Definition Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession NC_009445
Length 7,456,587

Click here to switch to the map view.

The map label for this gene is 146342777

Identifier: 146342777

GI number: 146342777

Start: 6175192

End: 6176043

Strand: Direct

Name: 146342777

Synonym: BRADO5952

Alternate gene names: NA

Gene position: 6175192-6176043 (Clockwise)

Preceding gene: 146342776

Following gene: 146342782

Centisome position: 82.82

GC content: 68.43

Gene sequence:

>852_bases
ATGAGCCGGACGATCGACGCGCATCAGCACTTCTGGGACCCCGCGCGCGCCGACTATCCGTGGATGGCTGGCGACGCGTT
GGCGCCGATCCGGCGTCCGTTCGGTCCCGCAGACCTCGCGCCGCTGCTCGCAGGCAATGGGCTTCAGGCGAGCATCCTGG
TGCAGACCCGCTCGTCACTGGACGAAACGGAAGAGTTCCTGCGCACGGCGGCTGCGACACCCTTCATTGCCGGCGTCGTC
GGCTGGGCGGACCTCACCGATTCCGCGATTGGCAGCACGCTCGTTAGGCTGCGCGGTCTGCCGGGCGGCGACAAGCTCGT
CGGCATCCGCCATCAGGTGCATGACGAGGCCGATGCGGACTGGCTGTTGCGCAGCGATGTCCAGCATGGCCTCGCCGGCG
TCATCGCGCACGAGCTCACCTACGATCTGCTGGTGCGGACGCGCGAGCTGCCGGCGGCGATCGCGACCGTTCGCGGATTT
CCGCGCGGACGCTTCGTGCTCGACCACGCCGCCAAGCCGCCGATCGCAGCCGGCTTCGACCAGCTATGGGCCGATCGCAT
CGCGGAGCTGGCCGCCAACAAGAACGTGTGGTGCAAGGTCTCCGGCCTTGCGACTGAAGCGACCTGGACGGATTGGGATG
CCGAGCGGCTGCAGCCCTATGTGGCGCATGTCGCGCGCTGCTTCGGCGAGGACCGGCTGATCTTCGGTTCCGATTGGCCA
GTCTGCCTGCTCGCCGGCAGCTACGGCGTGATCAAGCACGCGCTCGAGACGTGCCTGACGCAGCTCGGCCCCGGCATCCG
AGACAAGGCTTTCGGCCCGAACGCGGTCGCGGCCTATCGGTTGCCGGGCTGA

Upstream 100 bases:

>100_bases
ACATCGCCTTGGCGCAGGTCCCGATCCCCGCCGCCTTCTGGCGCGCGCTGCGCGACAGCAAGCTCATCGATGCGCGCGCG
CCGCTGCCGGGAGATGCCGC

Downstream 100 bases:

>100_bases
CGGACGTCAGAACCGCATCACCATGCCGAAATGGCTCTTGGCGAAGCCCAGCCGCTCGTAGAAGCGTTGCGCGTCGGTGC
GGCTCTGATGCGTCATCAGC

Product: putative amidohydrolase (metal-dependent)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 282

Protein sequence:

>283_residues
MSRTIDAHQHFWDPARADYPWMAGDALAPIRRPFGPADLAPLLAGNGLQASILVQTRSSLDETEEFLRTAAATPFIAGVV
GWADLTDSAIGSTLVRLRGLPGGDKLVGIRHQVHDEADADWLLRSDVQHGLAGVIAHELTYDLLVRTRELPAAIATVRGF
PRGRFVLDHAAKPPIAAGFDQLWADRIAELAANKNVWCKVSGLATEATWTDWDAERLQPYVAHVARCFGEDRLIFGSDWP
VCLLAGSYGVIKHALETCLTQLGPGIRDKAFGPNAVAAYRLPG

Sequences:

>Translated_283_residues
MSRTIDAHQHFWDPARADYPWMAGDALAPIRRPFGPADLAPLLAGNGLQASILVQTRSSLDETEEFLRTAAATPFIAGVV
GWADLTDSAIGSTLVRLRGLPGGDKLVGIRHQVHDEADADWLLRSDVQHGLAGVIAHELTYDLLVRTRELPAAIATVRGF
PRGRFVLDHAAKPPIAAGFDQLWADRIAELAANKNVWCKVSGLATEATWTDWDAERLQPYVAHVARCFGEDRLIFGSDWP
VCLLAGSYGVIKHALETCLTQLGPGIRDKAFGPNAVAAYRLPG
>Mature_282_residues
SRTIDAHQHFWDPARADYPWMAGDALAPIRRPFGPADLAPLLAGNGLQASILVQTRSSLDETEEFLRTAAATPFIAGVVG
WADLTDSAIGSTLVRLRGLPGGDKLVGIRHQVHDEADADWLLRSDVQHGLAGVIAHELTYDLLVRTRELPAAIATVRGFP
RGRFVLDHAAKPPIAAGFDQLWADRIAELAANKNVWCKVSGLATEATWTDWDAERLQPYVAHVARCFGEDRLIFGSDWPV
CLLAGSYGVIKHALETCLTQLGPGIRDKAFGPNAVAAYRLPG

Specific function: Unknown

COG id: COG3618

COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006992 [H]

Pfam domain/function: PF04909 Amidohydro_2 [H]

EC number: NA

Molecular weight: Translated: 30700; Mature: 30569

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRTIDAHQHFWDPARADYPWMAGDALAPIRRPFGPADLAPLLAGNGLQASILVQTRSSL
CCCCCCHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHCCCCCEEEEEEHHHHHH
DETEEFLRTAAATPFIAGVVGWADLTDSAIGSTLVRLRGLPGGDKLVGIRHQVHDEADAD
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHCCCCCHH
WLLRSDVQHGLAGVIAHELTYDLLVRTRELPAAIATVRGFPRGRFVLDHAAKPPIAAGFD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCHHHHHH
QLWADRIAELAANKNVWCKVSGLATEATWTDWDAERLQPYVAHVARCFGEDRLIFGSDWP
HHHHHHHHHHHCCCCEEEEEECCEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEECCCCC
VCLLAGSYGVIKHALETCLTQLGPGIRDKAFGPNAVAAYRLPG
EEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCC
>Mature Secondary Structure 
SRTIDAHQHFWDPARADYPWMAGDALAPIRRPFGPADLAPLLAGNGLQASILVQTRSSL
CCCCCHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHCCCCCEEEEEEHHHHHH
DETEEFLRTAAATPFIAGVVGWADLTDSAIGSTLVRLRGLPGGDKLVGIRHQVHDEADAD
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHCCCCCHH
WLLRSDVQHGLAGVIAHELTYDLLVRTRELPAAIATVRGFPRGRFVLDHAAKPPIAAGFD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCHHHHHH
QLWADRIAELAANKNVWCKVSGLATEATWTDWDAERLQPYVAHVARCFGEDRLIFGSDWP
HHHHHHHHHHHCCCCEEEEEECCEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEECCCCC
VCLLAGSYGVIKHALETCLTQLGPGIRDKAFGPNAVAAYRLPG
EEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]