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The map label for this gene is ompW [C]

Identifier: 146343363

GI number: 146343363

Start: 6840465

End: 6841196

Strand: Reverse

Name: ompW [C]

Synonym: BRADO6590

Alternate gene names: 146343363

Gene position: 6841196-6840465 (Counterclockwise)

Preceding gene: 146343364

Following gene: 146343361

Centisome position: 91.75

GC content: 63.8

Gene sequence:

>732_bases
ATGAATAGAACCTTCCAACTCTCGTCGTCGCTGCTGGTGCTGGCGGCGATCTGCGGCGCCATGGGCTCTGCGCAAGCGGC
CGACCTGGAGGCGGCGCCAGTCATCACCAAGGCTCCGGTGATCGAGGCATGGAATCCCTGGATGATCCGCGTCCGCGCGC
TCGGCGTGCTGCCGGATGCCGGCGGGTCGACCCTCAACGTGACCGGCGTGCCGGCGCTGTCGTCGCCGAACTCGAGCCTG
AAAATCTCCAATCAGGTCGTTCCCGAGCTCGACATCAGCTACTTCTTCACCAGGAACATCGCGGCCGAGCTGATCCTCGG
CGTCACCAGGCATTCGATCAGCGGCACCGGCGCGCTTGATGGCCTCAACATCGGCAAGGCCTGGCTGCTGCCGCCGACGC
TGACCCTGCAATATCACTTCACCGATTTCGGCGCCTTCAAGCCCTATGTCGGCGCCGGCGTGAACTACACGGTGTTCTTC
AACCAGAGCGCCGCCAACCAGGTGGTCAACGGTCTCGCTGTCACCAACCTGAAGATCTCGAACCAGTGGGGCGCCGCGGT
CCAGTTCGGCTTCGACTACATGCTCGACAAGCATTGGGGCCTGAACGTCGACGTCAAGAAGCTGTGGCTGCAGCCGAACT
ACTCGGCGACCGTCAACGGCGTCATCCCCGTCACCGGCCGCGCCAACATCGACCCCTGGCTGGTCGGTGCCGGCGTCACC
TACAAGTTCTGA

Upstream 100 bases:

>100_bases
CAATCGAATGGTGTCCCTGCCACATCTGTGACCGCAAGAGCGCGGCTTGTCCGCGCGGATTGAGCGGACGTGCAGCTCAA
GTGTGGCTATGGGGACCTCG

Downstream 100 bases:

>100_bases
TTGCTAGCGTTCCTTCCAGACTTGAATGGCGCCGGTTGACCGGCGCCATTTTTTTCGAGGGAAGATTGCTGCTCGCGGAT
TTGAGTGTGGCGGGGATCTC

Product: putative outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MNRTFQLSSSLLVLAAICGAMGSAQAADLEAAPVITKAPVIEAWNPWMIRVRALGVLPDAGGSTLNVTGVPALSSPNSSL
KISNQVVPELDISYFFTRNIAAELILGVTRHSISGTGALDGLNIGKAWLLPPTLTLQYHFTDFGAFKPYVGAGVNYTVFF
NQSAANQVVNGLAVTNLKISNQWGAAVQFGFDYMLDKHWGLNVDVKKLWLQPNYSATVNGVIPVTGRANIDPWLVGAGVT
YKF

Sequences:

>Translated_243_residues
MNRTFQLSSSLLVLAAICGAMGSAQAADLEAAPVITKAPVIEAWNPWMIRVRALGVLPDAGGSTLNVTGVPALSSPNSSL
KISNQVVPELDISYFFTRNIAAELILGVTRHSISGTGALDGLNIGKAWLLPPTLTLQYHFTDFGAFKPYVGAGVNYTVFF
NQSAANQVVNGLAVTNLKISNQWGAAVQFGFDYMLDKHWGLNVDVKKLWLQPNYSATVNGVIPVTGRANIDPWLVGAGVT
YKF
>Mature_243_residues
MNRTFQLSSSLLVLAAICGAMGSAQAADLEAAPVITKAPVIEAWNPWMIRVRALGVLPDAGGSTLNVTGVPALSSPNSSL
KISNQVVPELDISYFFTRNIAAELILGVTRHSISGTGALDGLNIGKAWLLPPTLTLQYHFTDFGAFKPYVGAGVNYTVFF
NQSAANQVVNGLAVTNLKISNQWGAAVQFGFDYMLDKHWGLNVDVKKLWLQPNYSATVNGVIPVTGRANIDPWLVGAGVT
YKF

Specific function: Acts As A Receptor For Colicin S4. [C]

COG id: COG3047

COG function: function code M; Outer membrane protein W

Gene ontology:

Cell location: Cell outer membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OmpW/AlkL family [H]

Homologues:

Organism=Escherichia coli, GI1787510, Length=226, Percent_Identity=28.7610619469027, Blast_Score=82, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011250
- InterPro:   IPR005618 [H]

Pfam domain/function: PF03922 OmpW [H]

EC number: NA

Molecular weight: Translated: 25997; Mature: 25997

Theoretical pI: Translated: 8.94; Mature: 8.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRTFQLSSSLLVLAAICGAMGSAQAADLEAAPVITKAPVIEAWNPWMIRVRALGVLPDA
CCCEEECCCHHHHHHHHHHCCCCCCCCCCCCCCEEECCCEEECCCCEEEEEEEEEECCCC
GGSTLNVTGVPALSSPNSSLKISNQVVPELDISYFFTRNIAAELILGVTRHSISGTGALD
CCCEEEEECCCCCCCCCCCEEECCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCC
GLNIGKAWLLPPTLTLQYHFTDFGAFKPYVGAGVNYTVFFNQSAANQVVNGLAVTNLKIS
CCCCCCEEECCCEEEEEEEECCCCCCCCHHCCCCEEEEEECCCHHHHHHCCEEEEEEEEC
NQWGAAVQFGFDYMLDKHWGLNVDVKKLWLQPNYSATVNGVIPVTGRANIDPWLVGAGVT
CCCCCEEEECHHEEECCCCCCCEEEEEEEECCCCCEEEEEEEEECCCCCCCCEEEECCEE
YKF
ECC
>Mature Secondary Structure
MNRTFQLSSSLLVLAAICGAMGSAQAADLEAAPVITKAPVIEAWNPWMIRVRALGVLPDA
CCCEEECCCHHHHHHHHHHCCCCCCCCCCCCCCEEECCCEEECCCCEEEEEEEEEECCCC
GGSTLNVTGVPALSSPNSSLKISNQVVPELDISYFFTRNIAAELILGVTRHSISGTGALD
CCCEEEEECCCCCCCCCCCEEECCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCC
GLNIGKAWLLPPTLTLQYHFTDFGAFKPYVGAGVNYTVFFNQSAANQVVNGLAVTNLKIS
CCCCCCEEECCCEEEEEEEECCCCCCCCHHCCCCEEEEEECCCHHHHHHCCEEEEEEEEC
NQWGAAVQFGFDYMLDKHWGLNVDVKKLWLQPNYSATVNGVIPVTGRANIDPWLVGAGVT
CCCCCEEEECHHEEECCCCCCCEEEEEEEECCCCCEEEEEEEEECCCCCCCCEEEECCEE
YKF
ECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]