Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
---|---|
Accession | NC_009445 |
Length | 7,456,587 |
Click here to switch to the map view.
The map label for this gene is 146343187
Identifier: 146343187
GI number: 146343187
Start: 6646416
End: 6647588
Strand: Direct
Name: 146343187
Synonym: BRADO6390
Alternate gene names: NA
Gene position: 6646416-6647588 (Clockwise)
Preceding gene: 146343185
Following gene: 146343188
Centisome position: 89.13
GC content: 58.91
Gene sequence:
>1173_bases ATGGCTAAGAGCGCGAAGGCCTTGATCAACCCGGCCATGCTCGCATGGGCGCGGGAACAAGCCGGGATCAGCCCGGACGA AGCCGCTCGTCGTCTTCACATCGAAGAAGACCGCCTGAGCGCCCTTGAAAAAGGGGATGAGACACCGACCTTCGCCAAGC TGCTGGAGATTGCGGATCTCTATAAGCGCCCGGTCAGCCTGTTCTACCTAAAAACCCCCCCTAAGGGTTGGCAGCCGATA CAGGACTTTCGGCGGCTACCTGGCGTCGACAGCGGCTTTTCTCCGCAGCTTACTTACGCCATTCGACAGGCTCGGGAGCG CCGTGAAATCGCGCTCACCGTCCGCGACGAACTTGGCGAGCCGGCCCGGCCCTTCGAGTTGAAGGCCACGCTGAAGACCG ATGTTGAAATGCTCGGCCAGGAGATCCGAGAATACGTTGGCGTGACCGAAGCCAAGCAACAGCGTTTCGGCCGCAAGGCG TTCGATGGCTGGCGAACGGCTATAGAAGCCAAGGACATTCTCGTGTTCGTGGTGCCCCGGCTAAAGATCCGTGAGATGCG TGGCACGGCTCTGGCCGAACAGAAAATGCCGGTGATCCTTATCAATGGCAAGGATCGGAGCAATGGCCGCGTGTTCACGC TTCTGCACGAGTTCTGTCACTTGGCCCTAAGGCAAAGCGGCGTGAGCAACATGGGCGGCGACAGAAACGACGCGCCTCAC CCCGACGTCGAGAAATTCTGCAACGCGGTCGCGGCCGCTGCCCTTATGCCGCGCGACTGGCTGCTTCGAGAACAACTAGT TGCGCAGAAAGGCAGCCAGAAGAGTTGGCGGGACGACGAATTGGACGCTTTAGCTCTGCGCTTCGGCGTCAGTCAGGAAG CTGTACTGCGACGGCTGCTGACGCTGGGGCGAACGACCCAGGCCTTCTATGACAGCAAGCGCGTCGATTTCCAGAAGATC TATGCGCAACTCGATGAGCAGAAGGAGCCTTCCGAAGGTGGGCCAAAGTACCACCATGTTGTGCTTAGTCAGCTCGGCAG GACGTTCACCCAGCTTATCTTTCAAGGCTATCACGATCGCTACTTTACGCTGCGCGATGTCGCAGGTCTTCTGAACATGA AGGTTACGACCGTTCCCGTGATGGAAAAGGCAGCCTTTGGCATGGCGGGATAG
Upstream 100 bases:
>100_bases ACCCTTCGCATCACCTGAACGAATTTTTAGGCCGACTTTGCTGAAAGTTGTGCCGATCGGTTGACGGCCGGGTTAGAATC TCCTTCGGGGGACGTAGAAG
Downstream 100 bases:
>100_bases CCTGGCATGGCTAAGAAGATCTACTGCATCGATACAAGCGCTCTGATCGCCGCCTGGTACGAGCGGTACAAACCCAACCG CTTTCCGAAGCTATGGGACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 390; Mature: 389
Protein sequence:
>390_residues MAKSAKALINPAMLAWAREQAGISPDEAARRLHIEEDRLSALEKGDETPTFAKLLEIADLYKRPVSLFYLKTPPKGWQPI QDFRRLPGVDSGFSPQLTYAIRQARERREIALTVRDELGEPARPFELKATLKTDVEMLGQEIREYVGVTEAKQQRFGRKA FDGWRTAIEAKDILVFVVPRLKIREMRGTALAEQKMPVILINGKDRSNGRVFTLLHEFCHLALRQSGVSNMGGDRNDAPH PDVEKFCNAVAAAALMPRDWLLREQLVAQKGSQKSWRDDELDALALRFGVSQEAVLRRLLTLGRTTQAFYDSKRVDFQKI YAQLDEQKEPSEGGPKYHHVVLSQLGRTFTQLIFQGYHDRYFTLRDVAGLLNMKVTTVPVMEKAAFGMAG
Sequences:
>Translated_390_residues MAKSAKALINPAMLAWAREQAGISPDEAARRLHIEEDRLSALEKGDETPTFAKLLEIADLYKRPVSLFYLKTPPKGWQPI QDFRRLPGVDSGFSPQLTYAIRQARERREIALTVRDELGEPARPFELKATLKTDVEMLGQEIREYVGVTEAKQQRFGRKA FDGWRTAIEAKDILVFVVPRLKIREMRGTALAEQKMPVILINGKDRSNGRVFTLLHEFCHLALRQSGVSNMGGDRNDAPH PDVEKFCNAVAAAALMPRDWLLREQLVAQKGSQKSWRDDELDALALRFGVSQEAVLRRLLTLGRTTQAFYDSKRVDFQKI YAQLDEQKEPSEGGPKYHHVVLSQLGRTFTQLIFQGYHDRYFTLRDVAGLLNMKVTTVPVMEKAAFGMAG >Mature_389_residues AKSAKALINPAMLAWAREQAGISPDEAARRLHIEEDRLSALEKGDETPTFAKLLEIADLYKRPVSLFYLKTPPKGWQPIQ DFRRLPGVDSGFSPQLTYAIRQARERREIALTVRDELGEPARPFELKATLKTDVEMLGQEIREYVGVTEAKQQRFGRKAF DGWRTAIEAKDILVFVVPRLKIREMRGTALAEQKMPVILINGKDRSNGRVFTLLHEFCHLALRQSGVSNMGGDRNDAPHP DVEKFCNAVAAAALMPRDWLLREQLVAQKGSQKSWRDDELDALALRFGVSQEAVLRRLLTLGRTTQAFYDSKRVDFQKIY AQLDEQKEPSEGGPKYHHVVLSQLGRTFTQLIFQGYHDRYFTLRDVAGLLNMKVTTVPVMEKAAFGMAG
Specific function: Unknown
COG id: COG2856
COG function: function code E; Predicted Zn peptidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44181; Mature: 44050
Theoretical pI: Translated: 9.79; Mature: 9.79
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKSAKALINPAMLAWAREQAGISPDEAARRLHIEEDRLSALEKGDETPTFAKLLEIADL CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHH YKRPVSLFYLKTPPKGWQPIQDFRRLPGVDSGFSPQLTYAIRQARERREIALTVRDELGE HHCCCEEEEEECCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHEEEEEHHHCCC PARPFELKATLKTDVEMLGQEIREYVGVTEAKQQRFGRKAFDGWRTAIEAKDILVFVVPR CCCCEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHHHHCCEEEEEECC LKIREMRGTALAEQKMPVILINGKDRSNGRVFTLLHEFCHLALRQSGVSNMGGDRNDAPH HHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC PDVEKFCNAVAAAALMPRDWLLREQLVAQKGSQKSWRDDELDALALRFGVSQEAVLRRLL CCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHH TLGRTTQAFYDSKRVDFQKIYAQLDEQKEPSEGGPKYHHVVLSQLGRTFTQLIFQGYHDR HHCCHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC YFTLRDVAGLLNMKVTTVPVMEKAAFGMAG HHHHHHHHHHHHCCEEEHHHHHHHHCCCCC >Mature Secondary Structure AKSAKALINPAMLAWAREQAGISPDEAARRLHIEEDRLSALEKGDETPTFAKLLEIADL CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHH YKRPVSLFYLKTPPKGWQPIQDFRRLPGVDSGFSPQLTYAIRQARERREIALTVRDELGE HHCCCEEEEEECCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHEEEEEHHHCCC PARPFELKATLKTDVEMLGQEIREYVGVTEAKQQRFGRKAFDGWRTAIEAKDILVFVVPR CCCCEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHHHHCCEEEEEECC LKIREMRGTALAEQKMPVILINGKDRSNGRVFTLLHEFCHLALRQSGVSNMGGDRNDAPH HHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC PDVEKFCNAVAAAALMPRDWLLREQLVAQKGSQKSWRDDELDALALRFGVSQEAVLRRLL CCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHH TLGRTTQAFYDSKRVDFQKIYAQLDEQKEPSEGGPKYHHVVLSQLGRTFTQLIFQGYHDR HHCCHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC YFTLRDVAGLLNMKVTTVPVMEKAAFGMAG HHHHHHHHHHHHCCEEEHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA