Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is 146343164
Identifier: 146343164
GI number: 146343164
Start: 6621996
End: 6624350
Strand: Direct
Name: 146343164
Synonym: BRADO6362
Alternate gene names: NA
Gene position: 6621996-6624350 (Clockwise)
Preceding gene: 146343163
Following gene: 146343165
Centisome position: 88.81
GC content: 67.64
Gene sequence:
>2355_bases ATGTCTTCCCCGTATAGCCCCGCCACCGCCGGTGCTCGCGCGTTCGGCGCCGCCAACATCACGACGACCCAGACGCAGCG CGTCTCGCAGAGCCTCAGCCGGCATCTCGACAAGTTCGCCCGCGAGCACGGCAAGCGCGTGCAGGAGCTGATCAGCGAAG GCGCCGGCCTCGTGCAGGCGTTCAGCGCCGCGCAGGCCCATCTGCTCGACCACGTCAATGCCTATTGGATCGATGCCGGC CAGCGCATGGCCTTGACGCTCGACGTGCTGCGCGAGCGCGCCGACAATGACGCCCAGCACGAGGCCGCCGGGACGCCGCC GGTGCTGATCTACGATCATGAGGTCGCGCTCGACGGCCGCAGCCTGCCTCGCCCGGTCAACTACATGCTGCTGAAGATCC TGCCGCCGGCGGGAGTCGTCACCTATGAGTGGAAGCGGCCCTATGTCATCATCGATCCGCGCGCCGGCCACGGCGCGGGG ATCGGCGGCTTCAAGCAGGACAGCCAGGTCGGCGTCGCCTTGCATGACGGCCATCAGGTGTATTTCGTCGTGTTCCGGCC GCATCCCGAGCCGACGCAGACGCTGGCCGACGTGATGCGCGCCGAAGCGGAGTTCATCGCCGAGGTGCATCGCCGCCATC CCGAGGCGCCGAAGCCGATCATCGTCGGCAACTGCCAGGGCGGCTGGGCGACCCTGATCCTGGCCGCGGCCAATCCCGAC ATCACCGGGCCGTTGGTCGTCAACGGGGCGCCGGTGGCCTACTGGTCGGGAAGGCTCGGCGAGAATCCGATGCGCTACAA TGGCGGCCTGCTCGGCGGCATCCTGCCGGCGCTGCTGCTCTCCGATCTCGGCGGCGGCGAGTTCGACGGCGTGCATCTCG TCTCGAACTTCGAGATGCTCAATCCCGGCCGCAACTATTTCGGCAAATATTTCGATCTGTACACCAGCCCGGAAAAGGGC CGCGCCAGCTTCCTCGAATTCGAGCGCTGGTGGGGCGGCTTCCATTTCATGAACGAGCAGGAGATCCGCTGGATCGTCGA GCAGCTGTTCATCGGCAACCGGCTGTCACGCGGCGAGGCGCGCATCGAGCGCGGCCGCCAGCTCGATCTCAAGGCGATCC GCTCGCCGATCATCGTGTTCGCGAGCTGGGGCGACAACATCACCCCGCCGCAGCAGGCGCTGAACTGGATCGTCGACACC TATGCCGACGAGCACGAGATCCGCATCCGCGGCCAGCGCATCATCTACATGGTGCACGACAAGGTCGGCCATCTCGGCAT CTTCGTGTCGTCGTCCATCGCGAAGAAGGAGCACACCGAGGTCGCCTCGACGATGAAGACGATCGAGGCGCTGGCGCCCG GCCTCTACGAGATGACGATCGACGAGCAGATCGGCGACGGCGTCGACGCGCGCTTCCACGTCTCGTTCCACGAGCGCAAA ATCTCGGATATTCTGGCGATCGACGACAATGACCGCAGTGAGGAGCGTGGCTTCGCCGCGGTGGCGCGGCTGTCCGAGCT CGGTGCCGAGCTCTATGATCTCACCGCGCGCCCGCTGGTGCAGTCGATGGTGACCGACGAAGTGGCGAAGCTGATGCGCG ATGCGCATCCGGCGCGCGTGACTCGGCGCGCGTTCGGCGGCAACAGCGCCGGCGCCCAGGCGATCCGCAAGGCGGCCGAG CAGGCCCGCGCCGAGCGGGCGCTGGCGGCGCCGGACAATCCGTTCCTCGCGCTGGAGCAGCTCTGGGCTAAGAGCATCAC CCAGGCGTTCGACGTGTTTCGCGACGTCCGCGACACGCTTTACGAAGCCGCCTTCCTGTCGATCTACAGCTCGCCGCTGA TGGATGCGATCGCCTCGACGCACGCCTTTCAGCGCGTGCATCGCGAGCCGAAGGAGCTGCGCTTCCTGCCCGAGGTGCAG GCGATCCTGCTCGGGATCGATCGCGGCGGCTTCGAGGAGGCGGTGATCCGGATGCTGATCCTGCTGGCGGAGTCGCGCGG CTCGGTGCGCCGCGACCGGCTGGAGCGCTCCGCCAGGGTGCTGACCAAGGACGAGCCGTTCGCCTCGCTCGGCGCCGAGC GCCGCGCCGCGCTGATCCGCGAGCAGTCGATCATCGTCAAGTTCGAACCGGAGCAGTCGGTCAAGACGTTGGCCGAGCTG TTGCCCGAGGTCGACGACCGCAACCGCGCCATCGACGTCGTCGAGTTCATCGCCGGCTCGGTCGAGGACATGGAGCCGAA CACGATCCGCACCCTGCAGCGGCTGCGCGAGGCGCTCGGCTTGCCGCCGCTGGCGTTGGCCGCGGTGTCGGCCGATCCGC TCAAGGAGAACGGCGCGATCCGCGACGTCGCCTGA
Upstream 100 bases:
>100_bases CCGCATGATCGCCGAGCACACGGCCGAGATCCTGGGCCTGATGCAGCCCGCGGATTCGATGCCGCTCACGCGCCTGACCG CCTGACCGAAGGGACCGCAC
Downstream 100 bases:
>100_bases CGGAAGAGGACGATGTCCGAGAGCGCTCACGATCCGCTGCCGACCGTCTGGAATCCGGACGACCGCATCGGCGACATGCT GAAGGGCCTGCGCGGCCTCG
Product: hypothetical protein
Products: NA
Alternate protein names: ORFA [H]
Number of amino acids: Translated: 784; Mature: 783
Protein sequence:
>784_residues MSSPYSPATAGARAFGAANITTTQTQRVSQSLSRHLDKFAREHGKRVQELISEGAGLVQAFSAAQAHLLDHVNAYWIDAG QRMALTLDVLRERADNDAQHEAAGTPPVLIYDHEVALDGRSLPRPVNYMLLKILPPAGVVTYEWKRPYVIIDPRAGHGAG IGGFKQDSQVGVALHDGHQVYFVVFRPHPEPTQTLADVMRAEAEFIAEVHRRHPEAPKPIIVGNCQGGWATLILAAANPD ITGPLVVNGAPVAYWSGRLGENPMRYNGGLLGGILPALLLSDLGGGEFDGVHLVSNFEMLNPGRNYFGKYFDLYTSPEKG RASFLEFERWWGGFHFMNEQEIRWIVEQLFIGNRLSRGEARIERGRQLDLKAIRSPIIVFASWGDNITPPQQALNWIVDT YADEHEIRIRGQRIIYMVHDKVGHLGIFVSSSIAKKEHTEVASTMKTIEALAPGLYEMTIDEQIGDGVDARFHVSFHERK ISDILAIDDNDRSEERGFAAVARLSELGAELYDLTARPLVQSMVTDEVAKLMRDAHPARVTRRAFGGNSAGAQAIRKAAE QARAERALAAPDNPFLALEQLWAKSITQAFDVFRDVRDTLYEAAFLSIYSSPLMDAIASTHAFQRVHREPKELRFLPEVQ AILLGIDRGGFEEAVIRMLILLAESRGSVRRDRLERSARVLTKDEPFASLGAERRAALIREQSIIVKFEPEQSVKTLAEL LPEVDDRNRAIDVVEFIAGSVEDMEPNTIRTLQRLREALGLPPLALAAVSADPLKENGAIRDVA
Sequences:
>Translated_784_residues MSSPYSPATAGARAFGAANITTTQTQRVSQSLSRHLDKFAREHGKRVQELISEGAGLVQAFSAAQAHLLDHVNAYWIDAG QRMALTLDVLRERADNDAQHEAAGTPPVLIYDHEVALDGRSLPRPVNYMLLKILPPAGVVTYEWKRPYVIIDPRAGHGAG IGGFKQDSQVGVALHDGHQVYFVVFRPHPEPTQTLADVMRAEAEFIAEVHRRHPEAPKPIIVGNCQGGWATLILAAANPD ITGPLVVNGAPVAYWSGRLGENPMRYNGGLLGGILPALLLSDLGGGEFDGVHLVSNFEMLNPGRNYFGKYFDLYTSPEKG RASFLEFERWWGGFHFMNEQEIRWIVEQLFIGNRLSRGEARIERGRQLDLKAIRSPIIVFASWGDNITPPQQALNWIVDT YADEHEIRIRGQRIIYMVHDKVGHLGIFVSSSIAKKEHTEVASTMKTIEALAPGLYEMTIDEQIGDGVDARFHVSFHERK ISDILAIDDNDRSEERGFAAVARLSELGAELYDLTARPLVQSMVTDEVAKLMRDAHPARVTRRAFGGNSAGAQAIRKAAE QARAERALAAPDNPFLALEQLWAKSITQAFDVFRDVRDTLYEAAFLSIYSSPLMDAIASTHAFQRVHREPKELRFLPEVQ AILLGIDRGGFEEAVIRMLILLAESRGSVRRDRLERSARVLTKDEPFASLGAERRAALIREQSIIVKFEPEQSVKTLAEL LPEVDDRNRAIDVVEFIAGSVEDMEPNTIRTLQRLREALGLPPLALAAVSADPLKENGAIRDVA >Mature_783_residues SSPYSPATAGARAFGAANITTTQTQRVSQSLSRHLDKFAREHGKRVQELISEGAGLVQAFSAAQAHLLDHVNAYWIDAGQ RMALTLDVLRERADNDAQHEAAGTPPVLIYDHEVALDGRSLPRPVNYMLLKILPPAGVVTYEWKRPYVIIDPRAGHGAGI GGFKQDSQVGVALHDGHQVYFVVFRPHPEPTQTLADVMRAEAEFIAEVHRRHPEAPKPIIVGNCQGGWATLILAAANPDI TGPLVVNGAPVAYWSGRLGENPMRYNGGLLGGILPALLLSDLGGGEFDGVHLVSNFEMLNPGRNYFGKYFDLYTSPEKGR ASFLEFERWWGGFHFMNEQEIRWIVEQLFIGNRLSRGEARIERGRQLDLKAIRSPIIVFASWGDNITPPQQALNWIVDTY ADEHEIRIRGQRIIYMVHDKVGHLGIFVSSSIAKKEHTEVASTMKTIEALAPGLYEMTIDEQIGDGVDARFHVSFHERKI SDILAIDDNDRSEERGFAAVARLSELGAELYDLTARPLVQSMVTDEVAKLMRDAHPARVTRRAFGGNSAGAQAIRKAAEQ ARAERALAAPDNPFLALEQLWAKSITQAFDVFRDVRDTLYEAAFLSIYSSPLMDAIASTHAFQRVHREPKELRFLPEVQA ILLGIDRGGFEEAVIRMLILLAESRGSVRRDRLERSARVLTKDEPFASLGAERRAALIREQSIIVKFEPEQSVKTLAELL PEVDDRNRAIDVVEFIAGSVEDMEPNTIRTLQRLREALGLPPLALAAVSADPLKENGAIRDVA
Specific function: Unknown
COG id: COG3243
COG function: function code I; Poly(3-hydroxyalkanoate) synthetase
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 86892; Mature: 86761
Theoretical pI: Translated: 6.20; Mature: 6.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSPYSPATAGARAFGAANITTTQTQRVSQSLSRHLDKFAREHGKRVQELISEGAGLVQA CCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH FSAAQAHLLDHVNAYWIDAGQRMALTLDVLRERADNDAQHEAAGTPPVLIYDHEVALDGR HHHHHHHHHHCCCEEEECCCCEEEHHHHHHHHHCCCCCHHHCCCCCCEEEEECEEEECCC SLPRPVNYMLLKILPPAGVVTYEWKRPYVIIDPRAGHGAGIGGFKQDSQVGVALHDGHQV CCCCCHHEEEEEEECCCCEEEEECCCCEEEECCCCCCCCCCCCCCCCCCEEEEEECCCEE YFVVFRPHPEPTQTLADVMRAEAEFIAEVHRRHPEAPKPIIVGNCQGGWATLILAAANPD EEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCEEEEEEEECCCC ITGPLVVNGAPVAYWSGRLGENPMRYNGGLLGGILPALLLSDLGGGEFDGVHLVSNFEML CCCCEEECCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCEEC NPGRNYFGKYFDLYTSPEKGRASFLEFERWWGGFHFMNEQEIRWIVEQLFIGNRLSRGEA CCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCHH RIERGRQLDLKAIRSPIIVFASWGDNITPPQQALNWIVDTYADEHEIRIRGQRIIYMVHD HHHCCCCCCHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEECCEEEEEEEC KVGHLGIFVSSSIAKKEHTEVASTMKTIEALAPGLYEMTIDEQIGDGVDARFHVSFHERK CCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHCCCCCCEEEEEHHHHH ISDILAIDDNDRSEERGFAAVARLSELGAELYDLTARPLVQSMVTDEVAKLMRDAHPARV HHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH TRRAFGGNSAGAQAIRKAAEQARAERALAAPDNPFLALEQLWAKSITQAFDVFRDVRDTL HHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH YEAAFLSIYSSPLMDAIASTHAFQRVHREPKELRFLPEVQAILLGIDRGGFEEAVIRMLI HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCHHHHHHHEECCCCCHHHHHHHHHH LLAESRGSVRRDRLERSARVLTKDEPFASLGAERRAALIREQSIIVKFEPEQSVKTLAEL HHHHCCCCHHHHHHHHHHHHCCCCCCHHHHCHHHHHHHHHCCEEEEEECCHHHHHHHHHH LPEVDDRNRAIDVVEFIAGSVEDMEPNTIRTLQRLREALGLPPLALAAVSADPLKENGAI HCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCC RDVA CCCC >Mature Secondary Structure SSPYSPATAGARAFGAANITTTQTQRVSQSLSRHLDKFAREHGKRVQELISEGAGLVQA CCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH FSAAQAHLLDHVNAYWIDAGQRMALTLDVLRERADNDAQHEAAGTPPVLIYDHEVALDGR HHHHHHHHHHCCCEEEECCCCEEEHHHHHHHHHCCCCCHHHCCCCCCEEEEECEEEECCC SLPRPVNYMLLKILPPAGVVTYEWKRPYVIIDPRAGHGAGIGGFKQDSQVGVALHDGHQV CCCCCHHEEEEEEECCCCEEEEECCCCEEEECCCCCCCCCCCCCCCCCCEEEEEECCCEE YFVVFRPHPEPTQTLADVMRAEAEFIAEVHRRHPEAPKPIIVGNCQGGWATLILAAANPD EEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCEEEEEEEECCCC ITGPLVVNGAPVAYWSGRLGENPMRYNGGLLGGILPALLLSDLGGGEFDGVHLVSNFEML CCCCEEECCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCEEC NPGRNYFGKYFDLYTSPEKGRASFLEFERWWGGFHFMNEQEIRWIVEQLFIGNRLSRGEA CCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCHH RIERGRQLDLKAIRSPIIVFASWGDNITPPQQALNWIVDTYADEHEIRIRGQRIIYMVHD HHHCCCCCCHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEECCEEEEEEEC KVGHLGIFVSSSIAKKEHTEVASTMKTIEALAPGLYEMTIDEQIGDGVDARFHVSFHERK CCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHCCCCCCEEEEEHHHHH ISDILAIDDNDRSEERGFAAVARLSELGAELYDLTARPLVQSMVTDEVAKLMRDAHPARV HHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH TRRAFGGNSAGAQAIRKAAEQARAERALAAPDNPFLALEQLWAKSITQAFDVFRDVRDTL HHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH YEAAFLSIYSSPLMDAIASTHAFQRVHREPKELRFLPEVQAILLGIDRGGFEEAVIRMLI HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCHHHHHHHEECCCCCHHHHHHHHHH LLAESRGSVRRDRLERSARVLTKDEPFASLGAERRAALIREQSIIVKFEPEQSVKTLAEL HHHHCCCCHHHHHHHHHHHHCCCCCCHHHHCHHHHHHHHHCCEEEEEECCHHHHHHHHHH LPEVDDRNRAIDVVEFIAGSVEDMEPNTIRTLQRLREALGLPPLALAAVSADPLKENGAI HCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCC RDVA CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10094701 [H]