Definition Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession NC_009445
Length 7,456,587

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The map label for this gene is pgl [H]

Identifier: 146342625

GI number: 146342625

Start: 5992310

End: 5993413

Strand: Direct

Name: pgl [H]

Synonym: BRADO5790

Alternate gene names: 146342625

Gene position: 5992310-5993413 (Clockwise)

Preceding gene: 146342617

Following gene: 146342626

Centisome position: 80.36

GC content: 66.85

Gene sequence:

>1104_bases
ATGATCAGATCGGGCACCATCATGGCCGCATCATTCGTCCTCGCAGCGGCAGCAACGCTGGCGCCGCGCCCGGGCCACGC
CGAGACCTACGCCTATGTCGGCAATGCCGACGGCAACGACATCAGCGTCTTCAAGTTCGACGCTGCGACCGGCGAGATGA
CCCCGGTGCAGACGGCCGCCTTCGTCGGCGTCGAGAAGCCGGGCTCGTCGACCCCGCTCGCGGTCAGCCCGGACAAGAAG
GTCCTGATCTCAGGCGTGCGATCGCAGCCGTTCCAGGCCGAGAGCTTCGCCATCGACGCCAAGACCGGCCAGCTCAGCCA
TATCGGCAACGGGCCGCTCGCCGACAGCATGGCCAACATCGCCTTCGATCGCACCGGCAAGGTGCTGTTCAGCGCCTCCT
ATGGCGGCAACAAGGTGGCGGTAAATCCGGTGCAGGCGAACGGCGTCGTCGCAGCGCCCAGCCAGGTGATCCCGACCGGC
CTGAACGCGCACGCCTTCCTGCCCTCGCCCGACAACCGCTTCGTGTTCGCGACCAATCTCGGCTCCGACCAGGTGCTCGG
CTTCGCCTTCGATGCCGCCGCGGGCACGCTGACGGCCAACGAGGCGCTGACGGTGAAAACGCCGGAGAAGTCCGGGCCGC
GCCACTTCATCTTCCACCCGAACGGCAAGTTCATCTATCTCCTGCACGAGCTCAACGCCGATCTCGCCGTCTATGCCTAT
GACGCTGAGAAGGGCAGCTGGACCGAGCAGCAGCGCACCACCACCCTGCCTGCAGGCTTCACCGGCAAGCCCTGGGCGGC
GGATCTTCATGCAACGCCTGATGGCCAATTCCTCTACGCCTCCGAGCGCGGCTCCAACACCCTGGCCGCGTTCAAGATCG
ATGCGGCCAGCGGGCGGCTGACGCTGATCGGCAGCGTGCCGACCGAGACCCAGCCGCGCGGCTTCGCCATCGATCCGGCG
GGGCGCTATCTCGCCGCCGTCGGCGAGGTGTCGAACGGCATGACGGTGTACAAGATCGACGCCGCGAGCGGGGCGCTGGA
GAAGGTGAAGTCCTTCGCCGTCGGCAAGAAGCCGAACTGGGTCGAGTTCGTCACCCTGCCGTGA

Upstream 100 bases:

>100_bases
AATACCCATCCCGCATCGATCGATCCGGAAACAGGCTTGGCCAAGCCTCGCAAACGACTTTAAGACCTCAACCAACAACA
TCACCAGAGGGGGAAACCAC

Downstream 100 bases:

>100_bases
GCTGCTGGGAGAGACCGGACCTTGCGGCATCCTTCGAGACGCGCGCCCGAGGGCGCGCTCCTCAGGATGAGGCCTGAGGG
TGCGGCGAGATCTGCTCACC

Product: hypothetical protein

Products: NA

Alternate protein names: 6-P-gluconolactonase [H]

Number of amino acids: Translated: 367; Mature: 367

Protein sequence:

>367_residues
MIRSGTIMAASFVLAAAATLAPRPGHAETYAYVGNADGNDISVFKFDAATGEMTPVQTAAFVGVEKPGSSTPLAVSPDKK
VLISGVRSQPFQAESFAIDAKTGQLSHIGNGPLADSMANIAFDRTGKVLFSASYGGNKVAVNPVQANGVVAAPSQVIPTG
LNAHAFLPSPDNRFVFATNLGSDQVLGFAFDAAAGTLTANEALTVKTPEKSGPRHFIFHPNGKFIYLLHELNADLAVYAY
DAEKGSWTEQQRTTTLPAGFTGKPWAADLHATPDGQFLYASERGSNTLAAFKIDAASGRLTLIGSVPTETQPRGFAIDPA
GRYLAAVGEVSNGMTVYKIDAASGALEKVKSFAVGKKPNWVEFVTLP

Sequences:

>Translated_367_residues
MIRSGTIMAASFVLAAAATLAPRPGHAETYAYVGNADGNDISVFKFDAATGEMTPVQTAAFVGVEKPGSSTPLAVSPDKK
VLISGVRSQPFQAESFAIDAKTGQLSHIGNGPLADSMANIAFDRTGKVLFSASYGGNKVAVNPVQANGVVAAPSQVIPTG
LNAHAFLPSPDNRFVFATNLGSDQVLGFAFDAAAGTLTANEALTVKTPEKSGPRHFIFHPNGKFIYLLHELNADLAVYAY
DAEKGSWTEQQRTTTLPAGFTGKPWAADLHATPDGQFLYASERGSNTLAAFKIDAASGRLTLIGSVPTETQPRGFAIDPA
GRYLAAVGEVSNGMTVYKIDAASGALEKVKSFAVGKKPNWVEFVTLP
>Mature_367_residues
MIRSGTIMAASFVLAAAATLAPRPGHAETYAYVGNADGNDISVFKFDAATGEMTPVQTAAFVGVEKPGSSTPLAVSPDKK
VLISGVRSQPFQAESFAIDAKTGQLSHIGNGPLADSMANIAFDRTGKVLFSASYGGNKVAVNPVQANGVVAAPSQVIPTG
LNAHAFLPSPDNRFVFATNLGSDQVLGFAFDAAAGTLTANEALTVKTPEKSGPRHFIFHPNGKFIYLLHELNADLAVYAY
DAEKGSWTEQQRTTTLPAGFTGKPWAADLHATPDGQFLYASERGSNTLAAFKIDAASGRLTLIGSVPTETQPRGFAIDPA
GRYLAAVGEVSNGMTVYKIDAASGALEKVKSFAVGKKPNWVEFVTLP

Specific function: Catalyzes the hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate [H]

COG id: COG2706

COG function: function code G; 3-carboxymuconate cyclase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cycloisomerase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1786983, Length=331, Percent_Identity=33.2326283987915, Blast_Score=189, Evalue=2e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022528
- InterPro:   IPR019405
- InterPro:   IPR011045
- InterPro:   IPR015943 [H]

Pfam domain/function: PF10282 DUF2394 [H]

EC number: =3.1.1.31 [H]

Molecular weight: Translated: 38384; Mature: 38384

Theoretical pI: Translated: 6.90; Mature: 6.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRSGTIMAASFVLAAAATLAPRPGHAETYAYVGNADGNDISVFKFDAATGEMTPVQTAA
CCCCCEEHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCEEE
FVGVEKPGSSTPLAVSPDKKVLISGVRSQPFQAESFAIDAKTGQLSHIGNGPLADSMANI
EEEECCCCCCCCEEECCCCEEEEECCCCCCCCCCEEEEECCCCCEEECCCCCCHHHHHHH
AFDRTGKVLFSASYGGNKVAVNPVQANGVVAAPSQVIPTGLNAHAFLPSPDNRFVFATNL
EECCCCCEEEEECCCCCEEEEEEEECCCEEECCCHHCCCCCCCEEECCCCCCCEEEEECC
GSDQVLGFAFDAAAGTLTANEALTVKTPEKSGPRHFIFHPNGKFIYLLHELNADLAVYAY
CCCCEEEEEEECCCCEEECCCEEEEECCCCCCCEEEEECCCCCEEEEEEECCCCEEEEEE
DAEKGSWTEQQRTTTLPAGFTGKPWAADLHATPDGQFLYASERGSNTLAAFKIDAASGRL
ECCCCCCCCHHCEEECCCCCCCCCCEEEEECCCCCCEEEEECCCCCEEEEEEEECCCCCE
TLIGSVPTETQPRGFAIDPAGRYLAAVGEVSNGMTVYKIDAASGALEKVKSFAVGKKPNW
EEEECCCCCCCCCCEEECCCCCEEEEEECCCCCEEEEEEECCCCHHHHHHHHHCCCCCCE
VEFVTLP
EEEEECC
>Mature Secondary Structure
MIRSGTIMAASFVLAAAATLAPRPGHAETYAYVGNADGNDISVFKFDAATGEMTPVQTAA
CCCCCEEHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCEEE
FVGVEKPGSSTPLAVSPDKKVLISGVRSQPFQAESFAIDAKTGQLSHIGNGPLADSMANI
EEEECCCCCCCCEEECCCCEEEEECCCCCCCCCCEEEEECCCCCEEECCCCCCHHHHHHH
AFDRTGKVLFSASYGGNKVAVNPVQANGVVAAPSQVIPTGLNAHAFLPSPDNRFVFATNL
EECCCCCEEEEECCCCCEEEEEEEECCCEEECCCHHCCCCCCCEEECCCCCCCEEEEECC
GSDQVLGFAFDAAAGTLTANEALTVKTPEKSGPRHFIFHPNGKFIYLLHELNADLAVYAY
CCCCEEEEEEECCCCEEECCCEEEEECCCCCCCEEEEECCCCCEEEEEEECCCCEEEEEE
DAEKGSWTEQQRTTTLPAGFTGKPWAADLHATPDGQFLYASERGSNTLAAFKIDAASGRL
ECCCCCCCCHHCEEECCCCCCCCCCEEEEECCCCCCEEEEECCCCCEEEEEEEECCCCCE
TLIGSVPTETQPRGFAIDPAGRYLAAVGEVSNGMTVYKIDAASGALEKVKSFAVGKKPNW
EEEECCCCCCCCCCEEECCCCCEEEEEECCCCCEEEEEEECCCCHHHHHHHHHCCCCCCE
VEFVTLP
EEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA