| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
Click here to switch to the map view.
The map label for this gene is 146342932
Identifier: 146342932
GI number: 146342932
Start: 6340142
End: 6340651
Strand: Reverse
Name: 146342932
Synonym: BRADO6113
Alternate gene names: NA
Gene position: 6340651-6340142 (Counterclockwise)
Preceding gene: 146342936
Following gene: 146342930
Centisome position: 85.03
GC content: 65.88
Gene sequence:
>510_bases ATGACGAGTTCACGGTGCGCGCGACCGATCGCCAATTTCGGTGTCGCGTCAGCGCTCACGATGCTTCTGGGAGCGTGCAC GGGCTTCAGCCTGTCGCCGTCGTCTCCCATGCAGCAGACCGAGGCGCCCATCGAGCCGGAGGTTCCGGCGACGATTCGGG CTGAGGATCTCGTGGGGAAGTGGGGCCTTGCCGCCTACAACAATCCCAATGACCGCGCCCGTACCGAGAAGATGGCGCTG GCGCAGTGCAAGCAGCCCTATACGATCGGCCAGGGACAATCCGGCGGCGTGATCATGCATCTGGCCGACCAGGCGACCCC GCAGGAACTGCGGCTGAAGGGCTCGGCCAGCGGCAAGAACTACATCGGTCCTGCGGGACCGCCGGCCGGCGAGCAGGATC GCGAGGTCATCTCGTTCGACGGACGGGTGCTGATCACCCGCTTCGTCGACAAGGATGCTGCCACCCGCTACCAGACCATG GTCTATGTCCGCTGCGGACCGCGCGCCTGA
Upstream 100 bases:
>100_bases TAGTGGAGCGGCGTCGTCAACCGACGTCGTTGCTCTGACGCGCGTTTTGCGCTTGGTTGCCGGGTGGGGCAGCCACGTTC TTGTTCCTTAAGGGGATGCC
Downstream 100 bases:
>100_bases GATCCGGGCGTATGTCGAGACGTGAGGACATCCATGAAAAACGCCGGCGGATCGCCGGCGTTTTTGTCGGGTGTGAAGGC GGATCGCCGCTCAGTTGAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 169; Mature: 168
Protein sequence:
>169_residues MTSSRCARPIANFGVASALTMLLGACTGFSLSPSSPMQQTEAPIEPEVPATIRAEDLVGKWGLAAYNNPNDRARTEKMAL AQCKQPYTIGQGQSGGVIMHLADQATPQELRLKGSASGKNYIGPAGPPAGEQDREVISFDGRVLITRFVDKDAATRYQTM VYVRCGPRA
Sequences:
>Translated_169_residues MTSSRCARPIANFGVASALTMLLGACTGFSLSPSSPMQQTEAPIEPEVPATIRAEDLVGKWGLAAYNNPNDRARTEKMAL AQCKQPYTIGQGQSGGVIMHLADQATPQELRLKGSASGKNYIGPAGPPAGEQDREVISFDGRVLITRFVDKDAATRYQTM VYVRCGPRA >Mature_168_residues TSSRCARPIANFGVASALTMLLGACTGFSLSPSSPMQQTEAPIEPEVPATIRAEDLVGKWGLAAYNNPNDRARTEKMALA QCKQPYTIGQGQSGGVIMHLADQATPQELRLKGSASGKNYIGPAGPPAGEQDREVISFDGRVLITRFVDKDAATRYQTMV YVRCGPRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18060; Mature: 17929
Theoretical pI: Translated: 8.63; Mature: 8.63
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSSRCARPIANFGVASALTMLLGACTGFSLSPSSPMQQTEAPIEPEVPATIRAEDLVGK CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCEEEHHHHHCC WGLAAYNNPNDRARTEKMALAQCKQPYTIGQGQSGGVIMHLADQATPQELRLKGSASGKN CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCHHHEEEECCCCCCC YIGPAGPPAGEQDREVISFDGRVLITRFVDKDAATRYQTMVYVRCGPRA CCCCCCCCCCCCCCEEEECCCEEEEEEECCCHHHCCEEEEEEEEECCCC >Mature Secondary Structure TSSRCARPIANFGVASALTMLLGACTGFSLSPSSPMQQTEAPIEPEVPATIRAEDLVGK CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCEEEHHHHHCC WGLAAYNNPNDRARTEKMALAQCKQPYTIGQGQSGGVIMHLADQATPQELRLKGSASGKN CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCHHHEEEECCCCCCC YIGPAGPPAGEQDREVISFDGRVLITRFVDKDAATRYQTMVYVRCGPRA CCCCCCCCCCCCCCEEEECCCEEEEEEECCCHHHCCEEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA