Click here to switch to the map view.

The map label for this gene is pppA [C]

Identifier: 146343140

GI number: 146343140

Start: 6593419

End: 6593952

Strand: Direct

Name: pppA [C]

Synonym: BRADO6338

Alternate gene names: 146343140

Gene position: 6593419-6593952 (Clockwise)

Preceding gene: 146343139

Following gene: 146343151

Centisome position: 88.42

GC content: 64.98

Gene sequence:

>534_bases
ATGGCAATGCTGCGGCCATCGAGGATCGAAGTTCGAGATCGCGTGACCGACTCCATCGCCAGCATCTGCATCATCGTCCT
GCTTCTGGCCTGCGCCGGACTGATCTGGACCGATCTGCGCGAGGGCCTGCTGCCGGACTGGATGAATGCGCTGGTGGCGG
CGAGCGGGTTGGTCCGGACCGTCGTGCTCACCGATCTCCCGCAGGCCTTGTGGGATATCGCCGCGGCCCTGGCCGTCGGC
GCCGCACTGCTGTTGCTGCGCCGTCTTTACCTGATCGCACGAGGCCGCCAGGGGCTGGGTCTCGGCGACGTCAAATTTCT
GATGGCCGCGACGCTCTGGGCCGGCCTGCCCGGTCTTCCGATCCTGCTGCTGATCGCCACGATGACGGCGCTTGTCGCTG
TGCTCTTTCTTAGGATGCGCGGCCAAAGCATGACGGGCGAGACCGCGTTGCCGTTCGGCCCGTTCCTGGTCATCGGCCTT
CTCAGCGTGCTTGTCCTGCAGACATGGGGAGGCGATTGGATCATTGCGTCGTGA

Upstream 100 bases:

>100_bases
CACCTGTATCGAGCTGGCGCGGCATCGCGGTCCGCGCCGTCGGCGGCTGGGTCGCCGCGATCGGCCTGATGATGGCTGGA
CTATCGCTGGCGGCCTGAGC

Downstream 100 bases:

>100_bases
CGTCGGCGGCGTCGCTCAACGCGCACGGCGCGCCATCCGCTCGCGTGGCGCAGGTGAGGCCGGCGTCACGCCGCCGGTCT
GCACATCGCCCTCTCCGGCC

Product: putative Type II secretory pathway, prepilin signal peptidase

Products: NA

Alternate protein names: Peptidase

Number of amino acids: Translated: 177; Mature: 176

Protein sequence:

>177_residues
MAMLRPSRIEVRDRVTDSIASICIIVLLLACAGLIWTDLREGLLPDWMNALVAASGLVRTVVLTDLPQALWDIAAALAVG
AALLLLRRLYLIARGRQGLGLGDVKFLMAATLWAGLPGLPILLLIATMTALVAVLFLRMRGQSMTGETALPFGPFLVIGL
LSVLVLQTWGGDWIIAS

Sequences:

>Translated_177_residues
MAMLRPSRIEVRDRVTDSIASICIIVLLLACAGLIWTDLREGLLPDWMNALVAASGLVRTVVLTDLPQALWDIAAALAVG
AALLLLRRLYLIARGRQGLGLGDVKFLMAATLWAGLPGLPILLLIATMTALVAVLFLRMRGQSMTGETALPFGPFLVIGL
LSVLVLQTWGGDWIIAS
>Mature_176_residues
AMLRPSRIEVRDRVTDSIASICIIVLLLACAGLIWTDLREGLLPDWMNALVAASGLVRTVVLTDLPQALWDIAAALAVGA
ALLLLRRLYLIARGRQGLGLGDVKFLMAATLWAGLPGLPILLLIATMTALVAVLFLRMRGQSMTGETALPFGPFLVIGLL
SVLVLQTWGGDWIIAS

Specific function: Unknown

COG id: COG1989

COG function: function code NOU; Type II secretory pathway, prepilin signal peptidase PulO and related peptidases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18956; Mature: 18825

Theoretical pI: Translated: 8.79; Mature: 8.79

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMLRPSRIEVRDRVTDSIASICIIVLLLACAGLIWTDLREGLLPDWMNALVAASGLVRT
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
VVLTDLPQALWDIAAALAVGAALLLLRRLYLIARGRQGLGLGDVKFLMAATLWAGLPGLP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHH
ILLLIATMTALVAVLFLRMRGQSMTGETALPFGPFLVIGLLSVLVLQTWGGDWIIAS
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECC
>Mature Secondary Structure 
AMLRPSRIEVRDRVTDSIASICIIVLLLACAGLIWTDLREGLLPDWMNALVAASGLVRT
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
VVLTDLPQALWDIAAALAVGAALLLLRRLYLIARGRQGLGLGDVKFLMAATLWAGLPGLP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHH
ILLLIATMTALVAVLFLRMRGQSMTGETALPFGPFLVIGLLSVLVLQTWGGDWIIAS
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA