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The map label for this gene is 146342772

Identifier: 146342772

GI number: 146342772

Start: 6168871

End: 6170535

Strand: Reverse

Name: 146342772

Synonym: BRADO5947

Alternate gene names: NA

Gene position: 6170535-6168871 (Counterclockwise)

Preceding gene: 146342773

Following gene: 146342771

Centisome position: 82.75

GC content: 67.87

Gene sequence:

>1665_bases
ATGCGAAACAAGGGCGTGTTGGCCACGGCTGTCGTTGTCAGCGCCGCGCTGGCGGCTGGGCCGGGCGTTGCCGCGAATCT
CGATGCGACCTCCACCGTCGATGCTGTGACGGTCTATCCCGACGGCGCGACGGTCACGCGCGTGATCGCGCTCGACCTGC
CGGCCGGCGAGAGCACGGCCATCGCCAAGGATTTTCCGATCGGCTTTGATGCCGCCTCGCTGCGTGTCGAAGGCGAGGCT
GGCGCGAAGCTCGCCATCGGCACCGTTGATGCCAAGCCGCCGCGCGCAGCGCCGCCGGTCAACCTGCCCGAGATAGACTC
GCGCATCGAGGCGCTGCAGGACGAGCACGCCAATCTCGACGGCGCCATCGCTGCCGCCCAGGCGCGCAAGAAGTTCGCGG
AGCGATTTGCCGAGGCGTCGCCGGCAGGACTCGGCGAGAAGGGCGAGGCTCGGCCGATTGCGGAGTGGCGCAATGCATTT
GCGGCCGTGGCGGAGGAGATCGGCCAGGCCGATGCGGCGATCCGCGACGCCGAGCGCAAGCAGCGCGACATCGATCGCGA
GATCGCGCGGCTGCAGGCCGATCGCGCCGCCAAACCGCCGAGCAGGACGGAGGTTCAGATCGAGCTGTCGGCAGCGACAG
CGACCAAGGCGACATTGCGGGTGACCTATGCGGTCCGCAATGCCCGCTGGGTACCGCTCTATGACGCGCGCCTCGATACG
TCGGCAAAGGACCGTAAGCCGGCGATGGAGCTGGTGCGGCGCGCGGAGATCCAGCAGGCGACCGGCGAGGACTGGTCCGA
TGTCGCGCTCTCCGTTTCGACGGTGCGCACCGGCCGTGGCGGCAGCGCCCCCGAATTGCGGACGGTGATCGCGCAGTATC
CGCCGCCGCCGGCTCCGCCGATCGCACAATTCGGGACGTTGGCCGACAGGGCGCCGAGAATGCGGGCTATGGAGCAGCAG
GCAGCTCTCCCTGCTGCGCCGGAGGCGGCCAAACGAGCGGAGGAGCGCGAGACCGCGGTCGAGATCGGTGCCTATCAGAC
GGCTTTCCGCCTTCCCGGGCGTGTCAGCATCGCCACCGATGACGGCGCCAAGAGCCTGCGCATCTCGACGACGACGATCG
CGCCTGAGCTGATCATTCGCTCCGTGCCGGTCGCTGATCCCACGGCCTATCTGGAGGCCGGCTTCACGCAAGGAGACGAT
GCGCCGCTGCTGCCGGGCAAGGTCTCGATCTACCGTGACGGCATGTTCGTCGGCTCCAGCCGGCTGGCGACGGCGGGCAA
GGACGAGATGGTTCGCATCGGCTTCGGCGCCGACGACAAGGTCAAGGTCGAGCGCAGCGTGATCAAGCGCAACGAAGGCT
CGGCCGGTCTCATCGTAACCACGGCGAAAATCGACGAGCGCGCGTTCAAGACGACGGTTCGCAATGCGCACGATTTTCCG
GTCAAGGTCGCCATCCAGGATCAGCTTCCGGTCAGCGAGAATGAGGAAATCGTCGTCGAGATGCTGCCCGCGACCACGCC
GCCGACCGCGACCAATGTGCGCGAGCGGCGCGGTGTGACCGAGTGGGTCGTCGATGCGAAGCCCGGCGAGACGAAGGAGA
TCTCGTTCGCCTGGCGGGTCCGCTGGCCGAAGGACAAGGCCATCGTGATGCAGCCTTCGGGCTGA

Upstream 100 bases:

>100_bases
GTCTCAATTGAACCTGCCTTTGTTTGCTCGCGTCTAACGCCCGTTGAAGGGCCGGCTGATCCGGTCGCGAGGGCGCTGGG
CTGCGGAGAAAATGATGACC

Downstream 100 bases:

>100_bases
CGCGGCAGCTTCAGCTGTCGTGATGTTGCGAATCGTCAGGACGCTGTTCTGTGACCGCGTCCTGACGGCGCAGGAATCAG
GGTAAGAGCGAGCGACTGCC

Product: putative signal peptide

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 554; Mature: 554

Protein sequence:

>554_residues
MRNKGVLATAVVVSAALAAGPGVAANLDATSTVDAVTVYPDGATVTRVIALDLPAGESTAIAKDFPIGFDAASLRVEGEA
GAKLAIGTVDAKPPRAAPPVNLPEIDSRIEALQDEHANLDGAIAAAQARKKFAERFAEASPAGLGEKGEARPIAEWRNAF
AAVAEEIGQADAAIRDAERKQRDIDREIARLQADRAAKPPSRTEVQIELSAATATKATLRVTYAVRNARWVPLYDARLDT
SAKDRKPAMELVRRAEIQQATGEDWSDVALSVSTVRTGRGGSAPELRTVIAQYPPPPAPPIAQFGTLADRAPRMRAMEQQ
AALPAAPEAAKRAEERETAVEIGAYQTAFRLPGRVSIATDDGAKSLRISTTTIAPELIIRSVPVADPTAYLEAGFTQGDD
APLLPGKVSIYRDGMFVGSSRLATAGKDEMVRIGFGADDKVKVERSVIKRNEGSAGLIVTTAKIDERAFKTTVRNAHDFP
VKVAIQDQLPVSENEEIVVEMLPATTPPTATNVRERRGVTEWVVDAKPGETKEISFAWRVRWPKDKAIVMQPSG

Sequences:

>Translated_554_residues
MRNKGVLATAVVVSAALAAGPGVAANLDATSTVDAVTVYPDGATVTRVIALDLPAGESTAIAKDFPIGFDAASLRVEGEA
GAKLAIGTVDAKPPRAAPPVNLPEIDSRIEALQDEHANLDGAIAAAQARKKFAERFAEASPAGLGEKGEARPIAEWRNAF
AAVAEEIGQADAAIRDAERKQRDIDREIARLQADRAAKPPSRTEVQIELSAATATKATLRVTYAVRNARWVPLYDARLDT
SAKDRKPAMELVRRAEIQQATGEDWSDVALSVSTVRTGRGGSAPELRTVIAQYPPPPAPPIAQFGTLADRAPRMRAMEQQ
AALPAAPEAAKRAEERETAVEIGAYQTAFRLPGRVSIATDDGAKSLRISTTTIAPELIIRSVPVADPTAYLEAGFTQGDD
APLLPGKVSIYRDGMFVGSSRLATAGKDEMVRIGFGADDKVKVERSVIKRNEGSAGLIVTTAKIDERAFKTTVRNAHDFP
VKVAIQDQLPVSENEEIVVEMLPATTPPTATNVRERRGVTEWVVDAKPGETKEISFAWRVRWPKDKAIVMQPSG
>Mature_554_residues
MRNKGVLATAVVVSAALAAGPGVAANLDATSTVDAVTVYPDGATVTRVIALDLPAGESTAIAKDFPIGFDAASLRVEGEA
GAKLAIGTVDAKPPRAAPPVNLPEIDSRIEALQDEHANLDGAIAAAQARKKFAERFAEASPAGLGEKGEARPIAEWRNAF
AAVAEEIGQADAAIRDAERKQRDIDREIARLQADRAAKPPSRTEVQIELSAATATKATLRVTYAVRNARWVPLYDARLDT
SAKDRKPAMELVRRAEIQQATGEDWSDVALSVSTVRTGRGGSAPELRTVIAQYPPPPAPPIAQFGTLADRAPRMRAMEQQ
AALPAAPEAAKRAEERETAVEIGAYQTAFRLPGRVSIATDDGAKSLRISTTTIAPELIIRSVPVADPTAYLEAGFTQGDD
APLLPGKVSIYRDGMFVGSSRLATAGKDEMVRIGFGADDKVKVERSVIKRNEGSAGLIVTTAKIDERAFKTTVRNAHDFP
VKVAIQDQLPVSENEEIVVEMLPATTPPTATNVRERRGVTEWVVDAKPGETKEISFAWRVRWPKDKAIVMQPSG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Caenorhabditis elegans, GI17566996, Length=567, Percent_Identity=24.3386243386243, Blast_Score=128, Evalue=9e-30,
Organism=Caenorhabditis elegans, GI17566994, Length=563, Percent_Identity=25.3996447602131, Blast_Score=117, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI17566992, Length=533, Percent_Identity=24.953095684803, Blast_Score=101, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI115534513, Length=371, Percent_Identity=23.989218328841, Blast_Score=100, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI71988071, Length=549, Percent_Identity=24.2258652094718, Blast_Score=92, Evalue=5e-19,
Organism=Caenorhabditis elegans, GI71988077, Length=315, Percent_Identity=23.8095238095238, Blast_Score=68, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59103; Mature: 59103

Theoretical pI: Translated: 5.77; Mature: 5.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNKGVLATAVVVSAALAAGPGVAANLDATSTVDAVTVYPDGATVTRVIALDLPAGESTA
CCCCCHHHHHHHHHHHHHCCCCCEECCCCCCCCCEEEEECCCCCEEEEEEEECCCCCCCE
IAKDFPIGFDAASLRVEGEAGAKLAIGTVDAKPPRAAPPVNLPEIDSRIEALQDEHANLD
EEECCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC
GAIAAAQARKKFAERFAEASPAGLGEKGEARPIAEWRNAFAAVAEEIGQADAAIRDAERK
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QRDIDREIARLQADRAAKPPSRTEVQIELSAATATKATLRVTYAVRNARWVPLYDARLDT
HHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCEEEEEEEEEECCCEEEEEECCCCCC
SAKDRKPAMELVRRAEIQQATGEDWSDVALSVSTVRTGRGGSAPELRTVIAQYPPPPAPP
CCCCCHHHHHHHHHHHHHHHCCCCHHHHEEEEEEEECCCCCCCHHHHHHHHCCCCCCCCH
IAQFGTLADRAPRMRAMEQQAALPAAPEAAKRAEERETAVEIGAYQTAFRLPGRVSIATD
HHHHCCHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHCCCCEEEEEEC
DGAKSLRISTTTIAPELIIRSVPVADPTAYLEAGFTQGDDAPLLPGKVSIYRDGMFVGSS
CCCCEEEEEEHHHCHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCEEEEEECCEEECCC
RLATAGKDEMVRIGFGADDKVKVERSVIKRNEGSAGLIVTTAKIDERAFKTTVRNAHDFP
CCCCCCCCCEEEEECCCCCCCHHHHHHHHCCCCCCEEEEEEECHHHHHHHHHHCCCCCCC
VKVAIQDQLPVSENEEIVVEMLPATTPPTATNVRERRGVTEWVVDAKPGETKEISFAWRV
EEEEEECCCCCCCCCCEEEEEECCCCCCCCCCHHHHCCCCCEEEECCCCCCCEEEEEEEE
RWPKDKAIVMQPSG
ECCCCCEEEECCCC
>Mature Secondary Structure
MRNKGVLATAVVVSAALAAGPGVAANLDATSTVDAVTVYPDGATVTRVIALDLPAGESTA
CCCCCHHHHHHHHHHHHHCCCCCEECCCCCCCCCEEEEECCCCCEEEEEEEECCCCCCCE
IAKDFPIGFDAASLRVEGEAGAKLAIGTVDAKPPRAAPPVNLPEIDSRIEALQDEHANLD
EEECCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC
GAIAAAQARKKFAERFAEASPAGLGEKGEARPIAEWRNAFAAVAEEIGQADAAIRDAERK
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QRDIDREIARLQADRAAKPPSRTEVQIELSAATATKATLRVTYAVRNARWVPLYDARLDT
HHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCEEEEEEEEEECCCEEEEEECCCCCC
SAKDRKPAMELVRRAEIQQATGEDWSDVALSVSTVRTGRGGSAPELRTVIAQYPPPPAPP
CCCCCHHHHHHHHHHHHHHHCCCCHHHHEEEEEEEECCCCCCCHHHHHHHHCCCCCCCCH
IAQFGTLADRAPRMRAMEQQAALPAAPEAAKRAEERETAVEIGAYQTAFRLPGRVSIATD
HHHHCCHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHCCCCEEEEEEC
DGAKSLRISTTTIAPELIIRSVPVADPTAYLEAGFTQGDDAPLLPGKVSIYRDGMFVGSS
CCCCEEEEEEHHHCHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCEEEEEECCEEECCC
RLATAGKDEMVRIGFGADDKVKVERSVIKRNEGSAGLIVTTAKIDERAFKTTVRNAHDFP
CCCCCCCCCEEEEECCCCCCCHHHHHHHHCCCCCCEEEEEEECHHHHHHHHHHCCCCCCC
VKVAIQDQLPVSENEEIVVEMLPATTPPTATNVRERRGVTEWVVDAKPGETKEISFAWRV
EEEEEECCCCCCCCCCEEEEEECCCCCCCCCCHHHHCCCCCEEEECCCCCCCEEEEEEEE
RWPKDKAIVMQPSG
ECCCCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA