| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is metX [H]
Identifier: 146342700
GI number: 146342700
Start: 6085504
End: 6086523
Strand: Reverse
Name: metX [H]
Synonym: BRADO5867
Alternate gene names: 146342700
Gene position: 6086523-6085504 (Counterclockwise)
Preceding gene: 146342701
Following gene: 146342699
Centisome position: 81.63
GC content: 62.55
Gene sequence:
>1020_bases GTGAGTCTCGATTACGACATCTACGATCTCGGCGACGTCAAGCTCCAGCGCGGCGCAACCCTGCGCGGCTGCAAGCTGGC CTACAAGACGTTCGGAACGCTGAACGCAGCGAAGGACAACGTCATCGTCTATCCGACCTGGTACTCCGGGCAGCACTACG ACAATGAATGGCTGATCGGCGCAGGCCGGGCGCTCGATCCGGCCAAGTATTTCATCATCATTCCCAACATGCTGGGCAAC GGGCTGTCGTCGTCGCCGAGCAACACGCCGGAGCCCTATAATGGGCCGCGGTTCCCGCAGGTCACCGCCTATGACAACGT GCGGGTTCAGCATCGTCTGGTGACTGAAAAGTTCGGCGTCTCGCACATTCGCCTCGTCACGGGCTGGTCGATGGGCGCGC TGCAGACGTTCCATTGGGGCGCACTCTATCCCGACATGATGGACCTGATCGCGCCGTTCTGCGGCTCGGCGAAATGCTCG CGGCACAACTTCGTGTTCCTCGAGGGCGTGAAGGCGGCGCTCACCGCTGACGCCGCGTGGAAGGAGGGCTGGTACACCGA CAAGCCGGCGCGCGGCCTTCGCGCCGCGGCACGCGTCTATGCCGGCTGGGGTTTCTCGCAGGCGTTCTATCGCGAGCAAC TCGATCTCAAGGCCATGGGCTACTCGTCGCTGGAGGACTTCCTGGTCGCGTTCTGGGAAGGCTTCTTCCTGCCGAAGGAT CCAAACAATCTGCTGACGATGCTGTGGACCTGGCAAAACGGCGATATCAGCGACAACGAGATCTACAAGGGTGATTTCAA GGCGGCGCTCGGCGCGATCAAGGCCAAGGCGTTCGTGATGCCGGGCCAGACCGATCTCTACTTCCCGCCGGAGGACAGTC AGTTCGAGGTCGCGCATATGCCGAACGCCGAGTTCATCCCGGTGCCGTCGATCTGGGGGCATTTCGCCGGCGGACCGGGC ACGAACCCGGCTGACGTCGACTTCATCGATGCCAAGCTCAAGGCGCTGCTCGCCTCGTGA
Upstream 100 bases:
>100_bases GTAGTGCCGTCCCTGCAAAATCGTGAAGCGCCATCTTCGGCGGCCACCGCGCGCGGTGACCGCCGAACCGTCATTGCAAT TCCAGAACAGGAGCATCATC
Downstream 100 bases:
>100_bases CGCATCGCGGTGGCGGCGCGGGCCGCCACCGCAGACACAGTGAGGGATCGATCGCATGTTACGAATCGAGCACGTCCTGG GTAGCCGCATCGATGCCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: Homoserine O-trans-acetylase; HTA; Homoserine transacetylase [H]
Number of amino acids: Translated: 339; Mature: 338
Protein sequence:
>339_residues MSLDYDIYDLGDVKLQRGATLRGCKLAYKTFGTLNAAKDNVIVYPTWYSGQHYDNEWLIGAGRALDPAKYFIIIPNMLGN GLSSSPSNTPEPYNGPRFPQVTAYDNVRVQHRLVTEKFGVSHIRLVTGWSMGALQTFHWGALYPDMMDLIAPFCGSAKCS RHNFVFLEGVKAALTADAAWKEGWYTDKPARGLRAAARVYAGWGFSQAFYREQLDLKAMGYSSLEDFLVAFWEGFFLPKD PNNLLTMLWTWQNGDISDNEIYKGDFKAALGAIKAKAFVMPGQTDLYFPPEDSQFEVAHMPNAEFIPVPSIWGHFAGGPG TNPADVDFIDAKLKALLAS
Sequences:
>Translated_339_residues MSLDYDIYDLGDVKLQRGATLRGCKLAYKTFGTLNAAKDNVIVYPTWYSGQHYDNEWLIGAGRALDPAKYFIIIPNMLGN GLSSSPSNTPEPYNGPRFPQVTAYDNVRVQHRLVTEKFGVSHIRLVTGWSMGALQTFHWGALYPDMMDLIAPFCGSAKCS RHNFVFLEGVKAALTADAAWKEGWYTDKPARGLRAAARVYAGWGFSQAFYREQLDLKAMGYSSLEDFLVAFWEGFFLPKD PNNLLTMLWTWQNGDISDNEIYKGDFKAALGAIKAKAFVMPGQTDLYFPPEDSQFEVAHMPNAEFIPVPSIWGHFAGGPG TNPADVDFIDAKLKALLAS >Mature_338_residues SLDYDIYDLGDVKLQRGATLRGCKLAYKTFGTLNAAKDNVIVYPTWYSGQHYDNEWLIGAGRALDPAKYFIIIPNMLGNG LSSSPSNTPEPYNGPRFPQVTAYDNVRVQHRLVTEKFGVSHIRLVTGWSMGALQTFHWGALYPDMMDLIAPFCGSAKCSR HNFVFLEGVKAALTADAAWKEGWYTDKPARGLRAAARVYAGWGFSQAFYREQLDLKAMGYSSLEDFLVAFWEGFFLPKDP NNLLTMLWTWQNGDISDNEIYKGDFKAALGAIKAKAFVMPGQTDLYFPPEDSQFEVAHMPNAEFIPVPSIWGHFAGGPGT NPADVDFIDAKLKALLAS
Specific function: Unknown
COG id: COG2021
COG function: function code E; Homoserine acetyltransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AB hydrolase superfamily. HTA family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6324052, Length=200, Percent_Identity=33, Blast_Score=96, Evalue=8e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR008220 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =2.3.1.31 [H]
Molecular weight: Translated: 37744; Mature: 37613
Theoretical pI: Translated: 6.16; Mature: 6.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLDYDIYDLGDVKLQRGATLRGCKLAYKTFGTLNAAKDNVIVYPTWYSGQHYDNEWLIG CCCCCCEEECCCEEEECCCCCCHHEEEEHHHCCCCCCCCCEEEEEEECCCCCCCCCEEEE AGRALDPAKYFIIIPNMLGNGLSSSPSNTPEPYNGPRFPQVTAYDNVRVQHRLVTEKFGV CCCCCCCCEEEEEECHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEHHHHHHHCCC SHIRLVTGWSMGALQTFHWGALYPDMMDLIAPFCGSAKCSRHNFVFLEGVKAALTADAAW CEEEEEECCCCCHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHCCHH KEGWYTDKPARGLRAAARVYAGWGFSQAFYREQLDLKAMGYSSLEDFLVAFWEGFFLPKD HCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCEECCCHHHHHHHHHHHHCCCCCCC PNNLLTMLWTWQNGDISDNEIYKGDFKAALGAIKAKAFVMPGQTDLYFPPEDSQFEVAHM CCCEEEEEEEECCCCCCCCCEECCHHHHHHHHHHHEEEECCCCCCEEECCCCCCEEEEEC PNAEFIPVPSIWGHFAGGPGTNPADVDFIDAKLKALLAS CCCCEEECCHHHHCCCCCCCCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure SLDYDIYDLGDVKLQRGATLRGCKLAYKTFGTLNAAKDNVIVYPTWYSGQHYDNEWLIG CCCCCEEECCCEEEECCCCCCHHEEEEHHHCCCCCCCCCEEEEEEECCCCCCCCCEEEE AGRALDPAKYFIIIPNMLGNGLSSSPSNTPEPYNGPRFPQVTAYDNVRVQHRLVTEKFGV CCCCCCCCEEEEEECHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEHHHHHHHCCC SHIRLVTGWSMGALQTFHWGALYPDMMDLIAPFCGSAKCSRHNFVFLEGVKAALTADAAW CEEEEEECCCCCHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHCCHH KEGWYTDKPARGLRAAARVYAGWGFSQAFYREQLDLKAMGYSSLEDFLVAFWEGFFLPKD HCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCEECCCHHHHHHHHHHHHCCCCCCC PNNLLTMLWTWQNGDISDNEIYKGDFKAALGAIKAKAFVMPGQTDLYFPPEDSQFEVAHM CCCEEEEEEEECCCCCCCCCEECCHHHHHHHHHHHEEEECCCCCCEEECCCCCCEEEEEC PNAEFIPVPSIWGHFAGGPGTNPADVDFIDAKLKALLAS CCCCEEECCHHHHCCCCCCCCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12093901 [H]