| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146342615
Identifier: 146342615
GI number: 146342615
Start: 5981964
End: 5983172
Strand: Reverse
Name: 146342615
Synonym: BRADO5779
Alternate gene names: NA
Gene position: 5983172-5981964 (Counterclockwise)
Preceding gene: 146342618
Following gene: 146342614
Centisome position: 80.24
GC content: 67.0
Gene sequence:
>1209_bases ATGAACAGCCCAAGCCGGAACAGACCAAGCCGCGTCATCGGCTTCGTCAACGCGGCCCATTTCATCGACCATTATGCGAT GCTGATCTTCGCGGCCGCGGTCATCATCATGGGCCCGGCCCTGGGTATGGCCTATGCGGATTTGCTGCCCTACGCGACGC CGGGCTTCATCGCCTTCGGGGCCGGCGCGCTGCTGACTGGCTGGCTCGGCGACCGCTGGAGCCGGCGGCACATGATGCTG ATCTTCTATCTCGGCATTGGGCTATCGATGATCTCGGTTGGCCTGGTGCAGACGCCCTGGCAGCTCGGCGCGGCGCTGTT CGCGATCGGCCTGTTCGCCTCGATCTATCATCCGGTGGGAACCGCGATGCTGGTGTCCTATGCCGACCGTCTCGGCCGCG ATATGGGGCTGAACGGCGTGTTCGGCAATCTCGGCGTCGCCTCGTCGGCATTGGTGACCGGCGTGGTGGGGCAATATCTC GGCTGGCGCTTCGCCTTCATCGTGCCCGGGGTCATCACGATCGGCATCGGCGTGATCTTCGCGATGCTGGTCGCGCATGA GGATCGCCGCGGATCGAAGCAGGCGGCGGCGCAGGCGCGTGTCGCGCGCGAGCAGATGTGGCGCGTGGTGCTGGCGCTGC TGCTGGTGGTCATCGCGATCTCCACGACGTTCAACGCGATCACCGTGGCGCTGCCAAAGCTGTTCGCGGAGCGGCTTTCA GGGCTGACGCAAAGCCCGGCGCTGCTGGGCGTGATCGCGGCGTGCGTCTACGTCTTCGGCGCGATGACGCAGTACACAAT CGGCCGCTTGCTCGATCGCCACACGCTGAAAGCCGTCGCGCTGCCGCTCTCGCTGATGCTGGCGCCGCTGCTCTATCTCG CCGCCGATGCGCGCGACGGGGCACTGATCGTGGCCTCGATCGGGATCGTCATGGGCGCGTTCGGTCAGGTGACCGTCAAT GACGCGATGGTCGGCAAATACACCGCCGAGGAGTGGCGCTCGCGCGCCTATGCGGTGCGCTACTTCGTCGGCTTCACGGC AGCCGGCGCCTCGATCGGCCTGGTCGCGTGGCTGTATGAGCGCGGCGGCTTCGTCACCATGCTGCAGGCCTTCGCGGCGC TTGCCCTGGTCGCGATCATCGCCGCGCTGATCTTGCCGCCGGAGCTGCCCGCGAAGCGGCCGGCGTTGCGGGAGGCACCG GCGGAGTGA
Upstream 100 bases:
>100_bases GCGCCGAGCGGCTTCAATGGCGTGTCCACGATGGTCATTGGCGGCTTCTCGTTGGGGCGAGCCAGTATAACCGATTTATC CGGGAATCGAGGACACGCTC
Downstream 100 bases:
>100_bases GAACGAGGCGCTTGCTTTGGACGGTCCGCACGTCATGATGTCCACCAACACAACGGGGAGGGAACGATGGGCCGGTGGCG CGGGCTGCTCGTGGCGGCGC
Product: major facilitator superfamily permease
Products: NA
Alternate protein names: Facilitator Superfamily Permease; Facilitator Superfamily Protein; Facilitator Superfamily Transporter; Multidrug Resistance Protein; MFS Family Transporter
Number of amino acids: Translated: 402; Mature: 402
Protein sequence:
>402_residues MNSPSRNRPSRVIGFVNAAHFIDHYAMLIFAAAVIIMGPALGMAYADLLPYATPGFIAFGAGALLTGWLGDRWSRRHMML IFYLGIGLSMISVGLVQTPWQLGAALFAIGLFASIYHPVGTAMLVSYADRLGRDMGLNGVFGNLGVASSALVTGVVGQYL GWRFAFIVPGVITIGIGVIFAMLVAHEDRRGSKQAAAQARVAREQMWRVVLALLLVVIAISTTFNAITVALPKLFAERLS GLTQSPALLGVIAACVYVFGAMTQYTIGRLLDRHTLKAVALPLSLMLAPLLYLAADARDGALIVASIGIVMGAFGQVTVN DAMVGKYTAEEWRSRAYAVRYFVGFTAAGASIGLVAWLYERGGFVTMLQAFAALALVAIIAALILPPELPAKRPALREAP AE
Sequences:
>Translated_402_residues MNSPSRNRPSRVIGFVNAAHFIDHYAMLIFAAAVIIMGPALGMAYADLLPYATPGFIAFGAGALLTGWLGDRWSRRHMML IFYLGIGLSMISVGLVQTPWQLGAALFAIGLFASIYHPVGTAMLVSYADRLGRDMGLNGVFGNLGVASSALVTGVVGQYL GWRFAFIVPGVITIGIGVIFAMLVAHEDRRGSKQAAAQARVAREQMWRVVLALLLVVIAISTTFNAITVALPKLFAERLS GLTQSPALLGVIAACVYVFGAMTQYTIGRLLDRHTLKAVALPLSLMLAPLLYLAADARDGALIVASIGIVMGAFGQVTVN DAMVGKYTAEEWRSRAYAVRYFVGFTAAGASIGLVAWLYERGGFVTMLQAFAALALVAIIAALILPPELPAKRPALREAP AE >Mature_402_residues MNSPSRNRPSRVIGFVNAAHFIDHYAMLIFAAAVIIMGPALGMAYADLLPYATPGFIAFGAGALLTGWLGDRWSRRHMML IFYLGIGLSMISVGLVQTPWQLGAALFAIGLFASIYHPVGTAMLVSYADRLGRDMGLNGVFGNLGVASSALVTGVVGQYL GWRFAFIVPGVITIGIGVIFAMLVAHEDRRGSKQAAAQARVAREQMWRVVLALLLVVIAISTTFNAITVALPKLFAERLS GLTQSPALLGVIAACVYVFGAMTQYTIGRLLDRHTLKAVALPLSLMLAPLLYLAADARDGALIVASIGIVMGAFGQVTVN DAMVGKYTAEEWRSRAYAVRYFVGFTAAGASIGLVAWLYERGGFVTMLQAFAALALVAIIAALILPPELPAKRPALREAP AE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42776; Mature: 42776
Theoretical pI: Translated: 10.11; Mature: 10.11
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSPSRNRPSRVIGFVNAAHFIDHYAMLIFAAAVIIMGPALGMAYADLLPYATPGFIAFG CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH AGALLTGWLGDRWSRRHMMLIFYLGIGLSMISVGLVQTPWQLGAALFAIGLFASIYHPVG HHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH TAMLVSYADRLGRDMGLNGVFGNLGVASSALVTGVVGQYLGWRFAFIVPGVITIGIGVIF HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AMLVAHEDRRGSKQAAAQARVAREQMWRVVLALLLVVIAISTTFNAITVALPKLFAERLS HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GLTQSPALLGVIAACVYVFGAMTQYTIGRLLDRHTLKAVALPLSLMLAPLLYLAADARDG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC ALIVASIGIVMGAFGQVTVNDAMVGKYTAEEWRSRAYAVRYFVGFTAAGASIGLVAWLYE EEHHHHHHHHHHCCCCEEECCHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH RGGFVTMLQAFAALALVAIIAALILPPELPAKRPALREAPAE CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNSPSRNRPSRVIGFVNAAHFIDHYAMLIFAAAVIIMGPALGMAYADLLPYATPGFIAFG CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH AGALLTGWLGDRWSRRHMMLIFYLGIGLSMISVGLVQTPWQLGAALFAIGLFASIYHPVG HHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH TAMLVSYADRLGRDMGLNGVFGNLGVASSALVTGVVGQYLGWRFAFIVPGVITIGIGVIF HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AMLVAHEDRRGSKQAAAQARVAREQMWRVVLALLLVVIAISTTFNAITVALPKLFAERLS HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GLTQSPALLGVIAACVYVFGAMTQYTIGRLLDRHTLKAVALPLSLMLAPLLYLAADARDG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC ALIVASIGIVMGAFGQVTVNDAMVGKYTAEEWRSRAYAVRYFVGFTAAGASIGLVAWLYE EEHHHHHHHHHHCCCCEEECCHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH RGGFVTMLQAFAALALVAIIAALILPPELPAKRPALREAPAE CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA