Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is 146342777
Identifier: 146342777
GI number: 146342777
Start: 6175192
End: 6176043
Strand: Direct
Name: 146342777
Synonym: BRADO5952
Alternate gene names: NA
Gene position: 6175192-6176043 (Clockwise)
Preceding gene: 146342776
Following gene: 146342782
Centisome position: 82.82
GC content: 68.43
Gene sequence:
>852_bases ATGAGCCGGACGATCGACGCGCATCAGCACTTCTGGGACCCCGCGCGCGCCGACTATCCGTGGATGGCTGGCGACGCGTT GGCGCCGATCCGGCGTCCGTTCGGTCCCGCAGACCTCGCGCCGCTGCTCGCAGGCAATGGGCTTCAGGCGAGCATCCTGG TGCAGACCCGCTCGTCACTGGACGAAACGGAAGAGTTCCTGCGCACGGCGGCTGCGACACCCTTCATTGCCGGCGTCGTC GGCTGGGCGGACCTCACCGATTCCGCGATTGGCAGCACGCTCGTTAGGCTGCGCGGTCTGCCGGGCGGCGACAAGCTCGT CGGCATCCGCCATCAGGTGCATGACGAGGCCGATGCGGACTGGCTGTTGCGCAGCGATGTCCAGCATGGCCTCGCCGGCG TCATCGCGCACGAGCTCACCTACGATCTGCTGGTGCGGACGCGCGAGCTGCCGGCGGCGATCGCGACCGTTCGCGGATTT CCGCGCGGACGCTTCGTGCTCGACCACGCCGCCAAGCCGCCGATCGCAGCCGGCTTCGACCAGCTATGGGCCGATCGCAT CGCGGAGCTGGCCGCCAACAAGAACGTGTGGTGCAAGGTCTCCGGCCTTGCGACTGAAGCGACCTGGACGGATTGGGATG CCGAGCGGCTGCAGCCCTATGTGGCGCATGTCGCGCGCTGCTTCGGCGAGGACCGGCTGATCTTCGGTTCCGATTGGCCA GTCTGCCTGCTCGCCGGCAGCTACGGCGTGATCAAGCACGCGCTCGAGACGTGCCTGACGCAGCTCGGCCCCGGCATCCG AGACAAGGCTTTCGGCCCGAACGCGGTCGCGGCCTATCGGTTGCCGGGCTGA
Upstream 100 bases:
>100_bases ACATCGCCTTGGCGCAGGTCCCGATCCCCGCCGCCTTCTGGCGCGCGCTGCGCGACAGCAAGCTCATCGATGCGCGCGCG CCGCTGCCGGGAGATGCCGC
Downstream 100 bases:
>100_bases CGGACGTCAGAACCGCATCACCATGCCGAAATGGCTCTTGGCGAAGCCCAGCCGCTCGTAGAAGCGTTGCGCGTCGGTGC GGCTCTGATGCGTCATCAGC
Product: putative amidohydrolase (metal-dependent)
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 283; Mature: 282
Protein sequence:
>283_residues MSRTIDAHQHFWDPARADYPWMAGDALAPIRRPFGPADLAPLLAGNGLQASILVQTRSSLDETEEFLRTAAATPFIAGVV GWADLTDSAIGSTLVRLRGLPGGDKLVGIRHQVHDEADADWLLRSDVQHGLAGVIAHELTYDLLVRTRELPAAIATVRGF PRGRFVLDHAAKPPIAAGFDQLWADRIAELAANKNVWCKVSGLATEATWTDWDAERLQPYVAHVARCFGEDRLIFGSDWP VCLLAGSYGVIKHALETCLTQLGPGIRDKAFGPNAVAAYRLPG
Sequences:
>Translated_283_residues MSRTIDAHQHFWDPARADYPWMAGDALAPIRRPFGPADLAPLLAGNGLQASILVQTRSSLDETEEFLRTAAATPFIAGVV GWADLTDSAIGSTLVRLRGLPGGDKLVGIRHQVHDEADADWLLRSDVQHGLAGVIAHELTYDLLVRTRELPAAIATVRGF PRGRFVLDHAAKPPIAAGFDQLWADRIAELAANKNVWCKVSGLATEATWTDWDAERLQPYVAHVARCFGEDRLIFGSDWP VCLLAGSYGVIKHALETCLTQLGPGIRDKAFGPNAVAAYRLPG >Mature_282_residues SRTIDAHQHFWDPARADYPWMAGDALAPIRRPFGPADLAPLLAGNGLQASILVQTRSSLDETEEFLRTAAATPFIAGVVG WADLTDSAIGSTLVRLRGLPGGDKLVGIRHQVHDEADADWLLRSDVQHGLAGVIAHELTYDLLVRTRELPAAIATVRGFP RGRFVLDHAAKPPIAAGFDQLWADRIAELAANKNVWCKVSGLATEATWTDWDAERLQPYVAHVARCFGEDRLIFGSDWPV CLLAGSYGVIKHALETCLTQLGPGIRDKAFGPNAVAAYRLPG
Specific function: Unknown
COG id: COG3618
COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006992 [H]
Pfam domain/function: PF04909 Amidohydro_2 [H]
EC number: NA
Molecular weight: Translated: 30700; Mature: 30569
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRTIDAHQHFWDPARADYPWMAGDALAPIRRPFGPADLAPLLAGNGLQASILVQTRSSL CCCCCCHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHCCCCCEEEEEEHHHHHH DETEEFLRTAAATPFIAGVVGWADLTDSAIGSTLVRLRGLPGGDKLVGIRHQVHDEADAD HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHCCCCCHH WLLRSDVQHGLAGVIAHELTYDLLVRTRELPAAIATVRGFPRGRFVLDHAAKPPIAAGFD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCHHHHHH QLWADRIAELAANKNVWCKVSGLATEATWTDWDAERLQPYVAHVARCFGEDRLIFGSDWP HHHHHHHHHHHCCCCEEEEEECCEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEECCCCC VCLLAGSYGVIKHALETCLTQLGPGIRDKAFGPNAVAAYRLPG EEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCC >Mature Secondary Structure SRTIDAHQHFWDPARADYPWMAGDALAPIRRPFGPADLAPLLAGNGLQASILVQTRSSL CCCCCHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHCCCCCEEEEEEHHHHHH DETEEFLRTAAATPFIAGVVGWADLTDSAIGSTLVRLRGLPGGDKLVGIRHQVHDEADAD HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHCCCCCHH WLLRSDVQHGLAGVIAHELTYDLLVRTRELPAAIATVRGFPRGRFVLDHAAKPPIAAGFD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCHHHHHH QLWADRIAELAANKNVWCKVSGLATEATWTDWDAERLQPYVAHVARCFGEDRLIFGSDWP HHHHHHHHHHHCCCCEEEEEECCEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEECCCCC VCLLAGSYGVIKHALETCLTQLGPGIRDKAFGPNAVAAYRLPG EEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]