Click here to switch to the map view.

The map label for this gene is yhhT [H]

Identifier: 146342802

GI number: 146342802

Start: 6209631

End: 6211613

Strand: Reverse

Name: yhhT [H]

Synonym: BRADO5979

Alternate gene names: 146342802

Gene position: 6211613-6209631 (Counterclockwise)

Preceding gene: 146342803

Following gene: 146342796

Centisome position: 83.3

GC content: 64.85

Gene sequence:

>1983_bases
ATGATCAGCCGACAACCGCTCAAGGCCCGCACCACCGAGGAAGTCCTGGGGCTGATCAGCGCTCTGGCCGTCGCTTTATT
TGCTGTCATCATAATCGCGCTCCTCTATTTCGGCCGCGATATCCTCGTTCCGGTCGCCCTGGCCATCCTGCTCAGCTTCG
TGCTGGCGCCGCTGGTGGCGCAGCTGCAGCGGCTGCGCGCTCCGCGCGGGCTGGCTGTCGTCAGCGTGGTCTTTCTCGCC
TTCGTCCTGATTTTCGCTCTCGGCAGCTTGCTGGCCACGCAGCTCACCCAGCTCGCCAGCGAGTTGCCGAACTATCAATC
CACGATGAGCAACAAGATCCAGTCCTTCCGCGACACCAAAGCCGGTCGAGGGACACTCGAGCGTGCGTCGGACATGCTCA
GGGACCTCGGCAAGGAACTGGACAAGCCGAAGGAGCCGGAGGCACCTCGGCCGGCAGGCGGGCTAAGGGGGAATTCATCG
ACGCCTGTTGCTCCGATCCCCGTGGAAGTCCGCCAGCCCGATCCCGGAGCACTGGATAGTCTCCGAACGCTGATCTCGCC
GCTCATCCATCCCCTGGCGACGACCGGCATCATCATCATCTTCGTGATCTTCATCCTTCTTCAGCGCGAGGATCTCCGGA
ACAGACTCATTCGCCTCGCCGGCTCGTCCGACCTGCAGCGCACCACGGCGGCGCTCGATGACGCAGCCTACCGGCTGAGC
CGACTGTTCCTGACCCAACTTGCCCTGAACGGCGGCTTTGGCGTTGTGATCGGCCTGGGGTTATGGCTCATCGGCATTCC
CAGCGCCATTCTCTGGGGGATTCTCGCCGCGGCGCTGCGATTTGTCCCCTATATCGGCGCCGTCATCGCTGCAGCGTTTC
CGCTGGCACTGGCCGCGGCGGTCGATCCCGGCTGGACGATGCTGATCTGGACGCTGGCCTTGTTCGTCGTGGTGGAGCCG
CTGCTCGGCCACGTCATCGAACCCATGGTTTACGGGCGAAGCACCGGCCTGTCCCCGGTGGCCGTGGTCGTTTCCGCCGC
GTTCTGGACCGCGCTGTGGGGGCCCATCGGGCTGGTGCTCGCGACACCGCTGACGGTCTGCCTCGTCGTCATCGGGCGGC
ATGTGGAAAGTCTCGAATTCCTCGATGTGATGTTCGGAGATCGTCCGGCGCTGTCCCCGCCCGAGATCTTCTACCAGCGC
ATGCTCGCGAACGATCCGACGGAAGCGGCCGAGAAAGCCGAGGAGTTTTTGAAGGAGCGGTCGCTGATCGCGTATTGCGA
TGAGGTGGCGGTGAAGGGATTGCAACTGGCCCAAGCCGACGCCGATCGCGGCGCTCTCGCCTATGATCGTCTTGCAACGA
TCCGGGACGCGGTGGCGGAGTTGACCGTCGATCTCTCCGATCAGATTGACAGTCCGACGATGGTCGGCGAGGCGACCACC
GACCCGGAGGCGGCGTCAGCGATAGACGACACGGCGGGCAGCGGTGCGGTCGATGCGATCCCCATATTGAGCAAGGATCG
TCTAGCAGAGGGGTGGCAGAGTGAACGGCCACTGCTGTGCGTCGCGGGCCGAACCCCGATCGATGAAGCCGCAGCCGTGC
TTCTCGCGCAGCTGTTCTCGGCGCACGGTCTGGGAGCGAAGGTGTCCGGAGCCGAGGCGCTGTCCACCGCGAACGTCATC
AAGCTCGAGCCGGCAGGCGTCGCCATCGCGTGTCTGGTTTATCTCGGACAATCCGGCGTCGCACATATGCGCTACAGCGT
CCGACGCCTGAAGCGGCGGCTCCCGAGGGCCAAAGTGATGTTGGTCTGCTGCGCACCGGATGTCGACCAGGACGCCGCGA
AAGCCTTGCAGGAAGCCACCAAGGCCGACCTGGTCGCGGCCGGCATGGGCGAGGCCGTCAGGACGTGCGTGGAGGCGGCG
CAGGGGCAGACGTCTCCGCCGGTCCCATCGGCGCAATTGGATCCGAGGACGAACGTGGCGTGA

Upstream 100 bases:

>100_bases
TCTCCGCCGATGCCGGGCGGGCCGCGTTCGCCATCCCTCCACGGTTGCCTCAGCCCACGGCTTGGCGCGCTGCCCGTCCT
TGCTCGGAAAAGAGAGTTTG

Downstream 100 bases:

>100_bases
GACCTGGTGCAGGACGGGACAGTCCTGCTCATAGGAGACGACCGACCCAAAAAAACGCGGCCCCGGTCAGAGACGGCGAC
TGACGGGGACCGCTGACACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 660; Mature: 660

Protein sequence:

>660_residues
MISRQPLKARTTEEVLGLISALAVALFAVIIIALLYFGRDILVPVALAILLSFVLAPLVAQLQRLRAPRGLAVVSVVFLA
FVLIFALGSLLATQLTQLASELPNYQSTMSNKIQSFRDTKAGRGTLERASDMLRDLGKELDKPKEPEAPRPAGGLRGNSS
TPVAPIPVEVRQPDPGALDSLRTLISPLIHPLATTGIIIIFVIFILLQREDLRNRLIRLAGSSDLQRTTAALDDAAYRLS
RLFLTQLALNGGFGVVIGLGLWLIGIPSAILWGILAAALRFVPYIGAVIAAAFPLALAAAVDPGWTMLIWTLALFVVVEP
LLGHVIEPMVYGRSTGLSPVAVVVSAAFWTALWGPIGLVLATPLTVCLVVIGRHVESLEFLDVMFGDRPALSPPEIFYQR
MLANDPTEAAEKAEEFLKERSLIAYCDEVAVKGLQLAQADADRGALAYDRLATIRDAVAELTVDLSDQIDSPTMVGEATT
DPEAASAIDDTAGSGAVDAIPILSKDRLAEGWQSERPLLCVAGRTPIDEAAAVLLAQLFSAHGLGAKVSGAEALSTANVI
KLEPAGVAIACLVYLGQSGVAHMRYSVRRLKRRLPRAKVMLVCCAPDVDQDAAKALQEATKADLVAAGMGEAVRTCVEAA
QGQTSPPVPSAQLDPRTNVA

Sequences:

>Translated_660_residues
MISRQPLKARTTEEVLGLISALAVALFAVIIIALLYFGRDILVPVALAILLSFVLAPLVAQLQRLRAPRGLAVVSVVFLA
FVLIFALGSLLATQLTQLASELPNYQSTMSNKIQSFRDTKAGRGTLERASDMLRDLGKELDKPKEPEAPRPAGGLRGNSS
TPVAPIPVEVRQPDPGALDSLRTLISPLIHPLATTGIIIIFVIFILLQREDLRNRLIRLAGSSDLQRTTAALDDAAYRLS
RLFLTQLALNGGFGVVIGLGLWLIGIPSAILWGILAAALRFVPYIGAVIAAAFPLALAAAVDPGWTMLIWTLALFVVVEP
LLGHVIEPMVYGRSTGLSPVAVVVSAAFWTALWGPIGLVLATPLTVCLVVIGRHVESLEFLDVMFGDRPALSPPEIFYQR
MLANDPTEAAEKAEEFLKERSLIAYCDEVAVKGLQLAQADADRGALAYDRLATIRDAVAELTVDLSDQIDSPTMVGEATT
DPEAASAIDDTAGSGAVDAIPILSKDRLAEGWQSERPLLCVAGRTPIDEAAAVLLAQLFSAHGLGAKVSGAEALSTANVI
KLEPAGVAIACLVYLGQSGVAHMRYSVRRLKRRLPRAKVMLVCCAPDVDQDAAKALQEATKADLVAAGMGEAVRTCVEAA
QGQTSPPVPSAQLDPRTNVA
>Mature_660_residues
MISRQPLKARTTEEVLGLISALAVALFAVIIIALLYFGRDILVPVALAILLSFVLAPLVAQLQRLRAPRGLAVVSVVFLA
FVLIFALGSLLATQLTQLASELPNYQSTMSNKIQSFRDTKAGRGTLERASDMLRDLGKELDKPKEPEAPRPAGGLRGNSS
TPVAPIPVEVRQPDPGALDSLRTLISPLIHPLATTGIIIIFVIFILLQREDLRNRLIRLAGSSDLQRTTAALDDAAYRLS
RLFLTQLALNGGFGVVIGLGLWLIGIPSAILWGILAAALRFVPYIGAVIAAAFPLALAAAVDPGWTMLIWTLALFVVVEP
LLGHVIEPMVYGRSTGLSPVAVVVSAAFWTALWGPIGLVLATPLTVCLVVIGRHVESLEFLDVMFGDRPALSPPEIFYQR
MLANDPTEAAEKAEEFLKERSLIAYCDEVAVKGLQLAQADADRGALAYDRLATIRDAVAELTVDLSDQIDSPTMVGEATT
DPEAASAIDDTAGSGAVDAIPILSKDRLAEGWQSERPLLCVAGRTPIDEAAAVLLAQLFSAHGLGAKVSGAEALSTANVI
KLEPAGVAIACLVYLGQSGVAHMRYSVRRLKRRLPRAKVMLVCCAPDVDQDAAKALQEATKADLVAAGMGEAVRTCVEAA
QGQTSPPVPSAQLDPRTNVA

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI87082271, Length=340, Percent_Identity=28.2352941176471, Blast_Score=98, Evalue=2e-21,
Organism=Escherichia coli, GI1787885, Length=151, Percent_Identity=32.4503311258278, Blast_Score=74, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 70078; Mature: 70078

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISRQPLKARTTEEVLGLISALAVALFAVIIIALLYFGRDILVPVALAILLSFVLAPLVA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
QLQRLRAPRGLAVVSVVFLAFVLIFALGSLLATQLTQLASELPNYQSTMSNKIQSFRDTK
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
AGRGTLERASDMLRDLGKELDKPKEPEAPRPAGGLRGNSSTPVAPIPVEVRQPDPGALDS
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHH
LRTLISPLIHPLATTGIIIIFVIFILLQREDLRNRLIRLAGSSDLQRTTAALDDAAYRLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
RLFLTQLALNGGFGVVIGLGLWLIGIPSAILWGILAAALRFVPYIGAVIAAAFPLALAAA
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VDPGWTMLIWTLALFVVVEPLLGHVIEPMVYGRSTGLSPVAVVVSAAFWTALWGPIGLVL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
ATPLTVCLVVIGRHVESLEFLDVMFGDRPALSPPEIFYQRMLANDPTEAAEKAEEFLKER
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHH
SLIAYCDEVAVKGLQLAQADADRGALAYDRLATIRDAVAELTVDLSDQIDSPTMVGEATT
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
DPEAASAIDDTAGSGAVDAIPILSKDRLAEGWQSERPLLCVAGRTPIDEAAAVLLAQLFS
CCHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHH
AHGLGAKVSGAEALSTANVIKLEPAGVAIACLVYLGQSGVAHMRYSVRRLKRRLPRAKVM
HCCCCCCCCCHHHHHHCCEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEE
LVCCAPDVDQDAAKALQEATKADLVAAGMGEAVRTCVEAAQGQTSPPVPSAQLDPRTNVA
EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MISRQPLKARTTEEVLGLISALAVALFAVIIIALLYFGRDILVPVALAILLSFVLAPLVA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
QLQRLRAPRGLAVVSVVFLAFVLIFALGSLLATQLTQLASELPNYQSTMSNKIQSFRDTK
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
AGRGTLERASDMLRDLGKELDKPKEPEAPRPAGGLRGNSSTPVAPIPVEVRQPDPGALDS
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHH
LRTLISPLIHPLATTGIIIIFVIFILLQREDLRNRLIRLAGSSDLQRTTAALDDAAYRLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
RLFLTQLALNGGFGVVIGLGLWLIGIPSAILWGILAAALRFVPYIGAVIAAAFPLALAAA
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VDPGWTMLIWTLALFVVVEPLLGHVIEPMVYGRSTGLSPVAVVVSAAFWTALWGPIGLVL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
ATPLTVCLVVIGRHVESLEFLDVMFGDRPALSPPEIFYQRMLANDPTEAAEKAEEFLKER
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHH
SLIAYCDEVAVKGLQLAQADADRGALAYDRLATIRDAVAELTVDLSDQIDSPTMVGEATT
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
DPEAASAIDDTAGSGAVDAIPILSKDRLAEGWQSERPLLCVAGRTPIDEAAAVLLAQLFS
CCHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHH
AHGLGAKVSGAEALSTANVIKLEPAGVAIACLVYLGQSGVAHMRYSVRRLKRRLPRAKVM
HCCCCCCCCCHHHHHHCCEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEE
LVCCAPDVDQDAAKALQEATKADLVAAGMGEAVRTCVEAAQGQTSPPVPSAQLDPRTNVA
EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]