| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is gltK [H]
Identifier: 146342963
GI number: 146342963
Start: 6369854
End: 6370546
Strand: Reverse
Name: gltK [H]
Synonym: BRADO6146
Alternate gene names: 146342963
Gene position: 6370546-6369854 (Counterclockwise)
Preceding gene: 146342964
Following gene: 146342962
Centisome position: 85.44
GC content: 63.49
Gene sequence:
>693_bases ATGCTGGCCAATTTCGACTTCGACGTCATCCGCCGCTCGCTGAGCTACCTGTTCATCGACGGCATGACTTTCACGCTGAC GCTGACCGCGCTGTCGGCGTTCGGCGGTCTCGTGTTCGGCACCTTGATCGCGATGATGCGGCTGTCGGGCTATCGCGTGA TGGGCTGGATCGCCGGGCTCTATGTCGACTTCATGCGCTCGCTGCCGCTGGTGCTGGTGATCTTCTGGTTCTACTTCCTG GTCCCCTATATCGGGCAGTGGATCACCGGCTCGTCCAGGCCGATCAAGGTCGGCGCCTTCGCCTCGTCCTTGATCACCTT CATCATGTTCGAGGCGGCGTATTTCTCCGAGATCATGCGGGCCGGCATCCAGTCGATCTCGCGGGGACAGCCGGCCGCGG CCTCGGCGCTCGGCCTCACTTACGCGCAGACCATGCGCTACGTCGTGCTGCCGCAAGCGTTCCGCAACATGCTGCCGGTG CTGCTGACCCAGACAATCGTGCTGTTCCAGGACACCTCGCTGGTCTACGTGCTCTCGATCCCGGACTTCCTCGGCGCGGC GTCGAAGGTGGCGCAGCGCGACGGCCGGCTGGTCGAGATGTACCTGTTCGCCGCATTGGTCTACTTCACCATCTCCTGCA TCGCGTCCTACGGCGTCCGCCGCCTGCAGTCGCGCATCGCCATCATCAGGTAG
Upstream 100 bases:
>100_bases GCGACCCTGATGTATCTCGTCATCAACATCATCGTCGTGATCGGCATGCGCCTGCTGGAGCGCGCGGTGGCGATCCCTGG CTACATCACGGGCAAATGAG
Downstream 100 bases:
>100_bases TCGGCTCCCATGATCGAAATCAGCCACGTCAACAAATGGTACAGCCCGACCTTCCAGGTGCTGAAGGACTGCACCACGTC CGTCGCCAAGGGCGAGGTCG
Product: glutamate/aspartate ABC transporter permease
Products: ADP; phosphate; L-glutamate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 230; Mature: 230
Protein sequence:
>230_residues MLANFDFDVIRRSLSYLFIDGMTFTLTLTALSAFGGLVFGTLIAMMRLSGYRVMGWIAGLYVDFMRSLPLVLVIFWFYFL VPYIGQWITGSSRPIKVGAFASSLITFIMFEAAYFSEIMRAGIQSISRGQPAAASALGLTYAQTMRYVVLPQAFRNMLPV LLTQTIVLFQDTSLVYVLSIPDFLGAASKVAQRDGRLVEMYLFAALVYFTISCIASYGVRRLQSRIAIIR
Sequences:
>Translated_230_residues MLANFDFDVIRRSLSYLFIDGMTFTLTLTALSAFGGLVFGTLIAMMRLSGYRVMGWIAGLYVDFMRSLPLVLVIFWFYFL VPYIGQWITGSSRPIKVGAFASSLITFIMFEAAYFSEIMRAGIQSISRGQPAAASALGLTYAQTMRYVVLPQAFRNMLPV LLTQTIVLFQDTSLVYVLSIPDFLGAASKVAQRDGRLVEMYLFAALVYFTISCIASYGVRRLQSRIAIIR >Mature_230_residues MLANFDFDVIRRSLSYLFIDGMTFTLTLTALSAFGGLVFGTLIAMMRLSGYRVMGWIAGLYVDFMRSLPLVLVIFWFYFL VPYIGQWITGSSRPIKVGAFASSLITFIMFEAAYFSEIMRAGIQSISRGQPAAASALGLTYAQTMRYVVLPQAFRNMLPV LLTQTIVLFQDTSLVYVLSIPDFLGAASKVAQRDGRLVEMYLFAALVYFTISCIASYGVRRLQSRIAIIR
Specific function: Part of the binding-protein-dependent transport system for aspartate/glutamate; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0765
COG function: function code E; ABC-type amino acid transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786873, Length=224, Percent_Identity=53.125, Blast_Score=218, Evalue=3e-58, Organism=Escherichia coli, GI1788226, Length=204, Percent_Identity=35.2941176470588, Blast_Score=114, Evalue=4e-27, Organism=Escherichia coli, GI1787030, Length=226, Percent_Identity=30.5309734513274, Blast_Score=114, Evalue=6e-27, Organism=Escherichia coli, GI87082239, Length=211, Percent_Identity=30.8056872037915, Blast_Score=101, Evalue=5e-23, Organism=Escherichia coli, GI1786874, Length=198, Percent_Identity=28.7878787878788, Blast_Score=92, Evalue=2e-20, Organism=Escherichia coli, GI1787087, Length=230, Percent_Identity=27.3913043478261, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI48994930, Length=166, Percent_Identity=29.5180722891566, Blast_Score=74, Evalue=8e-15, Organism=Escherichia coli, GI1788645, Length=207, Percent_Identity=25.1207729468599, Blast_Score=62, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 25733; Mature: 25733
Theoretical pI: Translated: 10.06; Mature: 10.06
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLANFDFDVIRRSLSYLFIDGMTFTLTLTALSAFGGLVFGTLIAMMRLSGYRVMGWIAGL CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH YVDFMRSLPLVLVIFWFYFLVPYIGQWITGSSRPIKVGAFASSLITFIMFEAAYFSEIMR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHH AGIQSISRGQPAAASALGLTYAQTMRYVVLPQAFRNMLPVLLTQTIVLFQDTSLVYVLSI HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEEEC PDFLGAASKVAQRDGRLVEMYLFAALVYFTISCIASYGVRRLQSRIAIIR CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLANFDFDVIRRSLSYLFIDGMTFTLTLTALSAFGGLVFGTLIAMMRLSGYRVMGWIAGL CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH YVDFMRSLPLVLVIFWFYFLVPYIGQWITGSSRPIKVGAFASSLITFIMFEAAYFSEIMR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHH AGIQSISRGQPAAASALGLTYAQTMRYVVLPQAFRNMLPVLLTQTIVLFQDTSLVYVLSI HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEEEC PDFLGAASKVAQRDGRLVEMYLFAALVYFTISCIASYGVRRLQSRIAIIR CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamate [Periplasm]; H2O [C]
Specific reaction: ATP + L-glutamate [Periplasm] + H2O = ADP + phosphate + L-glutamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]