Definition Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession NC_009445
Length 7,456,587

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The map label for this gene is 146342771

Identifier: 146342771

GI number: 146342771

Start: 6166694

End: 6168283

Strand: Reverse

Name: 146342771

Synonym: BRADO5945

Alternate gene names: NA

Gene position: 6168283-6166694 (Counterclockwise)

Preceding gene: 146342772

Following gene: 146342770

Centisome position: 82.72

GC content: 66.86

Gene sequence:

>1590_bases
ATGATCTATCCGATGCAACACTCGTCCTTCGCCTCATGCCTCACGCGGCGTTCGTACCGCGTGACGGTTCTTGCCGCCGT
CATGCTGGCCGCAAGCGCCAGCGGGGCCTTGTCGGCCGATCATGTGAGCATGGTCCGGGAGCTCGCTGGCCGCGTGGGTC
CGATCCTCGGTTCGTCGCAGGCCTGCTCGAGCATTCCGCCGCGTCGCGTCCAGGCGATCCTCGGCAAGTTTCAGGAAGCG
ATCCGCGAGGCCTCGACCAATCCGAACGATCGCAACGAGCTCGCGCGGGAATTCGAACGAAACATCGCGGACGGCCGCGC
CGCGGTCAACGCCGGACGCGCCGATTGCCGGCTGGTGGAGCGCCAGCTCGCCGAACTCGAGCGCAGCGTCGGCGCGCCGC
CGCCGAGCACGCCGGCACCCGCGTCGCCTCCCGCGACCACCGGCGCGATCAGGCCGGCAGCAGCCGGCAATGTGCGCGGC
GTGACCGATCAGGAAATCCGCTTCGGCATGGTGATTCCCTACACCGGCAGCGCCAAGGAGAACGGGCAGAGCTACAAGCG
CGGCATCGAGGTCGCGTTCGCGCGGGCCAACGCCGCCGGCGGCGTCCACGGTCGCATGCTCAAGCTGATCGCCGCCGACG
ACGGTTTCGAGCCGGCGCGGACGCCGGACGCGATGAAGCTGTTATGGGACAAGGAGCAGGTGTTCGGCTTCGTCGGCAAT
CTCGGCACGCCGACCGCCGCGGTGGCCGTGCCGTTCGCGCTCGAGCGCCGCGCGCTGTTCTTCGCGCCGTTCACCGGCGG
CACCCTGGTGCGACGCGATCCGCCGGATCGCTATGTCTTCAACTACCGGCCGAGCTTCGTCGAGGAGGCCGATGCCGCGG
TGCGCTATCTGCTGAAGATGCGCAAGATCAGGCCGAACCAGATCGCGGTGTTCGGACAGAACGATGATCTCGGCGAGCAG
GGCTTCGCTGGTGTCGCCAGGGCCTACCGCGCAGCCGGCCTCAACGACAAGGCGATCGTACGCCTAGTCTATGCCCGCAA
CTCGATCGACATGGACGAGGCGGTGGCCCAGCTCAAGGCGCAGAAGGTGCCGATCAAGGCGATCGTGATGGTCGGGACGA
CGCGTCCGGCGGCGAAGTTCATCGAGAAGACGCGCGATCTGTATCCCGGCATGATCTACACCAACATGTCGATCGTCGGC
GCCACCGCGCTGGCGCAGGAATTGATGCTGCTGGGACCGCGCTTCACCGAGAACGTCATCGTGACGCAGGCCGTGCCCGC
CGTGTCGGGCTATTCGAGCACCGTGCTCGACTTCAAGGCGGCGCTTGCCGAGGTGGCTCCCGGCGAGGTGCCGGACTACA
TCTCGCTCGAAGGCTACATTGCCGCCAACCTGCTGATCGACGCGCTGAAGCGCTGCGGGCCGCAGCTCGACACCGAGCGC
CTGGTCGAGACATTGGAGAACACGCGCAATCTCGACATGGGGCTGGGCGCCTCGCTCAGCCTGAGCCGCGGCGATCATCA
GGCGCTGCACAAGCTCTGGGGCACACAGCTCGACAAGTCCGGATCGTATCAGCCCATCGATCTTGAATGA

Upstream 100 bases:

>100_bases
TCGTGACGATATCCGGATCACCGCACCGGCAGGCCCTATCGGCCGGCCTCACCCTTGCGTCCCGTCTGCGCGCATCGACC
GGCGGACAGGAACGGAGGTC

Downstream 100 bases:

>100_bases
CCCGCGTAGGACCATACCCGGCCGTGCCGAACCCGCGCCGGTGCATCGGCCAGACTTGATCCAGGACAAGCGCCCTGCGG
AGGGCGCTTGCTAAACGCTC

Product: putative extracellular ligand-binding receptor

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 529; Mature: 529

Protein sequence:

>529_residues
MIYPMQHSSFASCLTRRSYRVTVLAAVMLAASASGALSADHVSMVRELAGRVGPILGSSQACSSIPPRRVQAILGKFQEA
IREASTNPNDRNELAREFERNIADGRAAVNAGRADCRLVERQLAELERSVGAPPPSTPAPASPPATTGAIRPAAAGNVRG
VTDQEIRFGMVIPYTGSAKENGQSYKRGIEVAFARANAAGGVHGRMLKLIAADDGFEPARTPDAMKLLWDKEQVFGFVGN
LGTPTAAVAVPFALERRALFFAPFTGGTLVRRDPPDRYVFNYRPSFVEEADAAVRYLLKMRKIRPNQIAVFGQNDDLGEQ
GFAGVARAYRAAGLNDKAIVRLVYARNSIDMDEAVAQLKAQKVPIKAIVMVGTTRPAAKFIEKTRDLYPGMIYTNMSIVG
ATALAQELMLLGPRFTENVIVTQAVPAVSGYSSTVLDFKAALAEVAPGEVPDYISLEGYIAANLLIDALKRCGPQLDTER
LVETLENTRNLDMGLGASLSLSRGDHQALHKLWGTQLDKSGSYQPIDLE

Sequences:

>Translated_529_residues
MIYPMQHSSFASCLTRRSYRVTVLAAVMLAASASGALSADHVSMVRELAGRVGPILGSSQACSSIPPRRVQAILGKFQEA
IREASTNPNDRNELAREFERNIADGRAAVNAGRADCRLVERQLAELERSVGAPPPSTPAPASPPATTGAIRPAAAGNVRG
VTDQEIRFGMVIPYTGSAKENGQSYKRGIEVAFARANAAGGVHGRMLKLIAADDGFEPARTPDAMKLLWDKEQVFGFVGN
LGTPTAAVAVPFALERRALFFAPFTGGTLVRRDPPDRYVFNYRPSFVEEADAAVRYLLKMRKIRPNQIAVFGQNDDLGEQ
GFAGVARAYRAAGLNDKAIVRLVYARNSIDMDEAVAQLKAQKVPIKAIVMVGTTRPAAKFIEKTRDLYPGMIYTNMSIVG
ATALAQELMLLGPRFTENVIVTQAVPAVSGYSSTVLDFKAALAEVAPGEVPDYISLEGYIAANLLIDALKRCGPQLDTER
LVETLENTRNLDMGLGASLSLSRGDHQALHKLWGTQLDKSGSYQPIDLE
>Mature_529_residues
MIYPMQHSSFASCLTRRSYRVTVLAAVMLAASASGALSADHVSMVRELAGRVGPILGSSQACSSIPPRRVQAILGKFQEA
IREASTNPNDRNELAREFERNIADGRAAVNAGRADCRLVERQLAELERSVGAPPPSTPAPASPPATTGAIRPAAAGNVRG
VTDQEIRFGMVIPYTGSAKENGQSYKRGIEVAFARANAAGGVHGRMLKLIAADDGFEPARTPDAMKLLWDKEQVFGFVGN
LGTPTAAVAVPFALERRALFFAPFTGGTLVRRDPPDRYVFNYRPSFVEEADAAVRYLLKMRKIRPNQIAVFGQNDDLGEQ
GFAGVARAYRAAGLNDKAIVRLVYARNSIDMDEAVAQLKAQKVPIKAIVMVGTTRPAAKFIEKTRDLYPGMIYTNMSIVG
ATALAQELMLLGPRFTENVIVTQAVPAVSGYSSTVLDFKAALAEVAPGEVPDYISLEGYIAANLLIDALKRCGPQLDTER
LVETLENTRNLDMGLGASLSLSRGDHQALHKLWGTQLDKSGSYQPIDLE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57020; Mature: 57020

Theoretical pI: Translated: 9.16; Mature: 9.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIYPMQHSSFASCLTRRSYRVTVLAAVMLAASASGALSADHVSMVRELAGRVGPILGSSQ
CCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCH
ACSSIPPRRVQAILGKFQEAIREASTNPNDRNELAREFERNIADGRAAVNAGRADCRLVE
HHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHH
RQLAELERSVGAPPPSTPAPASPPATTGAIRPAAAGNVRGVTDQEIRFGMVIPYTGSAKE
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCC
NGQSYKRGIEVAFARANAAGGVHGRMLKLIAADDGFEPARTPDAMKLLWDKEQVFGFVGN
CCHHHHHHHHEEEEECCCCCCCHHHEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCC
LGTPTAAVAVPFALERRALFFAPFTGGTLVRRDPPDRYVFNYRPSFVEEADAAVRYLLKM
CCCCHHHHHHHHHHCCCEEEEECCCCCEEEECCCCCCEEEECCCHHHHHHHHHHHHHHHH
RKIRPNQIAVFGQNDDLGEQGFAGVARAYRAAGLNDKAIVRLVYARNSIDMDEAVAQLKA
HCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCHHHEEEEECCCCCCHHHHHHHHHH
QKVPIKAIVMVGTTRPAAKFIEKTRDLYPGMIYTNMSIVGATALAQELMLLGPRFTENVI
HCCCEEEEEEEECCCHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHCCCCCCCEE
VTQAVPAVSGYSSTVLDFKAALAEVAPGEVPDYISLEGYIAANLLIDALKRCGPQLDTER
EEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEECHHHHHHHHHHHHHHCCCCCCHHH
LVETLENTRNLDMGLGASLSLSRGDHQALHKLWGTQLDKSGSYQPIDLE
HHHHHHHHCCCCCCCCCCEECCCCHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIYPMQHSSFASCLTRRSYRVTVLAAVMLAASASGALSADHVSMVRELAGRVGPILGSSQ
CCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCH
ACSSIPPRRVQAILGKFQEAIREASTNPNDRNELAREFERNIADGRAAVNAGRADCRLVE
HHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHH
RQLAELERSVGAPPPSTPAPASPPATTGAIRPAAAGNVRGVTDQEIRFGMVIPYTGSAKE
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCC
NGQSYKRGIEVAFARANAAGGVHGRMLKLIAADDGFEPARTPDAMKLLWDKEQVFGFVGN
CCHHHHHHHHEEEEECCCCCCCHHHEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCC
LGTPTAAVAVPFALERRALFFAPFTGGTLVRRDPPDRYVFNYRPSFVEEADAAVRYLLKM
CCCCHHHHHHHHHHCCCEEEEECCCCCEEEECCCCCCEEEECCCHHHHHHHHHHHHHHHH
RKIRPNQIAVFGQNDDLGEQGFAGVARAYRAAGLNDKAIVRLVYARNSIDMDEAVAQLKA
HCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCHHHEEEEECCCCCCHHHHHHHHHH
QKVPIKAIVMVGTTRPAAKFIEKTRDLYPGMIYTNMSIVGATALAQELMLLGPRFTENVI
HCCCEEEEEEEECCCHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHCCCCCCCEE
VTQAVPAVSGYSSTVLDFKAALAEVAPGEVPDYISLEGYIAANLLIDALKRCGPQLDTER
EEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEECHHHHHHHHHHHHHHCCCCCCHHH
LVETLENTRNLDMGLGASLSLSRGDHQALHKLWGTQLDKSGSYQPIDLE
HHHHHHHHCCCCCCCCCCEECCCCHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA