| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146342614
Identifier: 146342614
GI number: 146342614
Start: 5981100
End: 5981897
Strand: Reverse
Name: 146342614
Synonym: BRADO5778
Alternate gene names: NA
Gene position: 5981897-5981100 (Counterclockwise)
Preceding gene: 146342615
Following gene: 146342612
Centisome position: 80.22
GC content: 67.29
Gene sequence:
>798_bases ATGGGCCGGTGGCGCGGGCTGCTCGTGGCGGCGCTGGCCGTCGTGGCGAGCATGATGACATCATCTCACGGCGGAGCCGC CGAGCTGAAGGACGAGATCGCGCCCACCGGCAAGCTGCGCGTGGCGATCGCGATCAGCCCCGCGGGCGGCGCGTTCTGGT CGACCAGGACCGAGACCGGCTATTCCGGCGTCCCCGTCGATCTCGGCCGCGCGATGGCCGACAGGCTCGGTGTGCCCGTC GACTACGTCGTGCACCAGAACTCCGGCCAGATCACCGATGCGGCCGACAAGGGCACCTGGGATGTGACGTTCCTGCCGAA GGATCCGGAGCGCGAGACCAGGATGGCGTTCGGCCCGATCTACGAGGTCGCGGATGCGACCTACATCGTCAAGCCGGGCT CGCCGGTAACGAGCTTTTCGGCCCTCGACCAGCCGGGCATCAAGGTCGCGGCCGTGAACAACACGACGACGATGCGCGGC GCCAAGGCGCATCTGAAGAACGCCAGCGTCACCGGCTATCAGACCTATGACGAGATCTTCGGCCTGCTGCAGCGAGGCGA GATCGATGCCTTCGCCCTGTCGCGCGACCAGCTCGACGCGATGGCCAGGAAGATCCCGGGCACGCGGGTGCTCGACGAGA CCTTCAAGAAGACGGTGACGGCGGTGGCTGTCCCGCTCGGGCATGACAAGGCGCTGGCCTTCGTCAGCAGCTTCATGACC GACGCGGCCTCGAACGGGCTGCTGCGCAAGGCTTACGACGCCAACGGATTGAAGGAGACGCCGCTGCGAACGCAGTAG
Upstream 100 bases:
>100_bases GCGGCCGGCGTTGCGGGAGGCACCGGCGGAGTGAGAACGAGGCGCTTGCTTTGGACGGTCCGCACGTCATGATGTCCACC AACACAACGGGGAGGGAACG
Downstream 100 bases:
>100_bases CAGCACCGCCATCGGCCCGAGCAGCGACAGCGGCACCGCGAGGATGACTGAGACCGGCGCGTACCAGCTTTCATACTGGC CGGCGAGCACGAGATAGACG
Product: putative periplasmic-binding protein amino-acid periplasmic-binding protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 265; Mature: 264
Protein sequence:
>265_residues MGRWRGLLVAALAVVASMMTSSHGGAAELKDEIAPTGKLRVAIAISPAGGAFWSTRTETGYSGVPVDLGRAMADRLGVPV DYVVHQNSGQITDAADKGTWDVTFLPKDPERETRMAFGPIYEVADATYIVKPGSPVTSFSALDQPGIKVAAVNNTTTMRG AKAHLKNASVTGYQTYDEIFGLLQRGEIDAFALSRDQLDAMARKIPGTRVLDETFKKTVTAVAVPLGHDKALAFVSSFMT DAASNGLLRKAYDANGLKETPLRTQ
Sequences:
>Translated_265_residues MGRWRGLLVAALAVVASMMTSSHGGAAELKDEIAPTGKLRVAIAISPAGGAFWSTRTETGYSGVPVDLGRAMADRLGVPV DYVVHQNSGQITDAADKGTWDVTFLPKDPERETRMAFGPIYEVADATYIVKPGSPVTSFSALDQPGIKVAAVNNTTTMRG AKAHLKNASVTGYQTYDEIFGLLQRGEIDAFALSRDQLDAMARKIPGTRVLDETFKKTVTAVAVPLGHDKALAFVSSFMT DAASNGLLRKAYDANGLKETPLRTQ >Mature_264_residues GRWRGLLVAALAVVASMMTSSHGGAAELKDEIAPTGKLRVAIAISPAGGAFWSTRTETGYSGVPVDLGRAMADRLGVPVD YVVHQNSGQITDAADKGTWDVTFLPKDPERETRMAFGPIYEVADATYIVKPGSPVTSFSALDQPGIKVAAVNNTTTMRGA KAHLKNASVTGYQTYDEIFGLLQRGEIDAFALSRDQLDAMARKIPGTRVLDETFKKTVTAVAVPLGHDKALAFVSSFMTD AASNGLLRKAYDANGLKETPLRTQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28234; Mature: 28103
Theoretical pI: Translated: 8.76; Mature: 8.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRWRGLLVAALAVVASMMTSSHGGAAELKDEIAPTGKLRVAIAISPAGGAFWSTRTETG CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCEEEEEEEECCCCCEECCCCCCC YSGVPVDLGRAMADRLGVPVDYVVHQNSGQITDAADKGTWDVTFLPKDPERETRMAFGPI CCCCCHHHHHHHHHHHCCCEEEEEECCCCCEEECCCCCCEEEEECCCCCCHHHHHHHCCH YEVADATYIVKPGSPVTSFSALDQPGIKVAAVNNTTTMRGAKAHLKNASVTGYQTYDEIF HHHCCCEEEECCCCCCCHHHHCCCCCEEEEEECCCCCCCCHHHHHCCCCCCCCCCHHHHH GLLQRGEIDAFALSRDQLDAMARKIPGTRVLDETFKKTVTAVAVPLGHDKALAFVSSFMT HHHHCCCCCEEEECHHHHHHHHHHCCCCHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHH DAASNGLLRKAYDANGLKETPLRTQ HHHCCCCEEECCCCCCCCCCCCCCC >Mature Secondary Structure GRWRGLLVAALAVVASMMTSSHGGAAELKDEIAPTGKLRVAIAISPAGGAFWSTRTETG CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCEEEEEEEECCCCCEECCCCCCC YSGVPVDLGRAMADRLGVPVDYVVHQNSGQITDAADKGTWDVTFLPKDPERETRMAFGPI CCCCCHHHHHHHHHHHCCCEEEEEECCCCCEEECCCCCCEEEEECCCCCCHHHHHHHCCH YEVADATYIVKPGSPVTSFSALDQPGIKVAAVNNTTTMRGAKAHLKNASVTGYQTYDEIF HHHCCCEEEECCCCCCCHHHHCCCCCEEEEEECCCCCCCCHHHHHCCCCCCCCCCHHHHH GLLQRGEIDAFALSRDQLDAMARKIPGTRVLDETFKKTVTAVAVPLGHDKALAFVSSFMT HHHHCCCCCEEEECHHHHHHHHHHCCCCHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHH DAASNGLLRKAYDANGLKETPLRTQ HHHCCCCEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA