFQGKYESLVELDTANPSFDFRHRLLK HHHCCCCCEEEECCCCCCCCEEEEEEEEECCCCCCCCCHHHHEEECCCCCCHHHHHHHHC PRNRVIASREFNDAPPATTSVSGDIEDVRRRVRAQPKRSPSPPMTPPWVVQGPAFQLSQF CHHHEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEECCCHHHHHC TGWGDVAALMAAAYDSAEMPSTLAEEIDRIGAAHPEPAQRAAEWLRFVQRELRYFLLALG CCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC EGGLVPRDLDAIWAGRFGDCKDKARLYVAGARRLGLDACAALVSTTRGPMLDRLLPSPAM CCCCCCCCHHHHHCCCCCCCCCCCEEEEECCHHHCHHHHHHHHHCCCCCHHHHHCCCCCC FDHCIVRVRIDSKSYWLDPTLPRQGGSLAAIELPHLGWALPLSSDVAQLEKLPEQTVAPV CCEEEEEEEECCCCEECCCCCCCCCCCEEEEECCCCCEECCCCHHHHHHHHCCHHHHHHH AHWHDEWRIGPTRQAPATLHRRAEFSAWGADHVRTVIANEGEAGYARALLAQMRSVWPEV HHCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHEEEECCCCHHHHHHHHHHHHHHHHHH VEAKPMVVHDDEQQNKLSLDTSYTISDGWRPSDRPGRIQWQFERSFGTELAFAGRATREH HCCCCEEEECCCCCCEEECCCEEEECCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCCC DIFVGRPRRLSWRVHVEMPRAWPRTNTDESCELPGIKLTSRHGTADRHIDSFVELTVGAW CEEECCCCEEEEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCE TVPAVEAERYEQLVRRMQRDVLFILADDGPTTIRPAGARKRLMIEVFARVVMVLIWIAWA ECCCCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH LWMWR HHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA