| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is gltJ [H]
Identifier: 146342964
GI number: 146342964
Start: 6370548
End: 6371279
Strand: Reverse
Name: gltJ [H]
Synonym: BRADO6147
Alternate gene names: 146342964
Gene position: 6371279-6370548 (Counterclockwise)
Preceding gene: 146342965
Following gene: 146342963
Centisome position: 85.44
GC content: 64.21
Gene sequence:
>732_bases GTGAACTACACCTGGAACTGGCACATCTTCCTGGAGCCGAACCCGACCGGGGCCGGCACCTATTTCGACATGCTGCTGGC GGGGCTGAAGGTCACGATCGTGACCTCGCTGTCGGCCTGGTTGATCGCGCTGATCTTCGGCACGATCGTCGGCATCCTGC GCTCGCTGCCGTCGAAGCTCGCGGGCTGGATCGGCTTCCTCTACGTCGAATTCTTCCGCAACATGCCGCTGCTGGTGCAG CTGTTCCTGTGGTTCTTCGTGCTGCCGGAGCTGTTGCCGCGCGCCGCCGGCCTGTGGCTGAAGCAGATGCCGAATGCGCC GTTCTTTACAGCCGCGGTCGGCATCGGCCTGTTCATGTCGGCGCGCGTCGCGGTGCAGCTGGCGGCCGGTATCGGATCGC TGCCGCGCGGACAGAAGATGGCCGCGACCGCGCTGGGGCTGACCACCTTGCAGGTCTATCGCTATGTGCTGCTGCCAATG GCCTTCCGCATCATCCTGCCGCCGCTGACGTCGGAGTTCCTCAACACCGTCAAGAACAGCGCGGTGGCCATCACCATCGG CTTGATCGAGCTGACCGGCGCGGCGCGCGCGATGCAGGAATTCTCCTTCCAGGTGTTCGAGGCGTTCAGCGCGGCGACCC TGATGTATCTCGTCATCAACATCATCGTCGTGATCGGCATGCGCCTGCTGGAGCGCGCGGTGGCGATCCCTGGCTACATC ACGGGCAAATGA
Upstream 100 bases:
>100_bases TCGCTGCGCCCCTCCCCCTTGCGGGGAGTGGAGCGCAGCGTCGCTCGTGGCGACGTCCCGTGATCCGGCTAACGAGTCAG TTTTTCCTCAGGACAACCCC
Downstream 100 bases:
>100_bases GATGCTGGCCAATTTCGACTTCGACGTCATCCGCCGCTCGCTGAGCTACCTGTTCATCGACGGCATGACTTTCACGCTGA CGCTGACCGCGCTGTCGGCG
Product: glutamate/aspartate ABC transporter permease
Products: ADP; phosphate; L-glutamate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 243; Mature: 243
Protein sequence:
>243_residues MNYTWNWHIFLEPNPTGAGTYFDMLLAGLKVTIVTSLSAWLIALIFGTIVGILRSLPSKLAGWIGFLYVEFFRNMPLLVQ LFLWFFVLPELLPRAAGLWLKQMPNAPFFTAAVGIGLFMSARVAVQLAAGIGSLPRGQKMAATALGLTTLQVYRYVLLPM AFRIILPPLTSEFLNTVKNSAVAITIGLIELTGAARAMQEFSFQVFEAFSAATLMYLVINIIVVIGMRLLERAVAIPGYI TGK
Sequences:
>Translated_243_residues MNYTWNWHIFLEPNPTGAGTYFDMLLAGLKVTIVTSLSAWLIALIFGTIVGILRSLPSKLAGWIGFLYVEFFRNMPLLVQ LFLWFFVLPELLPRAAGLWLKQMPNAPFFTAAVGIGLFMSARVAVQLAAGIGSLPRGQKMAATALGLTTLQVYRYVLLPM AFRIILPPLTSEFLNTVKNSAVAITIGLIELTGAARAMQEFSFQVFEAFSAATLMYLVINIIVVIGMRLLERAVAIPGYI TGK >Mature_243_residues MNYTWNWHIFLEPNPTGAGTYFDMLLAGLKVTIVTSLSAWLIALIFGTIVGILRSLPSKLAGWIGFLYVEFFRNMPLLVQ LFLWFFVLPELLPRAAGLWLKQMPNAPFFTAAVGIGLFMSARVAVQLAAGIGSLPRGQKMAATALGLTTLQVYRYVLLPM AFRIILPPLTSEFLNTVKNSAVAITIGLIELTGAARAMQEFSFQVFEAFSAATLMYLVINIIVVIGMRLLERAVAIPGYI TGK
Specific function: Part of the binding-protein-dependent transport system for aspartate/glutamate; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0765
COG function: function code E; ABC-type amino acid transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786874, Length=246, Percent_Identity=49.1869918699187, Blast_Score=241, Evalue=3e-65, Organism=Escherichia coli, GI1788226, Length=199, Percent_Identity=32.1608040201005, Blast_Score=101, Evalue=5e-23, Organism=Escherichia coli, GI1787030, Length=213, Percent_Identity=29.1079812206573, Blast_Score=97, Evalue=8e-22, Organism=Escherichia coli, GI1787086, Length=215, Percent_Identity=29.3023255813954, Blast_Score=85, Evalue=4e-18, Organism=Escherichia coli, GI1786873, Length=212, Percent_Identity=29.2452830188679, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI48994930, Length=125, Percent_Identity=35.2, Blast_Score=75, Evalue=3e-15, Organism=Escherichia coli, GI1788645, Length=166, Percent_Identity=28.9156626506024, Blast_Score=74, Evalue=9e-15, Organism=Escherichia coli, GI87082239, Length=165, Percent_Identity=27.8787878787879, Blast_Score=65, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 26725; Mature: 26725
Theoretical pI: Translated: 10.33; Mature: 10.33
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYTWNWHIFLEPNPTGAGTYFDMLLAGLKVTIVTSLSAWLIALIFGTIVGILRSLPSKL CCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGWIGFLYVEFFRNMPLLVQLFLWFFVLPELLPRAAGLWLKQMPNAPFFTAAVGIGLFMS HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH ARVAVQLAAGIGSLPRGQKMAATALGLTTLQVYRYVLLPMAFRIILPPLTSEFLNTVKNS HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCC AVAITIGLIELTGAARAMQEFSFQVFEAFSAATLMYLVINIIVVIGMRLLERAVAIPGYI CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC TGK CCC >Mature Secondary Structure MNYTWNWHIFLEPNPTGAGTYFDMLLAGLKVTIVTSLSAWLIALIFGTIVGILRSLPSKL CCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGWIGFLYVEFFRNMPLLVQLFLWFFVLPELLPRAAGLWLKQMPNAPFFTAAVGIGLFMS HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH ARVAVQLAAGIGSLPRGQKMAATALGLTTLQVYRYVLLPMAFRIILPPLTSEFLNTVKNS HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCC AVAITIGLIELTGAARAMQEFSFQVFEAFSAATLMYLVINIIVVIGMRLLERAVAIPGYI CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC TGK CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamate [Periplasm]; H2O [C]
Specific reaction: ATP + L-glutamate [Periplasm] + H2O = ADP + phosphate + L-glutamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]