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The map label for this gene is potH [H]

Identifier: 146342996

GI number: 146342996

Start: 6410458

End: 6411567

Strand: Direct

Name: potH [H]

Synonym: BRADO6180

Alternate gene names: 146342996

Gene position: 6410458-6411567 (Clockwise)

Preceding gene: 146342995

Following gene: 146342997

Centisome position: 85.97

GC content: 67.84

Gene sequence:

>1110_bases
ATGCTGTCCTTCTTCGTCGTGCCGCTGGTGACGATGATGAAATCGGCCGTGTCCGATCCCGTCGCGACCGAGGCGCTGCC
GCGCACCGCGCGCGCATTGTCCGACTGGGACCGCAGCGGCACGCCGCCGGCGACGGCACAGGCCGCCCTCGCCGATGACA
TCCGCGCGCTCCGGAACGACGAGCAGTTCGGCGATCTCGTCCGCCGCCTCAACAGCGCGCAGTCCGGCTTCCGTAGCCTG
CTCGGCAAGACCCGCCGCGCGCTCGACGGCGCGGGTACGGTTGACCTCGCAAACATCGACTCGCGCTGGACCGAGACCTC
GTATTGGGTGACCATCGGCGAGGCCGTCGCCTCGCCCTGGACCGACAAGAACCTGCTCGCCGCCGTCGATCTGGAGCGCA
ATTCTGCGGGCAACGTCGCGGCGATGCCGGAGGGCGCGTCGGCCAACCGCCTGATCATGATCCGGACGTTCGTGACGTCG
GCGCTGGTGACGCTCGCCTGCATCCTGATCGGCCTGCCCTATGCGATGGTCGCAGCGTCCGTCGAGGGCTGGCGCCGGCA
GGTGCTGCTCGGCGCCGTGCTGCTGCCGCTGTGGACCTCGCTCCTGGTGCGCACCGCGGCCTGGTATGTCGTGCTGCAGG
ACAACGGGCTAATCAACGCCACGCTGAGGGGACTCGGCCTGACCTCAGGACCGGTGCCGCTGATGTTCAACCGGCTTGGC
GTCGTCATCGCGATGACCCATGTGCTGCTGCCGTTCATGGTGCTGCCGATCTTCAGCGTGCTGATCGCGATCCCGCGCAA
TTTGATGCCGGCGGCGGCCTCGCTCGGCGCGCATCCCTTGCGCGCCTTCCTTCATGTGCTGCTGCCGCTGTCGATGCGCG
GCGTCGTCTCCGGAGCGCTGCTCGTGTTCATGGCCGCCCTCGGCTACTACATCACGCCGGCGCTGATCGGCGGCGCCAAT
GACCAGATGATCTCGTCTGTCATCGCCTATTACGCGACCGGGGCGGCGAACTGGGGCATGGCCGGCGCGCTCGGCCTGGT
GCTTTTGGTGATGACCATCCTGCTCTACGCCATCTATATGCGCCTGACGGTCGAGGAGCAGCGCGCATGA

Upstream 100 bases:

>100_bases
TGTCGTTCGCCGCGTCGGATGTCTGGGTGGTGGGATCATGCGGCCAGACATCAGCCAGCGCCTGAAGGCCGCCCTGCTGC
TCGCGCCGCTGCTGGCGTTC

Downstream 100 bases:

>100_bases
GGCCGCTGCCGATCCTCAAAGCGGTGTTCGCCGCGCTCGCCGTGGTGTTTCTGCTCGGCCCGCTGGTGGCCGTGCTGCCG
CTGTCGCTGACCGACAGCGT

Product: spermidine/putrescine ABC transporter permease

Products: ADP; phosphate; putrescine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 369; Mature: 369

Protein sequence:

>369_residues
MLSFFVVPLVTMMKSAVSDPVATEALPRTARALSDWDRSGTPPATAQAALADDIRALRNDEQFGDLVRRLNSAQSGFRSL
LGKTRRALDGAGTVDLANIDSRWTETSYWVTIGEAVASPWTDKNLLAAVDLERNSAGNVAAMPEGASANRLIMIRTFVTS
ALVTLACILIGLPYAMVAASVEGWRRQVLLGAVLLPLWTSLLVRTAAWYVVLQDNGLINATLRGLGLTSGPVPLMFNRLG
VVIAMTHVLLPFMVLPIFSVLIAIPRNLMPAAASLGAHPLRAFLHVLLPLSMRGVVSGALLVFMAALGYYITPALIGGAN
DQMISSVIAYYATGAANWGMAGALGLVLLVMTILLYAIYMRLTVEEQRA

Sequences:

>Translated_369_residues
MLSFFVVPLVTMMKSAVSDPVATEALPRTARALSDWDRSGTPPATAQAALADDIRALRNDEQFGDLVRRLNSAQSGFRSL
LGKTRRALDGAGTVDLANIDSRWTETSYWVTIGEAVASPWTDKNLLAAVDLERNSAGNVAAMPEGASANRLIMIRTFVTS
ALVTLACILIGLPYAMVAASVEGWRRQVLLGAVLLPLWTSLLVRTAAWYVVLQDNGLINATLRGLGLTSGPVPLMFNRLG
VVIAMTHVLLPFMVLPIFSVLIAIPRNLMPAAASLGAHPLRAFLHVLLPLSMRGVVSGALLVFMAALGYYITPALIGGAN
DQMISSVIAYYATGAANWGMAGALGLVLLVMTILLYAIYMRLTVEEQRA
>Mature_369_residues
MLSFFVVPLVTMMKSAVSDPVATEALPRTARALSDWDRSGTPPATAQAALADDIRALRNDEQFGDLVRRLNSAQSGFRSL
LGKTRRALDGAGTVDLANIDSRWTETSYWVTIGEAVASPWTDKNLLAAVDLERNSAGNVAAMPEGASANRLIMIRTFVTS
ALVTLACILIGLPYAMVAASVEGWRRQVLLGAVLLPLWTSLLVRTAAWYVVLQDNGLINATLRGLGLTSGPVPLMFNRLG
VVIAMTHVLLPFMVLPIFSVLIAIPRNLMPAAASLGAHPLRAFLHVLLPLSMRGVVSGALLVFMAALGYYITPALIGGAN
DQMISSVIAYYATGAANWGMAGALGLVLLVMTILLYAIYMRLTVEEQRA

Specific function: Required for the activity of the bacterial periplasmic transport system of putrescine [H]

COG id: COG1176

COG function: function code E; ABC-type spermidine/putrescine transport system, permease component I

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787080, Length=217, Percent_Identity=35.9447004608295, Blast_Score=142, Evalue=3e-35,
Organism=Escherichia coli, GI1787369, Length=238, Percent_Identity=30.2521008403361, Blast_Score=123, Evalue=2e-29,
Organism=Escherichia coli, GI1787713, Length=227, Percent_Identity=31.2775330396476, Blast_Score=96, Evalue=4e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 39477; Mature: 39477

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSFFVVPLVTMMKSAVSDPVATEALPRTARALSDWDRSGTPPATAQAALADDIRALRND
CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCC
EQFGDLVRRLNSAQSGFRSLLGKTRRALDGAGTVDLANIDSRWTETSYWVTIGEAVASPW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHEEEECHHHCCCC
TDKNLLAAVDLERNSAGNVAAMPEGASANRLIMIRTFVTSALVTLACILIGLPYAMVAAS
CCCCCEEEEEECCCCCCCEEECCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
VEGWRRQVLLGAVLLPLWTSLLVRTAAWYVVLQDNGLINATLRGLGLTSGPVPLMFNRLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCEEEHHHHHCCCCCCCHHHHHHHHH
VVIAMTHVLLPFMVLPIFSVLIAIPRNLMPAAASLGAHPLRAFLHVLLPLSMRGVVSGAL
HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
LVFMAALGYYITPALIGGANDQMISSVIAYYATGAANWGMAGALGLVLLVMTILLYAIYM
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
RLTVEEQRA
HHHHHHCCC
>Mature Secondary Structure
MLSFFVVPLVTMMKSAVSDPVATEALPRTARALSDWDRSGTPPATAQAALADDIRALRND
CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCC
EQFGDLVRRLNSAQSGFRSLLGKTRRALDGAGTVDLANIDSRWTETSYWVTIGEAVASPW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHEEEECHHHCCCC
TDKNLLAAVDLERNSAGNVAAMPEGASANRLIMIRTFVTSALVTLACILIGLPYAMVAAS
CCCCCEEEEEECCCCCCCEEECCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
VEGWRRQVLLGAVLLPLWTSLLVRTAAWYVVLQDNGLINATLRGLGLTSGPVPLMFNRLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCEEEHHHHHCCCCCCCHHHHHHHHH
VVIAMTHVLLPFMVLPIFSVLIAIPRNLMPAAASLGAHPLRAFLHVLLPLSMRGVVSGAL
HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
LVFMAALGYYITPALIGGANDQMISSVIAYYATGAANWGMAGALGLVLLVMTILLYAIYM
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
RLTVEEQRA
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; putrescine [Periplasm]; H2O [C]

Specific reaction: ATP + putrescine [Periplasm] + H2O = ADP + phosphate + putrescine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8416922; 8905232; 9278503 [H]