| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146342675
Identifier: 146342675
GI number: 146342675
Start: 6058673
End: 6059653
Strand: Direct
Name: 146342675
Synonym: BRADO5842
Alternate gene names: NA
Gene position: 6058673-6059653 (Clockwise)
Preceding gene: 146342674
Following gene: 146342678
Centisome position: 81.25
GC content: 67.28
Gene sequence:
>981_bases ATGGGGGAAGCGAACATGAGACTGGCGCGTGCACTGCTGTTCGGACTGCTGGTGGCGGCGGGCCTTGCCGTCACGCCGGC GATGGCCGCCTATCCTGACCGTCCGATCCGCTGGCTGGTCGGCTTCGCGCCCGGCGGCCCCGTCGACATCGTCGCCCGCA TCATGGCGCAATGGCTCTCCGAGCGTCTCGGCCAGCAGGTCGTGGTCGAGAACCGCACCGGCTCCGGCGGCAACATCGCC GCCGCGGCGATGATCAACTCGGCGCCCGACGGCTACACCCTGCTGTTCGTCGCGCCGAACAACGCGATCAGCACCTCGCT CTACAAGAAGCTGCCCTACGACTTCATCCGCGACACCGTGCCGGTCGCAAGCATCATGCAGCTCACCAACATGCTGGTGG TCAGCAACGACCTGCCGGCGAAGACGGTGAAGGAGTTCATCGACTACTGCCAGGCCAATCCCGGCAAGATCGCGTTCGCC TCCTCCGGCAACGGCACCTCGGTGCACATGGCCGCCGAGCTGTTCAAGGCGATGACCAAATGCGACATGCTGCACGTGCC CTATCGCGGCTCGGCGCTGGCCTTTCCCGACATCATCTCCAACAAGGTGCAGCTGATCTTCGACAACCTGCCGACCGCGC TGGAGCAGTCCCGCGGCGGCAGCGTCCGCGCGCTCGGCGTGACCTCGCCGCAGCGCTGGCCGACGGTGCCCGAGGTGCCG CCGATCGCCGAGACCGTGCCGGGCTACGAATCGGTCGGCTTCTACGGCATCTCGGCGCCGAAGGGCACGCCGCCCGAGAT CGTCGAGCTGCTCAACAAGGCGGTCGGCGAGGCGCTGAAGGATCCCAAGCTGGTGGCCCGGCTGACCGAGACCGGCGGCA TTCCGCGCGCGATGACGCCGGCGGAATTCGGCAAGCTCGTCGCCGACGAGACCGAGAAATGGCGCAAGGTGGTCGAATTC GCCGGGGTTTCGGTGGATTAG
Upstream 100 bases:
>100_bases CCGATCCGGCCTGTCCGCTGATCAAGAAGTAGTGCCTCACCGAAGTCAGGCGGCCTAGTCGAGCCGGGCCGCCTGACGTG GCCTGCGCGACAAGAAACAG
Downstream 100 bases:
>100_bases CGCGGCGGCCCGACGCCCCGCCCCGGTTCGGCCGCGGGCGCCGAGGATGGCGCTGCAAATCGATCCGGCGACGGCATTGC CGCAGAGCCGCAAGGGCTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 326; Mature: 325
Protein sequence:
>326_residues MGEANMRLARALLFGLLVAAGLAVTPAMAAYPDRPIRWLVGFAPGGPVDIVARIMAQWLSERLGQQVVVENRTGSGGNIA AAAMINSAPDGYTLLFVAPNNAISTSLYKKLPYDFIRDTVPVASIMQLTNMLVVSNDLPAKTVKEFIDYCQANPGKIAFA SSGNGTSVHMAAELFKAMTKCDMLHVPYRGSALAFPDIISNKVQLIFDNLPTALEQSRGGSVRALGVTSPQRWPTVPEVP PIAETVPGYESVGFYGISAPKGTPPEIVELLNKAVGEALKDPKLVARLTETGGIPRAMTPAEFGKLVADETEKWRKVVEF AGVSVD
Sequences:
>Translated_326_residues MGEANMRLARALLFGLLVAAGLAVTPAMAAYPDRPIRWLVGFAPGGPVDIVARIMAQWLSERLGQQVVVENRTGSGGNIA AAAMINSAPDGYTLLFVAPNNAISTSLYKKLPYDFIRDTVPVASIMQLTNMLVVSNDLPAKTVKEFIDYCQANPGKIAFA SSGNGTSVHMAAELFKAMTKCDMLHVPYRGSALAFPDIISNKVQLIFDNLPTALEQSRGGSVRALGVTSPQRWPTVPEVP PIAETVPGYESVGFYGISAPKGTPPEIVELLNKAVGEALKDPKLVARLTETGGIPRAMTPAEFGKLVADETEKWRKVVEF AGVSVD >Mature_325_residues GEANMRLARALLFGLLVAAGLAVTPAMAAYPDRPIRWLVGFAPGGPVDIVARIMAQWLSERLGQQVVVENRTGSGGNIAA AAMINSAPDGYTLLFVAPNNAISTSLYKKLPYDFIRDTVPVASIMQLTNMLVVSNDLPAKTVKEFIDYCQANPGKIAFAS SGNGTSVHMAAELFKAMTKCDMLHVPYRGSALAFPDIISNKVQLIFDNLPTALEQSRGGSVRALGVTSPQRWPTVPEVPP IAETVPGYESVGFYGISAPKGTPPEIVELLNKAVGEALKDPKLVARLTETGGIPRAMTPAEFGKLVADETEKWRKVVEFA GVSVD
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 34798; Mature: 34666
Theoretical pI: Translated: 7.41; Mature: 7.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGEANMRLARALLFGLLVAAGLAVTPAMAAYPDRPIRWLVGFAPGGPVDIVARIMAQWLS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHH ERLGQQVVVENRTGSGGNIAAAAMINSAPDGYTLLFVAPNNAISTSLYKKLPYDFIRDTV HHCCCEEEEECCCCCCCCEEEEEEECCCCCCEEEEEECCCCHHHHHHHHHCCHHHHHHHH PVASIMQLTNMLVVSNDLPAKTVKEFIDYCQANPGKIAFASSGNGTSVHMAAELFKAMTK HHHHHHHHHHHHEECCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHH CDMLHVPYRGSALAFPDIISNKVQLIFDNLPTALEQSRGGSVRALGVTSPQRWPTVPEVP HCEEECCCCCCCCCCHHHHCCHHHHHHHHCCHHHHHCCCCCEEEEECCCCCCCCCCCCCC PIAETVPGYESVGFYGISAPKGTPPEIVELLNKAVGEALKDPKLVARLTETGGIPRAMTP CHHHHCCCCHHCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCH AEFGKLVADETEKWRKVVEFAGVSVD HHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure GEANMRLARALLFGLLVAAGLAVTPAMAAYPDRPIRWLVGFAPGGPVDIVARIMAQWLS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHH ERLGQQVVVENRTGSGGNIAAAAMINSAPDGYTLLFVAPNNAISTSLYKKLPYDFIRDTV HHCCCEEEEECCCCCCCCEEEEEEECCCCCCEEEEEECCCCHHHHHHHHHCCHHHHHHHH PVASIMQLTNMLVVSNDLPAKTVKEFIDYCQANPGKIAFASSGNGTSVHMAAELFKAMTK HHHHHHHHHHHHEECCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHH CDMLHVPYRGSALAFPDIISNKVQLIFDNLPTALEQSRGGSVRALGVTSPQRWPTVPEVP HCEEECCCCCCCCCCHHHHCCHHHHHHHHCCHHHHHCCCCCEEEEECCCCCCCCCCCCCC PIAETVPGYESVGFYGISAPKGTPPEIVELLNKAVGEALKDPKLVARLTETGGIPRAMTP CHHHHCCCCHHCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCH AEFGKLVADETEKWRKVVEFAGVSVD HHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3299368 [H]