Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is 146343185
Identifier: 146343185
GI number: 146343185
Start: 6644318
End: 6644962
Strand: Direct
Name: 146343185
Synonym: BRADO6386
Alternate gene names: NA
Gene position: 6644318-6644962 (Clockwise)
Preceding gene: 146343184
Following gene: 146343187
Centisome position: 89.11
GC content: 54.88
Gene sequence:
>645_bases TTGTCCGGCTACGTAAAGGCTCAAATCCAACATTGGGATCAGGTGGACTGGTCTATCCTCCAGGCCGAGTTGGACGCAAT CGCCGCGAATGCAAGAAAGCTCGGGATCTGGGTCGTTGTCGGAGCCAACCACCAGCGCATAGCACCACTGTGGCCGCATA ACTCTTTGTATGTTATTTCCGAAAATGGCATCATTATCGGTCGCTATGATAAGCGGCTAATCTCCCACGCAGAATCAATC AGCTGGTACACGCCCGGTTCGGACCCAATCGTGTTCGAGGTCGATGGCTTCCGATTCGGTTGTGCGCTCTGCATCGAAAT CCATTTTCCGGAACTGTTCATGGAATATGGAAGGCTGGGGGTCGATGGCGTACTTTTCTCAGCCTACGCCGAGGACCCGA TCTTCGCAGTGACTGCCCAGGCCCACGCAGCAACCAATAACATCTGGATGAGCGTATCCACTCCTGCCGCCTGTCGCCCT AGACTACCTTGCAGCTTGATCGGGCCAGACGGCTACGTGTTCGGCCAATCAACGCTGGAGCAGGATCTTGTCTACGGGAC GCTGGACCGTTCGAAATACGAAATTGCTTTGACAAAGGCCCGTCCTTGGCGGGCTTCTGTCCGCGAGAACAAGAAAGGAC CGTAG
Upstream 100 bases:
>100_bases CATCACGTCCGACGTCAGAGTCAATGGCGCTCATATACGCGATTGCATGACGAAGGCGGCAGATCTAGGCGCGCGCCTTG TACATTTTCCCGAAGGTGCT
Downstream 100 bases:
>100_bases GACCAGTATCTGTCTTTCCAAAATCGTAAAATCCTCTTTCAAAGGCCCGCTAAGCGGCCCTGGCCTCGTTCGGTTGAAGC CCATGCAGGAAGTCCGCCGC
Product: putative nitrilase/N-carbamoyl-D-aminoacid amidohydrolase family protein
Products: NA
Alternate protein names: Hydrolase Protein; Carbon-Nitrogen Family Hydrolase; Carbon-Nitrogen Hydrolase; Hydrolase
Number of amino acids: Translated: 214; Mature: 213
Protein sequence:
>214_residues MSGYVKAQIQHWDQVDWSILQAELDAIAANARKLGIWVVVGANHQRIAPLWPHNSLYVISENGIIIGRYDKRLISHAESI SWYTPGSDPIVFEVDGFRFGCALCIEIHFPELFMEYGRLGVDGVLFSAYAEDPIFAVTAQAHAATNNIWMSVSTPAACRP RLPCSLIGPDGYVFGQSTLEQDLVYGTLDRSKYEIALTKARPWRASVRENKKGP
Sequences:
>Translated_214_residues MSGYVKAQIQHWDQVDWSILQAELDAIAANARKLGIWVVVGANHQRIAPLWPHNSLYVISENGIIIGRYDKRLISHAESI SWYTPGSDPIVFEVDGFRFGCALCIEIHFPELFMEYGRLGVDGVLFSAYAEDPIFAVTAQAHAATNNIWMSVSTPAACRP RLPCSLIGPDGYVFGQSTLEQDLVYGTLDRSKYEIALTKARPWRASVRENKKGP >Mature_213_residues SGYVKAQIQHWDQVDWSILQAELDAIAANARKLGIWVVVGANHQRIAPLWPHNSLYVISENGIIIGRYDKRLISHAESIS WYTPGSDPIVFEVDGFRFGCALCIEIHFPELFMEYGRLGVDGVLFSAYAEDPIFAVTAQAHAATNNIWMSVSTPAACRPR LPCSLIGPDGYVFGQSTLEQDLVYGTLDRSKYEIALTKARPWRASVRENKKGP
Specific function: Unknown
COG id: COG0388
COG function: function code R; Predicted amidohydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23868; Mature: 23737
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS50263 CN_HYDROLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGYVKAQIQHWDQVDWSILQAELDAIAANARKLGIWVVVGANHQRIAPLWPHNSLYVIS CCCEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEEEEECCCCCEECEECCCCCEEEEE ENGIIIGRYDKRLISHAESISWYTPGSDPIVFEVDGFRFGCALCIEIHFPELFMEYGRLG CCCEEEECCHHHHHHHHHHCEEECCCCCCEEEEECCCEEEEEEEEEEECHHHHHHHCCCC VDGVLFSAYAEDPIFAVTAQAHAATNNIWMSVSTPAACRPRLPCSLIGPDGYVFGQSTLE CCCEEEEEECCCCEEEEEEECCCCCCEEEEEECCCCCCCCCCCEEEECCCCEEECCCHHH QDLVYGTLDRSKYEIALTKARPWRASVRENKKGP HHHEEEECCCCEEEEEEECCCCCCCHHCCCCCCC >Mature Secondary Structure SGYVKAQIQHWDQVDWSILQAELDAIAANARKLGIWVVVGANHQRIAPLWPHNSLYVIS CCEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEEEEECCCCCEECEECCCCCEEEEE ENGIIIGRYDKRLISHAESISWYTPGSDPIVFEVDGFRFGCALCIEIHFPELFMEYGRLG CCCEEEECCHHHHHHHHHHCEEECCCCCCEEEEECCCEEEEEEEEEEECHHHHHHHCCCC VDGVLFSAYAEDPIFAVTAQAHAATNNIWMSVSTPAACRPRLPCSLIGPDGYVFGQSTLE CCCEEEEEECCCCEEEEEEECCCCCCEEEEEECCCCCCCCCCCEEEECCCCEEECCCHHH QDLVYGTLDRSKYEIALTKARPWRASVRENKKGP HHHEEEECCCCEEEEEEECCCCCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA