Definition Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession NC_009445
Length 7,456,587

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The map label for this gene is 146342975

Identifier: 146342975

GI number: 146342975

Start: 6383108

End: 6383659

Strand: Direct

Name: 146342975

Synonym: BRADO6158

Alternate gene names: NA

Gene position: 6383108-6383659 (Clockwise)

Preceding gene: 146342970

Following gene: 146342976

Centisome position: 85.6

GC content: 66.3

Gene sequence:

>552_bases
ATGATCCGGACCAAGGGGCTCGCGGGCCTAAAGACGCGCGATCTCGCCCAGGAGATCGGCGTCGCCAACGGCGCAGTCTA
CAATCTCGTCGCCGATGTCGACGAACTGGTGCTGATGGTCGGATCGCGCACCTTGGCCCGGCTCGACGCCGAGCTGTCGC
AAGCGGAGAGCGCGGGACCACCCGACTCGGAAGGCGCGCTGGTGCGCATCGCCATCGCTTATTGCGATTTCGCCGCTCAC
AATCTGGAGCTCTGGCGCGCCCTGTTCGAGCACCGCATGCCGCCGGAGAAGCCGCTGCCCGACTGGGCGATCGCCGACCA
GATGCATCTGTTCCGCCACATCCACCAGCCGCTCGCCGCGCTGTTTCCGCAGCGCTCGTTCGATGACATCAGCGTCACCG
CGCGCAGCCTGTTCTCCGCGGTCCACGGCATGGTCGCACTCGGTCTGGAGCAGAAGCTGATCGCGGTACCGCTCGCAGCC
TTGCGCCAGCAGATCGCAACCATGGTGCAGGCCATGGTGACGGGACTCGTGTCGGCGGCAAAGACCGCTTAG

Upstream 100 bases:

>100_bases
GAGAATTTTTGAGCGTCGCTCAATATTTTGGTTAATGATGTCTAAAACACTGGAACGACGCGCGAAACAGCGCGAGGCCC
TGATCGAGGCCGCTGAGCGG

Downstream 100 bases:

>100_bases
CCAGGCAAGATTGACACGGCTCTGCCATGCCGGACGCGAGCGGCGTCCGGCGCTCCCAACTATCAAATGAGATGACGTCT
CGGGGAGACGCCGCCTGATC

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Regulatory Protein TetR; Transcriptional Regulator TetR Family Protein; TetR-Family Transcriptional Regulator; Tetr Family Transcriptional Regulator

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MIRTKGLAGLKTRDLAQEIGVANGAVYNLVADVDELVLMVGSRTLARLDAELSQAESAGPPDSEGALVRIAIAYCDFAAH
NLELWRALFEHRMPPEKPLPDWAIADQMHLFRHIHQPLAALFPQRSFDDISVTARSLFSAVHGMVALGLEQKLIAVPLAA
LRQQIATMVQAMVTGLVSAAKTA

Sequences:

>Translated_183_residues
MIRTKGLAGLKTRDLAQEIGVANGAVYNLVADVDELVLMVGSRTLARLDAELSQAESAGPPDSEGALVRIAIAYCDFAAH
NLELWRALFEHRMPPEKPLPDWAIADQMHLFRHIHQPLAALFPQRSFDDISVTARSLFSAVHGMVALGLEQKLIAVPLAA
LRQQIATMVQAMVTGLVSAAKTA
>Mature_183_residues
MIRTKGLAGLKTRDLAQEIGVANGAVYNLVADVDELVLMVGSRTLARLDAELSQAESAGPPDSEGALVRIAIAYCDFAAH
NLELWRALFEHRMPPEKPLPDWAIADQMHLFRHIHQPLAALFPQRSFDDISVTARSLFSAVHGMVALGLEQKLIAVPLAA
LRQQIATMVQAMVTGLVSAAKTA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19802; Mature: 19802

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRTKGLAGLKTRDLAQEIGVANGAVYNLVADVDELVLMVGSRTLARLDAELSQAESAGP
CCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC
PDSEGALVRIAIAYCDFAAHNLELWRALFEHRMPPEKPLPDWAIADQMHLFRHIHQPLAA
CCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
LFPQRSFDDISVTARSLFSAVHGMVALGLEQKLIAVPLAALRQQIATMVQAMVTGLVSAA
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KTA
CCC
>Mature Secondary Structure
MIRTKGLAGLKTRDLAQEIGVANGAVYNLVADVDELVLMVGSRTLARLDAELSQAESAGP
CCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC
PDSEGALVRIAIAYCDFAAHNLELWRALFEHRMPPEKPLPDWAIADQMHLFRHIHQPLAA
CCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
LFPQRSFDDISVTARSLFSAVHGMVALGLEQKLIAVPLAALRQQIATMVQAMVTGLVSAA
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KTA
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA