| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146342674
Identifier: 146342674
GI number: 146342674
Start: 6057357
End: 6058604
Strand: Direct
Name: 146342674
Synonym: BRADO5841
Alternate gene names: NA
Gene position: 6057357-6058604 (Clockwise)
Preceding gene: 146342673
Following gene: 146342675
Centisome position: 81.23
GC content: 64.66
Gene sequence:
>1248_bases GTGACAAGCATCGGCATCAGGCCGAGGGTGGAGGACGGATTGCAACTCAGCTCGTTGAAGCTCGCATGCGCCGCGGCGGC GCTGCTGGTCACCACGGCCGCGCAGGCCGAGATCTCCGACAATGTCGTCAAGATCGGCGTGCTCAGCGACATGAACGGCC CGGCTTCGACCCCGACCGGACAAGGCTCGGTCACCGCCGCGCAGATGGCGGTGGACGATTTCGGCGGCAAGGTGCTGGAC AAGCCGATCAGCGTGATCGTCGGCGACCATCAGCTCAAGCCCGATATCGGGGCTGCGATCGCGCGGCGCTGGTATGACAC CGAGCAGGTCGATCTCATCGTCGACGTGCCGGTTTCGGCGGTCGGCCTCGCTGTGCAGACGATTGCGACCGAGAAGAAGA AGCTGTTCATTACTCAGTCGACGGGCGCCGCCGATTTCCACGGCAAGTTCTGCTCGCCCTACGCCATGCAATGGGTGTTC GACACCAAGGCCCTCGCGACCGGTACGGCCAAGGAGGTCGTCAAGCGCGGCGGCGACAGCTGGTTCTTCATCACCGACGA CTACGCTTTCGGCCATTCGCTGGAGCGAGACGCCTCGAGCGTGGTCACCGCCAATGGCGCAAAGGTCGTCGGCGCCGTCA GGCCGCCCTTCGCGACGCCCGATCTCTCCTCCTTCATCCTGCAGGCGCAGGCCTCCAAGGCCAAGATCATCGGCATTGCC GCAGGCCCGCCCAACAACATGAACGAGATCAAGACGGCGGCCGAGTTCGGCCTGCTGAAGGGCGGCCAGCAGATGGCGGC GCTGCTCGCACTGATCACCGATATCCACTCGCTCGGCCTGCCGGCAGCGCAGGGACTGCTGCTCACGACGTCGTTCTACT GGGACATGGACGACAAGACGCGCGAATGGTCGAAGCGCTATTTCGCCAAGATGAACCGGATGCCGACGATGTGGCAGGCC GGCGTCTACTCCGCCGTCACGCATTATCTCAACGCGGTCAAGGCCGCGGGCAGCGACGATCCGCTCGCGGTCGCGGCGAA GATGCGCGAGACGCCGGTCGAGGACTTCTTCGCCCGCAACGGCAAGCTCCGCGCCGACAACCTGATGGTGCACGACCTCG TGCTGGCCCAGGTCAAGTCGCCGGAGGAGAGCAAGTATCCGTGGGACTACTATAAGATCCTCGCGACCATCAAAGGCGAG GACGCCTTCGGCCCGCCCGATCCGGCCTGTCCGCTGATCAAGAAGTAG
Upstream 100 bases:
>100_bases GGTGCTGCAGCGCACATGATCACTCCACCGCTGCGTGGCGTCACGCGATTGACGGCTGTCGCGGATTGATTGCAGATAGG CGGGAACGGCCGGCAGAGCC
Downstream 100 bases:
>100_bases TGCCTCACCGAAGTCAGGCGGCCTAGTCGAGCCGGGCCGCCTGACGTGGCCTGCGCGACAAGAAACAGATGGGGGAAGCG AACATGAGACTGGCGCGTGC
Product: putative branched-chain amino acid ABC transporter substrate-binding protein
Products: NA
Alternate protein names: UreA/Short-Chain Amide ABC Transporter; ABC-Type Transporter Periplasmic Component; Branched-Chain Amino Acid ABC Transporter; ABC-Type Transporter Periplasmic; Tat Pathway Signal Sequence Domain-Containing Protein; ABC Transporter; Tat Pathway Signal Sequence Domain Protein; Amino Acid ABC Transporter Periplasmic Protein; Inner-Membrane Translocator; ABC Transporter Periplasmic Protein
Number of amino acids: Translated: 415; Mature: 414
Protein sequence:
>415_residues MTSIGIRPRVEDGLQLSSLKLACAAAALLVTTAAQAEISDNVVKIGVLSDMNGPASTPTGQGSVTAAQMAVDDFGGKVLD KPISVIVGDHQLKPDIGAAIARRWYDTEQVDLIVDVPVSAVGLAVQTIATEKKKLFITQSTGAADFHGKFCSPYAMQWVF DTKALATGTAKEVVKRGGDSWFFITDDYAFGHSLERDASSVVTANGAKVVGAVRPPFATPDLSSFILQAQASKAKIIGIA AGPPNNMNEIKTAAEFGLLKGGQQMAALLALITDIHSLGLPAAQGLLLTTSFYWDMDDKTREWSKRYFAKMNRMPTMWQA GVYSAVTHYLNAVKAAGSDDPLAVAAKMRETPVEDFFARNGKLRADNLMVHDLVLAQVKSPEESKYPWDYYKILATIKGE DAFGPPDPACPLIKK
Sequences:
>Translated_415_residues MTSIGIRPRVEDGLQLSSLKLACAAAALLVTTAAQAEISDNVVKIGVLSDMNGPASTPTGQGSVTAAQMAVDDFGGKVLD KPISVIVGDHQLKPDIGAAIARRWYDTEQVDLIVDVPVSAVGLAVQTIATEKKKLFITQSTGAADFHGKFCSPYAMQWVF DTKALATGTAKEVVKRGGDSWFFITDDYAFGHSLERDASSVVTANGAKVVGAVRPPFATPDLSSFILQAQASKAKIIGIA AGPPNNMNEIKTAAEFGLLKGGQQMAALLALITDIHSLGLPAAQGLLLTTSFYWDMDDKTREWSKRYFAKMNRMPTMWQA GVYSAVTHYLNAVKAAGSDDPLAVAAKMRETPVEDFFARNGKLRADNLMVHDLVLAQVKSPEESKYPWDYYKILATIKGE DAFGPPDPACPLIKK >Mature_414_residues TSIGIRPRVEDGLQLSSLKLACAAAALLVTTAAQAEISDNVVKIGVLSDMNGPASTPTGQGSVTAAQMAVDDFGGKVLDK PISVIVGDHQLKPDIGAAIARRWYDTEQVDLIVDVPVSAVGLAVQTIATEKKKLFITQSTGAADFHGKFCSPYAMQWVFD TKALATGTAKEVVKRGGDSWFFITDDYAFGHSLERDASSVVTANGAKVVGAVRPPFATPDLSSFILQAQASKAKIIGIAA GPPNNMNEIKTAAEFGLLKGGQQMAALLALITDIHSLGLPAAQGLLLTTSFYWDMDDKTREWSKRYFAKMNRMPTMWQAG VYSAVTHYLNAVKAAGSDDPLAVAAKMRETPVEDFFARNGKLRADNLMVHDLVLAQVKSPEESKYPWDYYKILATIKGED AFGPPDPACPLIKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44485; Mature: 44354
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSIGIRPRVEDGLQLSSLKLACAAAALLVTTAAQAEISDNVVKIGVLSDMNGPASTPTG CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCC QGSVTAAQMAVDDFGGKVLDKPISVIVGDHQLKPDIGAAIARRWYDTEQVDLIVDVPVSA CCCEEHHHHHHHHHCCHHHCCCEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEECCHHH VGLAVQTIATEKKKLFITQSTGAADFHGKFCSPYAMQWVFDTKALATGTAKEVVKRGGDS HHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCHHHHEEECCHHHHCCCHHHHHHCCCCE WFFITDDYAFGHSLERDASSVVTANGAKVVGAVRPPFATPDLSSFILQAQASKAKIIGIA EEEEECCCCCCCCHHCCCHHEEECCCCEEEEECCCCCCCCCHHHHHHHHCCCCEEEEEEE AGPPNNMNEIKTAAEFGLLKGGQQMAALLALITDIHSLGLPAAQGLLLTTSFYWDMDDKT CCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHCCEEEEEEEEECCCCHH REWSKRYFAKMNRMPTMWQAGVYSAVTHYLNAVKAAGSDDPLAVAAKMRETPVEDFFARN HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHCC GKLRADNLMVHDLVLAQVKSPEESKYPWDYYKILATIKGEDAFGPPDPACPLIKK CCCCCCCCHHHHHHHHHHCCCCCCCCCHHHEEEEEEECCCCCCCCCCCCCCCCCC >Mature Secondary Structure TSIGIRPRVEDGLQLSSLKLACAAAALLVTTAAQAEISDNVVKIGVLSDMNGPASTPTG CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCC QGSVTAAQMAVDDFGGKVLDKPISVIVGDHQLKPDIGAAIARRWYDTEQVDLIVDVPVSA CCCEEHHHHHHHHHCCHHHCCCEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEECCHHH VGLAVQTIATEKKKLFITQSTGAADFHGKFCSPYAMQWVFDTKALATGTAKEVVKRGGDS HHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCHHHHEEECCHHHHCCCHHHHHHCCCCE WFFITDDYAFGHSLERDASSVVTANGAKVVGAVRPPFATPDLSSFILQAQASKAKIIGIA EEEEECCCCCCCCHHCCCHHEEECCCCEEEEECCCCCCCCCHHHHHHHHCCCCEEEEEEE AGPPNNMNEIKTAAEFGLLKGGQQMAALLALITDIHSLGLPAAQGLLLTTSFYWDMDDKT CCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHCCEEEEEEEEECCCCHH REWSKRYFAKMNRMPTMWQAGVYSAVTHYLNAVKAAGSDDPLAVAAKMRETPVEDFFARN HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHCC GKLRADNLMVHDLVLAQVKSPEESKYPWDYYKILATIKGEDAFGPPDPACPLIKK CCCCCCCCHHHHHHHHHHCCCCCCCCCHHHEEEEEEECCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA