| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is pgl [H]
Identifier: 146342625
GI number: 146342625
Start: 5992310
End: 5993413
Strand: Direct
Name: pgl [H]
Synonym: BRADO5790
Alternate gene names: 146342625
Gene position: 5992310-5993413 (Clockwise)
Preceding gene: 146342617
Following gene: 146342626
Centisome position: 80.36
GC content: 66.85
Gene sequence:
>1104_bases ATGATCAGATCGGGCACCATCATGGCCGCATCATTCGTCCTCGCAGCGGCAGCAACGCTGGCGCCGCGCCCGGGCCACGC CGAGACCTACGCCTATGTCGGCAATGCCGACGGCAACGACATCAGCGTCTTCAAGTTCGACGCTGCGACCGGCGAGATGA CCCCGGTGCAGACGGCCGCCTTCGTCGGCGTCGAGAAGCCGGGCTCGTCGACCCCGCTCGCGGTCAGCCCGGACAAGAAG GTCCTGATCTCAGGCGTGCGATCGCAGCCGTTCCAGGCCGAGAGCTTCGCCATCGACGCCAAGACCGGCCAGCTCAGCCA TATCGGCAACGGGCCGCTCGCCGACAGCATGGCCAACATCGCCTTCGATCGCACCGGCAAGGTGCTGTTCAGCGCCTCCT ATGGCGGCAACAAGGTGGCGGTAAATCCGGTGCAGGCGAACGGCGTCGTCGCAGCGCCCAGCCAGGTGATCCCGACCGGC CTGAACGCGCACGCCTTCCTGCCCTCGCCCGACAACCGCTTCGTGTTCGCGACCAATCTCGGCTCCGACCAGGTGCTCGG CTTCGCCTTCGATGCCGCCGCGGGCACGCTGACGGCCAACGAGGCGCTGACGGTGAAAACGCCGGAGAAGTCCGGGCCGC GCCACTTCATCTTCCACCCGAACGGCAAGTTCATCTATCTCCTGCACGAGCTCAACGCCGATCTCGCCGTCTATGCCTAT GACGCTGAGAAGGGCAGCTGGACCGAGCAGCAGCGCACCACCACCCTGCCTGCAGGCTTCACCGGCAAGCCCTGGGCGGC GGATCTTCATGCAACGCCTGATGGCCAATTCCTCTACGCCTCCGAGCGCGGCTCCAACACCCTGGCCGCGTTCAAGATCG ATGCGGCCAGCGGGCGGCTGACGCTGATCGGCAGCGTGCCGACCGAGACCCAGCCGCGCGGCTTCGCCATCGATCCGGCG GGGCGCTATCTCGCCGCCGTCGGCGAGGTGTCGAACGGCATGACGGTGTACAAGATCGACGCCGCGAGCGGGGCGCTGGA GAAGGTGAAGTCCTTCGCCGTCGGCAAGAAGCCGAACTGGGTCGAGTTCGTCACCCTGCCGTGA
Upstream 100 bases:
>100_bases AATACCCATCCCGCATCGATCGATCCGGAAACAGGCTTGGCCAAGCCTCGCAAACGACTTTAAGACCTCAACCAACAACA TCACCAGAGGGGGAAACCAC
Downstream 100 bases:
>100_bases GCTGCTGGGAGAGACCGGACCTTGCGGCATCCTTCGAGACGCGCGCCCGAGGGCGCGCTCCTCAGGATGAGGCCTGAGGG TGCGGCGAGATCTGCTCACC
Product: hypothetical protein
Products: NA
Alternate protein names: 6-P-gluconolactonase [H]
Number of amino acids: Translated: 367; Mature: 367
Protein sequence:
>367_residues MIRSGTIMAASFVLAAAATLAPRPGHAETYAYVGNADGNDISVFKFDAATGEMTPVQTAAFVGVEKPGSSTPLAVSPDKK VLISGVRSQPFQAESFAIDAKTGQLSHIGNGPLADSMANIAFDRTGKVLFSASYGGNKVAVNPVQANGVVAAPSQVIPTG LNAHAFLPSPDNRFVFATNLGSDQVLGFAFDAAAGTLTANEALTVKTPEKSGPRHFIFHPNGKFIYLLHELNADLAVYAY DAEKGSWTEQQRTTTLPAGFTGKPWAADLHATPDGQFLYASERGSNTLAAFKIDAASGRLTLIGSVPTETQPRGFAIDPA GRYLAAVGEVSNGMTVYKIDAASGALEKVKSFAVGKKPNWVEFVTLP
Sequences:
>Translated_367_residues MIRSGTIMAASFVLAAAATLAPRPGHAETYAYVGNADGNDISVFKFDAATGEMTPVQTAAFVGVEKPGSSTPLAVSPDKK VLISGVRSQPFQAESFAIDAKTGQLSHIGNGPLADSMANIAFDRTGKVLFSASYGGNKVAVNPVQANGVVAAPSQVIPTG LNAHAFLPSPDNRFVFATNLGSDQVLGFAFDAAAGTLTANEALTVKTPEKSGPRHFIFHPNGKFIYLLHELNADLAVYAY DAEKGSWTEQQRTTTLPAGFTGKPWAADLHATPDGQFLYASERGSNTLAAFKIDAASGRLTLIGSVPTETQPRGFAIDPA GRYLAAVGEVSNGMTVYKIDAASGALEKVKSFAVGKKPNWVEFVTLP >Mature_367_residues MIRSGTIMAASFVLAAAATLAPRPGHAETYAYVGNADGNDISVFKFDAATGEMTPVQTAAFVGVEKPGSSTPLAVSPDKK VLISGVRSQPFQAESFAIDAKTGQLSHIGNGPLADSMANIAFDRTGKVLFSASYGGNKVAVNPVQANGVVAAPSQVIPTG LNAHAFLPSPDNRFVFATNLGSDQVLGFAFDAAAGTLTANEALTVKTPEKSGPRHFIFHPNGKFIYLLHELNADLAVYAY DAEKGSWTEQQRTTTLPAGFTGKPWAADLHATPDGQFLYASERGSNTLAAFKIDAASGRLTLIGSVPTETQPRGFAIDPA GRYLAAVGEVSNGMTVYKIDAASGALEKVKSFAVGKKPNWVEFVTLP
Specific function: Catalyzes the hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate [H]
COG id: COG2706
COG function: function code G; 3-carboxymuconate cyclase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cycloisomerase 2 family [H]
Homologues:
Organism=Escherichia coli, GI1786983, Length=331, Percent_Identity=33.2326283987915, Blast_Score=189, Evalue=2e-49,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022528 - InterPro: IPR019405 - InterPro: IPR011045 - InterPro: IPR015943 [H]
Pfam domain/function: PF10282 DUF2394 [H]
EC number: =3.1.1.31 [H]
Molecular weight: Translated: 38384; Mature: 38384
Theoretical pI: Translated: 6.90; Mature: 6.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRSGTIMAASFVLAAAATLAPRPGHAETYAYVGNADGNDISVFKFDAATGEMTPVQTAA CCCCCEEHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCEEE FVGVEKPGSSTPLAVSPDKKVLISGVRSQPFQAESFAIDAKTGQLSHIGNGPLADSMANI EEEECCCCCCCCEEECCCCEEEEECCCCCCCCCCEEEEECCCCCEEECCCCCCHHHHHHH AFDRTGKVLFSASYGGNKVAVNPVQANGVVAAPSQVIPTGLNAHAFLPSPDNRFVFATNL EECCCCCEEEEECCCCCEEEEEEEECCCEEECCCHHCCCCCCCEEECCCCCCCEEEEECC GSDQVLGFAFDAAAGTLTANEALTVKTPEKSGPRHFIFHPNGKFIYLLHELNADLAVYAY CCCCEEEEEEECCCCEEECCCEEEEECCCCCCCEEEEECCCCCEEEEEEECCCCEEEEEE DAEKGSWTEQQRTTTLPAGFTGKPWAADLHATPDGQFLYASERGSNTLAAFKIDAASGRL ECCCCCCCCHHCEEECCCCCCCCCCEEEEECCCCCCEEEEECCCCCEEEEEEEECCCCCE TLIGSVPTETQPRGFAIDPAGRYLAAVGEVSNGMTVYKIDAASGALEKVKSFAVGKKPNW EEEECCCCCCCCCCEEECCCCCEEEEEECCCCCEEEEEEECCCCHHHHHHHHHCCCCCCE VEFVTLP EEEEECC >Mature Secondary Structure MIRSGTIMAASFVLAAAATLAPRPGHAETYAYVGNADGNDISVFKFDAATGEMTPVQTAA CCCCCEEHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCEEE FVGVEKPGSSTPLAVSPDKKVLISGVRSQPFQAESFAIDAKTGQLSHIGNGPLADSMANI EEEECCCCCCCCEEECCCCEEEEECCCCCCCCCCEEEEECCCCCEEECCCCCCHHHHHHH AFDRTGKVLFSASYGGNKVAVNPVQANGVVAAPSQVIPTGLNAHAFLPSPDNRFVFATNL EECCCCCEEEEECCCCCEEEEEEEECCCEEECCCHHCCCCCCCEEECCCCCCCEEEEECC GSDQVLGFAFDAAAGTLTANEALTVKTPEKSGPRHFIFHPNGKFIYLLHELNADLAVYAY CCCCEEEEEEECCCCEEECCCEEEEECCCCCCCEEEEECCCCCEEEEEEECCCCEEEEEE DAEKGSWTEQQRTTTLPAGFTGKPWAADLHATPDGQFLYASERGSNTLAAFKIDAASGRL ECCCCCCCCHHCEEECCCCCCCCCCEEEEECCCCCCEEEEECCCCCEEEEEEEECCCCCE TLIGSVPTETQPRGFAIDPAGRYLAAVGEVSNGMTVYKIDAASGALEKVKSFAVGKKPNW EEEECCCCCCCCCCEEECCCCCEEEEEECCCCCEEEEEEECCCCHHHHHHHHHCCCCCCE VEFVTLP EEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA