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The map label for this gene is ctb [H]

Identifier: 146342626

GI number: 146342626

Start: 5993632

End: 5994066

Strand: Direct

Name: ctb [H]

Synonym: BRADO5791

Alternate gene names: 146342626

Gene position: 5993632-5994066 (Clockwise)

Preceding gene: 146342625

Following gene: 146342628

Centisome position: 80.38

GC content: 65.75

Gene sequence:

>435_bases
ATGCACAGCCCCGCGCCTCAGCCTGACCGTCATCCGCTCGCGGTTCAACATCCGGAACTCGACGACGCCGCGATCCGCCT
GCTGGTCGAGATGTTCTACGGGCGCGCGCGAGAGGACGCGTTGATCGGGCCGATCTTCAACCGCACTGTCGAGGACTGGG
ACGAGCATATCGGCCGGATCAGCGATTTCTGGTCGTCGATGGTCCTGAAGACCGGCCGTTACAGCGGCGCGCCGATGCGG
CCGCATCTGCTGCTCGACCTCCACGGCCCGCATTTCGACCGCTGGCTGCAGCTGTTCGAGGTGACGGCCAGGGATCTGTT
CCCGCCGGAGCTCGCCGAGCTCTTCATCATCCGCGCGCGGCGCATCGCCGACAGTTTCGAGATGGGTATCGCCAGCACGC
GCGGCGACATCGTCCAGCCACGTCATTCCGTCTGA

Upstream 100 bases:

>100_bases
CCTCATGGTGAGGAGCCCGCCGCAAGCGGGCGTCTCGAACCATGAGGCCCCGCGTGGCGCAGCATTTCATTTCGCGTTGT
GACCACTTATATACAGCGCC

Downstream 100 bases:

>100_bases
GGCCGCGCTCGATCCGCGGCCGCGCCAGCGCGATCAGTGCCGCGTCATCGATTGCGTGGTCATGTTGAAGATCGCCTCGG
AGAACGGAAACTCCAGCACG

Product: putative globin-like protein

Products: NA

Alternate protein names: Cj-trHbP; Truncated Hb [H]

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MHSPAPQPDRHPLAVQHPELDDAAIRLLVEMFYGRAREDALIGPIFNRTVEDWDEHIGRISDFWSSMVLKTGRYSGAPMR
PHLLLDLHGPHFDRWLQLFEVTARDLFPPELAELFIIRARRIADSFEMGIASTRGDIVQPRHSV

Sequences:

>Translated_144_residues
MHSPAPQPDRHPLAVQHPELDDAAIRLLVEMFYGRAREDALIGPIFNRTVEDWDEHIGRISDFWSSMVLKTGRYSGAPMR
PHLLLDLHGPHFDRWLQLFEVTARDLFPPELAELFIIRARRIADSFEMGIASTRGDIVQPRHSV
>Mature_144_residues
MHSPAPQPDRHPLAVQHPELDDAAIRLLVEMFYGRAREDALIGPIFNRTVEDWDEHIGRISDFWSSMVLKTGRYSGAPMR
PHLLLDLHGPHFDRWLQLFEVTARDLFPPELAELFIIRARRIADSFEMGIASTRGDIVQPRHSV

Specific function: Has been suggested to be involved in cytochrome c peroxidase or P450-like oxygen chemistry or cyanide detoxification. The high oxygen affinity of this protein suggests that it probably does not function as an oxygen transporter [H]

COG id: COG2346

COG function: function code R; Truncated hemoglobins

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the truncated hemoglobin family. Group III subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012292
- InterPro:   IPR009050
- InterPro:   IPR001486 [H]

Pfam domain/function: PF01152 Bac_globin [H]

EC number: NA

Molecular weight: Translated: 16573; Mature: 16573

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHSPAPQPDRHPLAVQHPELDDAAIRLLVEMFYGRAREDALIGPIFNRTVEDWDEHIGRI
CCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
SDFWSSMVLKTGRYSGAPMRPHLLLDLHGPHFDRWLQLFEVTARDLFPPELAELFIIRAR
HHHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
RIADSFEMGIASTRGDIVQPRHSV
HHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MHSPAPQPDRHPLAVQHPELDDAAIRLLVEMFYGRAREDALIGPIFNRTVEDWDEHIGRI
CCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
SDFWSSMVLKTGRYSGAPMRPHLLLDLHGPHFDRWLQLFEVTARDLFPPELAELFIIRAR
HHHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
RIADSFEMGIASTRGDIVQPRHSV
HHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10688204 [H]