| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146342795
Identifier: 146342795
GI number: 146342795
Start: 6204059
End: 6204583
Strand: Reverse
Name: 146342795
Synonym: BRADO5972
Alternate gene names: NA
Gene position: 6204583-6204059 (Counterclockwise)
Preceding gene: 146342796
Following gene: 146342794
Centisome position: 83.21
GC content: 68.19
Gene sequence:
>525_bases ATGCGGCTGCTTGTGCTGTCGACCGTGGCGATGGTGATGATCATGCCGTTCGCGCAGGCCCATCAGGGCCGGCCGATGCG TGCCGGCGTGCTGGAATGCGAGGGGCGCCGCACCACCGGCAAGATCGTGATGTCGCAGGCCCGCCTGCGCTGCGTGTTCC GCAGCCAGGGCCGCGAGCCGGAGCGCTATGTCGCCAGGGTGCGCCGCTACGGGCTCGATCTCGGACTCACGGATGAGACG CGGATGGCCTGGGCGGTCAGCGCGCCCGTCAATGATTTCGGCCGCAGCGAGCTGCGCGGGCGCTATGGCGGTGTGTCCGC CAGTGCGGCCGCGATGTTCGGCTTCGGCGGCAGCTTCCTGTTGCGCGATTCCGACCGTGCGGCGGCCCTGCAGCCCATCA GTCTGCAGGGGCAGACCGGGCTCAATCTTGCGGCAGGGATCACCGAGGTGGAGCTGATGCCGCTGCTGCCGATTCATCCG AGCCCGAGCCAGCCTTCATCCTACTTCTCGCGCTATTATCGCTGA
Upstream 100 bases:
>100_bases AAACACCAGAAGCCCATATCCAGGCCGAAAGGCGCCATGTTTTGAACATGGCGCCTTTCTTCTGTCCGGAGTGAAGTTGG TTGCGTGGGGTTGGAGTTCG
Downstream 100 bases:
>100_bases GTACGGCGACAATGCCTCGCAGCAGCGGGGCCGTGGCTCGTTCAGCCTGATGAACGCGCGACGCTTCTGGTACGGCTGTA AGCCTTGTGGCATAGATGTG
Product: putative signal peptide
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 174; Mature: 174
Protein sequence:
>174_residues MRLLVLSTVAMVMIMPFAQAHQGRPMRAGVLECEGRRTTGKIVMSQARLRCVFRSQGREPERYVARVRRYGLDLGLTDET RMAWAVSAPVNDFGRSELRGRYGGVSASAAAMFGFGGSFLLRDSDRAAALQPISLQGQTGLNLAAGITEVELMPLLPIHP SPSQPSSYFSRYYR
Sequences:
>Translated_174_residues MRLLVLSTVAMVMIMPFAQAHQGRPMRAGVLECEGRRTTGKIVMSQARLRCVFRSQGREPERYVARVRRYGLDLGLTDET RMAWAVSAPVNDFGRSELRGRYGGVSASAAAMFGFGGSFLLRDSDRAAALQPISLQGQTGLNLAAGITEVELMPLLPIHP SPSQPSSYFSRYYR >Mature_174_residues MRLLVLSTVAMVMIMPFAQAHQGRPMRAGVLECEGRRTTGKIVMSQARLRCVFRSQGREPERYVARVRRYGLDLGLTDET RMAWAVSAPVNDFGRSELRGRYGGVSASAAAMFGFGGSFLLRDSDRAAALQPISLQGQTGLNLAAGITEVELMPLLPIHP SPSQPSSYFSRYYR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19172; Mature: 19172
Theoretical pI: Translated: 10.83; Mature: 10.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLLVLSTVAMVMIMPFAQAHQGRPMRAGVLECEGRRTTGKIVMSQARLRCVFRSQGREP CEEHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCH ERYVARVRRYGLDLGLTDETRMAWAVSAPVNDFGRSELRGRYGGVSASAAAMFGFGGSFL HHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCHHHHCCCCCCCCHHHHHHHCCCCEEE LRDSDRAAALQPISLQGQTGLNLAAGITEVELMPLLPIHPSPSQPSSYFSRYYR EECCCCCCEECCEEECCCCCCEECCCCCEEEEEEEECCCCCCCCCHHHHHHHCC >Mature Secondary Structure MRLLVLSTVAMVMIMPFAQAHQGRPMRAGVLECEGRRTTGKIVMSQARLRCVFRSQGREP CEEHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCH ERYVARVRRYGLDLGLTDETRMAWAVSAPVNDFGRSELRGRYGGVSASAAAMFGFGGSFL HHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCHHHHCCCCCCCCHHHHHHHCCCCEEE LRDSDRAAALQPISLQGQTGLNLAAGITEVELMPLLPIHPSPSQPSSYFSRYYR EECCCCCCEECCEEECCCCCCEECCCCCEEEEEEEECCCCCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA