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The map label for this gene is glxA [H]

Identifier: 146342710

GI number: 146342710

Start: 6096302

End: 6097291

Strand: Reverse

Name: glxA [H]

Synonym: BRADO5877

Alternate gene names: 146342710

Gene position: 6097291-6096302 (Counterclockwise)

Preceding gene: 146342715

Following gene: 146342709

Centisome position: 81.77

GC content: 66.67

Gene sequence:

>990_bases
TTGCGCATGTCCAAAAACGACATAAAACTATCCAGAAGCGACGACCCCCGCTCGCACCGGGTCGGCTTCCTGCTGATCCC
CGGTTTTGCGCTGATGTCCTATGCCTCGGCGGTCGAGCCGCTGCGCGCGGCGAATGTCCTCAGCGGCCGCACGCTCTATC
GCTGGCGCCATATCGCGATCCGAGGCACCGACATCCCGGCTTCCAACGGCGTCCGCATCCCCGCAGACGTCACGATCGGC
AGTGCGGCTCGTTTCGACTCGATCGTGGTCTGCGCCGGCGGCAATCCGGCGACGTTCTCACATCCGCCAACCCTCGCCTA
TTTGCGGAGCGCGGCCCGGCATGGCGTCCGGCTGATCGGCGTCTCGGCTGGCCCGTTCGTCCTCGCCCAGGCAGGCCTGC
TCGACAGCCATCGTTGCACGATCCATTGGGAGCATGTGCCGGCGTTCACCGAGACGTTTCCGGCCTTGTCGCCGAGCCGC
TCGCTGTTCGAGATTGATCGCGACCGCTTCACCTGCGCGGGCGGCATCGCGGCCCTCGACATGATGCATGCGATGATCCG
GATCGATCACGGCGCGCGGCTTGCAGCAGCTGTGAGCGACTGGTTTCTGCAGACTCAGGTCCGCCACGGCGAGGCCGCAC
AACGGCTGTCGCCGGCCGAACGCTTCGGCGTCCACCACCCCAAGCTGGTCGATACGCTGGTGCGGATGGAAAAGCGGATC
GAGCGGCCGCTGGCCGCGCCCGAACTGGCCCGGCTGGTCGGCCTCTCGCTGCGCCAGCTCGAGCGCCTGTTCGCGCATCA
TCTCGGGACAACCATCCATCGCCGCTATTTGCAGATCCGCCTGGAGCATGCCCGCAGGCTGCTCCGGCAGAGCACGATCG
CGATCGGCGAGGTCGCGCTTGCAACCGGGTTTGCGACGCCGATGCATTTCGCACGCTGTTACCGGCATCAGTTCGGCATG
ACTCCGCGCGAGGAGCGCCGCACGCGCTGA

Upstream 100 bases:

>100_bases
GCGGTGGCCGCGCAGCGCTTGGCGCGCGAGAGTGAACAGAGAGTAGCGCATGCGCGTCCGATCACGGGTTGTCCGTACGA
GATTGCGCTGATAAGTATCC

Downstream 100 bases:

>100_bases
TCACGCCGCCGCCGTCGACCACTATCCGCGCTGCCGGCTCGAACCGCTATTTGTTGGCGCGGTTGACGCCGAGCAAACAA
TCATCCTAGACAGAACCAGG

Product: bifunctional transcriptional regulator/glutamine amidotransferase-like domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 329; Mature: 329

Protein sequence:

>329_residues
MRMSKNDIKLSRSDDPRSHRVGFLLIPGFALMSYASAVEPLRAANVLSGRTLYRWRHIAIRGTDIPASNGVRIPADVTIG
SAARFDSIVVCAGGNPATFSHPPTLAYLRSAARHGVRLIGVSAGPFVLAQAGLLDSHRCTIHWEHVPAFTETFPALSPSR
SLFEIDRDRFTCAGGIAALDMMHAMIRIDHGARLAAAVSDWFLQTQVRHGEAAQRLSPAERFGVHHPKLVDTLVRMEKRI
ERPLAAPELARLVGLSLRQLERLFAHHLGTTIHRRYLQIRLEHARRLLRQSTIAIGEVALATGFATPMHFARCYRHQFGM
TPREERRTR

Sequences:

>Translated_329_residues
MRMSKNDIKLSRSDDPRSHRVGFLLIPGFALMSYASAVEPLRAANVLSGRTLYRWRHIAIRGTDIPASNGVRIPADVTIG
SAARFDSIVVCAGGNPATFSHPPTLAYLRSAARHGVRLIGVSAGPFVLAQAGLLDSHRCTIHWEHVPAFTETFPALSPSR
SLFEIDRDRFTCAGGIAALDMMHAMIRIDHGARLAAAVSDWFLQTQVRHGEAAQRLSPAERFGVHHPKLVDTLVRMEKRI
ERPLAAPELARLVGLSLRQLERLFAHHLGTTIHRRYLQIRLEHARRLLRQSTIAIGEVALATGFATPMHFARCYRHQFGM
TPREERRTR
>Mature_329_residues
MRMSKNDIKLSRSDDPRSHRVGFLLIPGFALMSYASAVEPLRAANVLSGRTLYRWRHIAIRGTDIPASNGVRIPADVTIG
SAARFDSIVVCAGGNPATFSHPPTLAYLRSAARHGVRLIGVSAGPFVLAQAGLLDSHRCTIHWEHVPAFTETFPALSPSR
SLFEIDRDRFTCAGGIAALDMMHAMIRIDHGARLAAAVSDWFLQTQVRHGEAAQRLSPAERFGVHHPKLVDTLVRMEKRI
ERPLAAPELARLVGLSLRQLERLFAHHLGTTIHRRYLQIRLEHARRLLRQSTIAIGEVALATGFATPMHFARCYRHQFGM
TPREERRTR

Specific function: Unknown

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 36712; Mature: 36712

Theoretical pI: Translated: 11.61; Mature: 11.61

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2 ; PS00639 THIOL_PROTEASE_HIS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRMSKNDIKLSRSDDPRSHRVGFLLIPGFALMSYASAVEPLRAANVLSGRTLYRWRHIAI
CCCCCCCCEECCCCCCHHHCEEEEEECHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEE
RGTDIPASNGVRIPADVTIGSAARFDSIVVCAGGNPATFSHPPTLAYLRSAARHGVRLIG
EECCCCCCCCEECCCCCEECCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCEEEEE
VSAGPFVLAQAGLLDSHRCTIHWEHVPAFTETFPALSPSRSLFEIDRDRFTCAGGIAALD
ECCCCHHHHHCCCCCCCEEEEEECCCCCHHHHCCCCCCCCHHHHHCCCCEEHHHHHHHHH
MMHAMIRIDHGARLAAAVSDWFLQTQVRHGEAAQRLSPAERFGVHHPKLVDTLVRMEKRI
HHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHCCCCHHHHHHHHHHHHHH
ERPLAAPELARLVGLSLRQLERLFAHHLGTTIHRRYLQIRLEHARRLLRQSTIAIGEVAL
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATGFATPMHFARCYRHQFGMTPREERRTR
HHCCCCHHHHHHHHHHHCCCCCCHHHCCC
>Mature Secondary Structure
MRMSKNDIKLSRSDDPRSHRVGFLLIPGFALMSYASAVEPLRAANVLSGRTLYRWRHIAI
CCCCCCCCEECCCCCCHHHCEEEEEECHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEE
RGTDIPASNGVRIPADVTIGSAARFDSIVVCAGGNPATFSHPPTLAYLRSAARHGVRLIG
EECCCCCCCCEECCCCCEECCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCEEEEE
VSAGPFVLAQAGLLDSHRCTIHWEHVPAFTETFPALSPSRSLFEIDRDRFTCAGGIAALD
ECCCCHHHHHCCCCCCCEEEEEECCCCCHHHHCCCCCCCCHHHHHCCCCEEHHHHHHHHH
MMHAMIRIDHGARLAAAVSDWFLQTQVRHGEAAQRLSPAERFGVHHPKLVDTLVRMEKRI
HHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHCCCCHHHHHHHHHHHHHH
ERPLAAPELARLVGLSLRQLERLFAHHLGTTIHRRYLQIRLEHARRLLRQSTIAIGEVAL
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATGFATPMHFARCYRHQFGMTPREERRTR
HHCCCCHHHHHHHHHHHCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]